RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 LIPKQ5VXJ0 399 aa7.47□□□□□ -1.21
CAPN3-219ENST00000569136 HCP5Q6MZN7 132 aa7.47□□□□□ -1.21
CAPN3-219ENST00000569136 GLIPR1L1Q6UWM5 242 aa7.47□□□□□ -1.21
CAPN3-219ENST00000569136 HEPN1Q6WQI6 88 aa7.47□□□□□ -1.21
CAPN3-219ENST00000569136 TRAPPC6BQ86SZ2 158 aa7.47□□□□□ -1.21
CAPN3-219ENST00000569136 PNKDQ8N490 385 aa7.47□□□□□ -1.21
CAPN3-219ENST00000569136 C3orf56Q8N813 242 aa7.47□□□□□ -1.21
CAPN3-219ENST00000569136 OR4D6Q8NGJ1 314 aa7.47□□□□□ -1.21
CAPN3-219ENST00000569136 C1orf147Q96MC9 270 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-219ENST00000569136 TMED9Q9BVK6 235 aa7.47□□□□□ -1.21
CAPN3-219ENST00000569136 DPCDQ9BVM2 203 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-219ENST00000569136 MRPS28Q9Y2Q9 187 aaKnown RBP7.47□□□□□ -1.21
CAPN3-219ENST00000569136 TBL2Q9Y4P3 447 aaKnown RBP7.47□□□□□ -1.21
CAPN3-219ENST00000569136 MMP24Q9Y5R2 645 aa7.47□□□□□ -1.21
CAPN3-219ENST00000569136 SESN1Q9Y6P5 492 aa7.47□□□□□ -1.21
CAPN3-219ENST00000569136 MINOS1-NBL1R4GNA1 71 aa7.47□□□□□ -1.21
CAPN3-219ENST00000569136 DNHD1Q96M86 4753 aa7.47□□□□□ -1.21
CAPN3-219ENST00000569136 KBTBD11-OT1A0A1B0GTJ5 212 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 ZNF729A6NN14 1252 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-219ENST00000569136 CA11O75493 328 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 SC5DO75845 299 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 OR7C1O76099 320 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-219ENST00000569136 NDUFA7O95182 113 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 UCHL1P09936 223 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 FUT3P21217 361 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 GLIPR1P48060 266 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 PRRX1P54821 245 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 RBM11P57052 281 aaKnown RBP7.46□□□□□ -1.22
CAPN3-219ENST00000569136 GABARAPL2P60520 117 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 TBCEQ15813 527 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-219ENST00000569136 C1orf100Q5SVJ3 147 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 SLC35E4Q6ICL7 350 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 SLC16A12Q6ZSM3 486 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 ZNF367Q7RTV3 350 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 LYPD6Q86Y78 171 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 SUMF2Q8NBJ7 301 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 OR10A7Q8NGE5 316 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 OR10K1Q8NGX5 313 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 OR4F5Q8NH21 305 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 ZNF596Q8TC21 504 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 SGCDQ92629 289 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 MUL1Q969V5 352 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 ORAI1Q96D31 301 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 DUX5Q96PT3 197 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 CHIAQ9BZP6 476 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 CST11Q9H112 138 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 TMEM133Q9H2Q1 129 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 PPA2Q9H2U2 334 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 LINC00574Q9H8X3 128 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 BEX1Q9HBH7 125 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 RAB18Q9NP72 206 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 RAB9BQ9NP90 201 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 RRP15Q9Y3B9 282 aaKnown RBP7.46□□□□□ -1.22
CAPN3-219ENST00000569136 CUBNO60494 3623 aa7.46□□□□□ -1.22
CAPN3-219ENST00000569136 MEIKINA0A087WXM9 373 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 MDFIC2A0A1B0GVS7 189 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 A0A1W2PRD5 423 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 A0A1W2PRF3 423 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 A0A1W2PRM7 423 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 VGLL3A8MV65 326 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 MCRIP1C9JLW8 97 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 GEMIN2O14893 280 aaKnown RBP7.45□□□□□ -1.22
CAPN3-219ENST00000569136 CLPXO76031 633 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 IGHV4-59P01825 116 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 ARG1P05089 322 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 LPLP06858 475 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 CGB3P0DN86 165 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 CGB7P0DN87 165 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 SERPINA2P20848 420 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 GALP22466 123 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 COX7A1P24310 79 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 CDK2P24941 298 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 GABRA5P31644 462 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 EMX1Q04741 257 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-219ENST00000569136 KLRD1Q13241 179 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 DYNC1I2Q13409 638 aaKnown RBP7.45□□□□□ -1.22
CAPN3-219ENST00000569136 RNF151Q2KHN1 245 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 PIGYQ3MUY2 71 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 ATAD3CQ5T2N8 411 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 ZNF626Q68DY1 528 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 AWAT2Q6E213 333 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 ZNF782Q6ZMW2 699 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-219ENST00000569136 LRRTM1Q86UE6 522 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 ABHD12Q8N2K0 398 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 TPRX1Q8N7U7 411 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 KCNG3Q8TAE7 436 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 FCGR1BQ92637 280 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 TMEM203Q969S6 136 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 COQ2Q96H96 371 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 C20orf173Q96LM9 149 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 SSX3Q99909 188 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 ZNF747Q9BV97 191 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 CLEC7AQ9BXN2 247 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 ZNRD1Q9P1U0 126 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 DPM3Q9P2X0 92 aa7.45□□□□□ -1.22
CAPN3-219ENST00000569136 A0A087X0M5 115 aa7.44□□□□□ -1.22
CAPN3-219ENST00000569136 IGHV2-26A0A0B4J1V2 119 aa7.44□□□□□ -1.22
CAPN3-219ENST00000569136 A0A1B0GX30 115 aa7.44□□□□□ -1.22
CAPN3-219ENST00000569136 TMEM30CPA0ZSE6 113 aa7.44□□□□□ -1.22
CAPN3-219ENST00000569136 ODF3BA8MYP8 253 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms