RNA–Protein interactions for RNA: ENST00000568329.5

CSK-211, Transcript of C-terminal Src kinase, human

TSL 5

Gene CSK, Length 1,552 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSK-211	ENST00000568329	COL8A2	P25067	703 aa		12.83	□□□□□ -0.36
CSK-211	ENST00000568329	FPR2	P25090	351 aa		12.83	□□□□□ -0.36
CSK-211	ENST00000568329	EFNA4	P52798	201 aa		12.83	□□□□□ -0.36
CSK-211	ENST00000568329	TMEM33	P57088	247 aa		12.83	□□□□□ -0.36
CSK-211	ENST00000568329	SEC61A1	P61619	476 aa	Known RBP	12.83	□□□□□ -0.36
CSK-211	ENST00000568329	RAB1C	Q92928	201 aa		12.83	□□□□□ -0.36
CSK-211	ENST00000568329	CCL13	Q99616	98 aa		12.83	□□□□□ -0.36
CSK-211	ENST00000568329	ZNF2	Q9BSG1	426 aa	Predicted RBP	12.83	□□□□□ -0.36
CSK-211	ENST00000568329	GPN1	Q9HCN4	374 aa	Predicted RBP	12.83	□□□□□ -0.36
CSK-211	ENST00000568329	ING3	Q9NXR8	418 aa		12.83	□□□□□ -0.36
CSK-211	ENST00000568329	LRBA	P50851	2863 aa		12.83	□□□□□ -0.36
CSK-211	ENST00000568329	GCN1	Q92616	2671 aa	Known RBP	12.83	□□□□□ -0.36
CSK-211	ENST00000568329	C7orf66	A4D0T2	115 aa		12.82	□□□□□ -0.36
CSK-211	ENST00000568329	TNFRSF13B	O14836	293 aa	Predicted RBP	12.82	□□□□□ -0.36
CSK-211	ENST00000568329	IL5	P05113	134 aa		12.82	□□□□□ -0.36
CSK-211	ENST00000568329	SCT	P09683	121 aa		12.82	□□□□□ -0.36
CSK-211	ENST00000568329	EDDM3A	Q14507	147 aa		12.82	□□□□□ -0.36
CSK-211	ENST00000568329	CR1L	Q2VPA4	569 aa		12.82	□□□□□ -0.36
CSK-211	ENST00000568329	LRRC10	Q5BKY1	277 aa		12.82	□□□□□ -0.36
CSK-211	ENST00000568329	METTL11B	Q5VVY1	283 aa		12.82	□□□□□ -0.36
CSK-211	ENST00000568329	ZNF660	Q6AZW8	331 aa	Predicted RBP	12.82	□□□□□ -0.36
CSK-211	ENST00000568329	ZNF787	Q6DD87	383 aa		12.82	□□□□□ -0.36
CSK-211	ENST00000568329	FAHD2B	Q6P2I3	314 aa	Predicted RBP	12.82	□□□□□ -0.36
CSK-211	ENST00000568329	OR10J5	Q8NHC4	309 aa		12.82	□□□□□ -0.36
CSK-211	ENST00000568329	GALM	Q96C23	342 aa		12.82	□□□□□ -0.36
CSK-211	ENST00000568329	FAHD2A	Q96GK7	314 aa		12.82	□□□□□ -0.36
CSK-211	ENST00000568329	TAF9B	Q9HBM6	251 aa		12.82	□□□□□ -0.36
CSK-211	ENST00000568329	LPAR3	Q9UBY5	353 aa		12.82	□□□□□ -0.36
CSK-211	ENST00000568329	SLC23A1	Q9UHI7	598 aa		12.82	□□□□□ -0.36
CSK-211	ENST00000568329	ADAM20	O43506	726 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	NDUFB3	O43676	98 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	IGHV2-70	P01814	119 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	TFF1	P04155	84 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	FCGR2C	P31995	323 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	GLIPR1	P48060	266 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	EDDM3B	P56851	147 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	RAB25	P57735	213 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	TAS2R31	P59538	309 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	UBE2M	P61081	183 aa	Known RBP	12.81	□□□□□ -0.36
CSK-211	ENST00000568329	HERV-K104	P61576	105 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	TMEM155	Q4W5P6	130 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	IGSF11	Q5DX21	431 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	AADACL3	Q5VUY0	350 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	FAM216B	Q8N7L0	139 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	ZFAND1	Q8TCF1	268 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	TMEM246	Q9BRR3	403 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	SLC25A10	Q9UBX3	287 aa	Predicted RBP	12.81	□□□□□ -0.36
CSK-211	ENST00000568329	FLVCR2	Q9UPI3	526 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	TRBV6-7	A0A0A0MS04	114 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	LYNX1	G3V0Z9	82 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	GPR37	O15354	613 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	SPINT2	O43291	252 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	NDUFS7	O75251	213 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	LY6H	O94772	140 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	LYNX1	P0DP58	116 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	UCP3	P55916	312 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	MEF2C	Q06413	473 aa	Predicted RBP	12.81	□□□□□ -0.36
CSK-211	ENST00000568329	HERPUD1	Q15011	391 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	LPCAT3	Q6P1A2	487 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	CADM3	Q8N126	398 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	SPIC	Q8N5J4	248 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	MOB3A	Q96BX8	217 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	KIRREL1	Q96J84	757 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	LIME1	Q9H400	295 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	ALG5	Q9Y673	324 aa		12.81	□□□□□ -0.36
CSK-211	ENST00000568329	TRGV10	A0A0A0MS01	117 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329		A0A0B4J293	547 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	SNRPGP15	A8MWD9	76 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	C12orf77	C9JDV5	145 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	BET1	O15155	118 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	HSPA12A	O43301	675 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	PPY	P01298	95 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	TRAPPC2	P0DI81	140 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	TRAPPC2B	P0DI82	140 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	ZBTB25	P24278	435 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	IL2RG	P31785	369 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	NPY4R	P50391	375 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	TMEM30B	Q3MIR4	351 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	HIST2H2BC	Q6DN03	193 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	GLDN	Q6ZMI3	551 aa	Predicted RBP	12.8	□□□□□ -0.36
CSK-211	ENST00000568329	NLRC3	Q7RTR2	1065 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	MARCH1	Q8TCQ1	289 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	MRGPRD	Q8TDS7	321 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	FAM216A	Q8WUB2	273 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	CHAC2	Q8WUX2	184 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	IL1F10	Q8WWZ1	152 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	NRGN	Q92686	78 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	MRGPRF	Q96AM1	343 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	MIOX	Q9UGB7	285 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	GPR132	Q9UNW8	380 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	C14orf166	Q9Y224	244 aa	Known RBP	12.8	□□□□□ -0.36
CSK-211	ENST00000568329	VSIG4	Q9Y279	399 aa		12.8	□□□□□ -0.36
CSK-211	ENST00000568329	hADV38S2	A0JD32	116 aa		12.79	□□□□□ -0.36
CSK-211	ENST00000568329	FAM172BP	A6NC97	362 aa		12.79	□□□□□ -0.36
CSK-211	ENST00000568329	OR5H14	A6NHG9	310 aa		12.79	□□□□□ -0.36
CSK-211	ENST00000568329	PPIH	O43447	177 aa	Known RBP	12.79	□□□□□ -0.36
CSK-211	ENST00000568329	PFDN1	O60925	122 aa		12.79	□□□□□ -0.36
CSK-211	ENST00000568329	TUSC2	O75896	110 aa		12.79	□□□□□ -0.36
CSK-211	ENST00000568329	PGAM2	P15259	253 aa		12.79	□□□□□ -0.36
CSK-211	ENST00000568329	PAX1	P15863	534 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms