RNA–Protein interactions for RNA: ENST00000568139.5

CLK3-221, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-221ENST00000568139 PIGYQ3MUY2 71 aa13.73□□□□□ -0.21
CLK3-221ENST00000568139 SLC25A30Q5SVS4 291 aa13.73□□□□□ -0.21
CLK3-221ENST00000568139 ASCL4Q6XD76 172 aa13.73□□□□□ -0.21
CLK3-221ENST00000568139 OR11H1Q8NG94 326 aa13.73□□□□□ -0.21
CLK3-221ENST00000568139 OR8H1Q8NGG4 311 aa13.73□□□□□ -0.21
CLK3-221ENST00000568139 MYOZ3Q8TDC0 251 aa13.73□□□□□ -0.21
CLK3-221ENST00000568139 RTN4IP1Q8WWV3 396 aaPredicted RBP13.73□□□□□ -0.21
CLK3-221ENST00000568139 RNFT2Q96EX2 444 aa13.73□□□□□ -0.21
CLK3-221ENST00000568139 HSPB9Q9BQS6 159 aa13.73□□□□□ -0.21
CLK3-221ENST00000568139 HUWE1Q7Z6Z7 4374 aaKnown RBP13.72□□□□□ -0.21
CLK3-221ENST00000568139 C15orf65H3BRN8 121 aa13.72□□□□□ -0.21
CLK3-221ENST00000568139 GABRPO00591 440 aa13.72□□□□□ -0.21
CLK3-221ENST00000568139 IGF1P05019 195 aa13.72□□□□□ -0.21
CLK3-221ENST00000568139 RPSAP08865 295 aaKnown RBP13.72□□□□□ -0.21
CLK3-221ENST00000568139 VDAC1P21796 283 aa13.72□□□□□ -0.21
CLK3-221ENST00000568139 ZNF529Q6P280 563 aa13.72□□□□□ -0.21
CLK3-221ENST00000568139 SBSPONQ8IVN8 264 aa13.72□□□□□ -0.21
CLK3-221ENST00000568139 FAM71E2Q8N5Q1 922 aa13.72□□□□□ -0.21
CLK3-221ENST00000568139 ACBD7Q8N6N7 88 aa13.72□□□□□ -0.21
CLK3-221ENST00000568139 SUMF2Q8NBJ7 301 aa13.72□□□□□ -0.21
CLK3-221ENST00000568139 DPCDQ9BVM2 203 aaPredicted RBP13.72□□□□□ -0.21
CLK3-221ENST00000568139 IFT22Q9H7X7 185 aa13.72□□□□□ -0.21
CLK3-221ENST00000568139 ZNF581Q9P0T4 197 aa13.72□□□□□ -0.21
CLK3-221ENST00000568139 EXOGQ9Y2C4 368 aaKnown RBP13.72□□□□□ -0.21
CLK3-221ENST00000568139 AP4S1Q9Y587 144 aa13.72□□□□□ -0.21
CLK3-221ENST00000568139 ZNF736B4DX44 427 aaPredicted RBP13.71□□□□□ -0.21
CLK3-221ENST00000568139 F2RL1P55085 397 aa13.71□□□□□ -0.21
CLK3-221ENST00000568139 KIAA0141Q14154 515 aaPredicted RBP13.71□□□□□ -0.21
CLK3-221ENST00000568139 LPCAT4Q643R3 524 aa13.71□□□□□ -0.21
CLK3-221ENST00000568139 OR10K1Q8NGX5 313 aa13.71□□□□□ -0.21
CLK3-221ENST00000568139 TNFAIP8L1Q8WVP5 186 aa13.71□□□□□ -0.21
CLK3-221ENST00000568139 ARL11Q969Q4 196 aa13.71□□□□□ -0.21
CLK3-221ENST00000568139 CPNE2Q96FN4 548 aaPredicted RBP13.71□□□□□ -0.21
CLK3-221ENST00000568139 KCTD7Q96MP8 289 aa13.71□□□□□ -0.21
CLK3-221ENST00000568139 RCHY1Q96PM5 261 aa13.71□□□□□ -0.21
CLK3-221ENST00000568139 GFOD1Q9NXC2 390 aa13.71□□□□□ -0.21
CLK3-221ENST00000568139 DYNC2H1Q8NCM8 4307 aaKnown RBP13.71□□□□□ -0.22
CLK3-221ENST00000568139 RYR2Q92736 4967 aa13.7□□□□□ -0.22
CLK3-221ENST00000568139 I3L521 148 aa13.7□□□□□ -0.22
CLK3-221ENST00000568139 SDCBPO00560 298 aaPredicted RBP13.7□□□□□ -0.22
CLK3-221ENST00000568139 LY86O95711 162 aa13.7□□□□□ -0.22
CLK3-221ENST00000568139 OR8U8P0C7N1 319 aa13.7□□□□□ -0.22
CLK3-221ENST00000568139 IL3RAP26951 378 aa13.7□□□□□ -0.22
CLK3-221ENST00000568139 SOX6P35712 828 aa13.7□□□□□ -0.22
CLK3-221ENST00000568139 RUNX1Q01196 453 aa13.7□□□□□ -0.22
CLK3-221ENST00000568139 GALEQ14376 348 aa13.7□□□□□ -0.22
CLK3-221ENST00000568139 RSU1Q15404 277 aa13.7□□□□□ -0.22
CLK3-221ENST00000568139 Q3ZCU0 254 aa13.7□□□□□ -0.22
CLK3-221ENST00000568139 NHLRC3Q5JS37 347 aa13.7□□□□□ -0.22
CLK3-221ENST00000568139 ASPHD1Q5U4P2 390 aa13.7□□□□□ -0.22
CLK3-221ENST00000568139 FAM53AQ6NSI3 398 aaPredicted RBP13.7□□□□□ -0.22
CLK3-221ENST00000568139 SATL1Q86VE3 508 aa13.7□□□□□ -0.22
CLK3-221ENST00000568139 MRPL48Q96GC5 212 aaKnown RBP13.7□□□□□ -0.22
CLK3-221ENST00000568139 UBE2E2Q96LR5 201 aa13.7□□□□□ -0.22
CLK3-221ENST00000568139 GPER1Q99527 375 aa13.7□□□□□ -0.22
CLK3-221ENST00000568139 CHCHD6Q9BRQ6 235 aa13.7□□□□□ -0.22
CLK3-221ENST00000568139 IMPAD1Q9NX62 359 aa13.7□□□□□ -0.22
CLK3-221ENST00000568139 DHDHQ9UQ10 334 aa13.7□□□□□ -0.22
CLK3-221ENST00000568139 DNAH7Q8WXX0 4024 aa13.7□□□□□ -0.22
CLK3-221ENST00000568139 TMEM30CPA0ZSE6 113 aa13.69□□□□□ -0.22
CLK3-221ENST00000568139 TMEM212A6NML5 194 aa13.69□□□□□ -0.22
CLK3-221ENST00000568139 MAGEB3O15480 346 aa13.69□□□□□ -0.22
CLK3-221ENST00000568139 ORC5O43913 435 aa13.69□□□□□ -0.22
CLK3-221ENST00000568139 HTR3BO95264 441 aa13.69□□□□□ -0.22
CLK3-221ENST00000568139 OR5H8P0DN80 308 aa13.69□□□□□ -0.22
CLK3-221ENST00000568139 FCGR1AP12314 374 aa13.69□□□□□ -0.22
CLK3-221ENST00000568139 RAB3AP20336 220 aa13.69□□□□□ -0.22
CLK3-221ENST00000568139 PPIFP30405 207 aaKnown RBP13.69□□□□□ -0.22
CLK3-221ENST00000568139 VHLP40337 213 aa13.69□□□□□ -0.22
CLK3-221ENST00000568139 ZNF137PP52743 207 aa13.69□□□□□ -0.22
CLK3-221ENST00000568139 SNRPGP62308 76 aaKnown RBP13.69□□□□□ -0.22
CLK3-221ENST00000568139 MEDAGQ5VYS4 303 aa13.69□□□□□ -0.22
CLK3-221ENST00000568139 SYS1Q8N2H4 156 aa13.69□□□□□ -0.22
CLK3-221ENST00000568139 ZNF491Q8N8L2 437 aa13.69□□□□□ -0.22
CLK3-221ENST00000568139 OR51A2Q8NGJ7 313 aa13.69□□□□□ -0.22
CLK3-221ENST00000568139 OR1N2Q8NGR9 330 aa13.69□□□□□ -0.22
CLK3-221ENST00000568139 OR5AK2Q8NH90 309 aa13.69□□□□□ -0.22
CLK3-221ENST00000568139 PDCD1LG2Q9BQ51 273 aa13.69□□□□□ -0.22
CLK3-221ENST00000568139 ALG8Q9BVK2 526 aa13.69□□□□□ -0.22
CLK3-221ENST00000568139 ISG20L2Q9H9L3 353 aaKnown RBP13.69□□□□□ -0.22
CLK3-221ENST00000568139 OAZ3Q9UMX2 235 aa13.69□□□□□ -0.22
CLK3-221ENST00000568139 ST3GAL6Q9Y274 331 aa13.69□□□□□ -0.22
CLK3-221ENST00000568139 IGHV3-43A0A0B4J1X8 118 aa13.68□□□□□ -0.22
CLK3-221ENST00000568139 TXNL1O43396 289 aa13.68□□□□□ -0.22
CLK3-221ENST00000568139 IGHV3-43DP0DP04 118 aa13.68□□□□□ -0.22
CLK3-221ENST00000568139 RBM11P57052 281 aaKnown RBP13.68□□□□□ -0.22
CLK3-221ENST00000568139 ZNF616Q08AN1 781 aa13.68□□□□□ -0.22
CLK3-221ENST00000568139 SLC25A48Q6ZT89 311 aaKnown RBP13.68□□□□□ -0.22
CLK3-221ENST00000568139 LHFPL3Q86UP9 236 aa13.68□□□□□ -0.22
CLK3-221ENST00000568139 ZNF429Q86V71 674 aa13.68□□□□□ -0.22
CLK3-221ENST00000568139 UBALD1Q8TB05 177 aa13.68□□□□□ -0.22
CLK3-221ENST00000568139 LGALS12Q96DT0 336 aa13.68□□□□□ -0.22
CLK3-221ENST00000568139 RBMXL1Q96E39 390 aaKnown RBP13.68□□□□□ -0.22
CLK3-221ENST00000568139 CENPNQ96H22 339 aaPredicted RBP13.68□□□□□ -0.22
CLK3-221ENST00000568139 MYCBPQ99417 103 aaPredicted RBP13.68□□□□□ -0.22
CLK3-221ENST00000568139 FAM192AQ9GZU8 254 aa13.68□□□□□ -0.22
CLK3-221ENST00000568139 KLK15Q9H2R5 256 aa13.68□□□□□ -0.22
CLK3-221ENST00000568139 GNB4Q9HAV0 340 aa13.68□□□□□ -0.22
CLK3-221ENST00000568139 IL36GQ9NZH8 169 aa13.68□□□□□ -0.22
CLK3-221ENST00000568139 E9PI62 339 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms