RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 ECH1Q13011 328 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 SLAMF1Q13291 335 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 ARFRP1Q13795 201 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 RHEBQ15382 184 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 OR8G1Q15617 311 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 PSMD5Q16401 504 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 NRF1Q16656 503 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 ARHGAP11BQ3KRB8 267 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 TMEM176BQ3YBM2 270 aaPredicted RBP2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 TFDP3Q5H9I0 405 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 AKR1C8PQ5T2L2 129 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 SDHAF4Q5VUM1 108 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 REEP3Q6NUK4 255 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 RNASEKQ6P5S7 137 aaKnown RBP2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 TMEM220Q6QAJ8 160 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 SMARCD3Q6STE5 483 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 UQCC3Q6UW78 93 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 IGFL3Q6UXB1 125 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 SSX6Q7RTT6 188 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 TMEM144Q7Z5S9 345 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 LYG2Q86SG7 212 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 FAM71AQ8IYT1 594 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 LGI3Q8N145 548 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 CLDN22Q8N7P3 220 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 Q8N9W7 124 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 CYB561A3Q8NBI2 242 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 FBXO36Q8NEA4 188 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 OR4E2Q8NGC2 313 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 OR10G3Q8NGC4 313 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 OR8J3Q8NGG0 315 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 CD200R1Q8TD46 325 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 TNFAIP8L1Q8WVP5 186 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 ASB17Q8WXJ9 295 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 TMEM234Q8WY98 164 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 ACOT12Q8WYK0 555 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 ARPC1AQ92747 370 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 ZNF707Q96C28 371 aaPredicted RBP2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 RCN3Q96D15 328 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 ASB9Q96DX5 294 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 PAGE5Q96GU1 130 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 RNF170Q96K19 258 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 C12orf42Q96LP6 360 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 ZFP3Q96NJ6 502 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 HIST1H4GQ99525 98 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 NPAS2Q99743 824 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 TMEM208Q9BTX3 173 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 PBDC1Q9BVG4 233 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 OR11A1Q9GZK7 315 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 CXorf21Q9HAI6 301 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 PLEKHJ1Q9NW61 149 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 AHSPQ9NZD4 102 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 ZNF223Q9UK11 482 aaPredicted RBP2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 MEMO1Q9Y316 297 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 RBM7Q9Y580 266 aaKnown RBP2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 PEX16Q9Y5Y5 336 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 ASH1LQ9NR48 2969 aaKnown RBP2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 FRYLO94915 3013 aa2.33□□□□□ -2.04
HERPUD1-212ENST00000567944 KCNE1BA0A087WTH5 132 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 TRBV11-1A0A0K0K1C0 115 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 TMEM72A0PK05 275 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 TMEM218A2RU14 115 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 TRAPPC13A5PLN9 417 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 EFCAB9A8MZ26 197 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 PPP5D1E7EU14 171 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 J3QR89 54 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 AIPO00170 330 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 COPEO14579 308 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 HMGB3O15347 200 aaKnown RBP2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 MAGEB4O15481 346 aaPredicted RBP2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 MBTPS2O43462 519 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 XRCC2O43543 280 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 KLRC4O43908 158 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 PDE6DO43924 150 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 RP2O75695 350 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 CNMDO75829 334 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 UPK1BO75841 260 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 UTS2O95399 124 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 ETHE1O95571 254 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 KLF8O95600 359 aaPredicted RBP2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 UCHL1P09936 223 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 GABRA1P14867 456 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 CRHBPP24387 322 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 CD82P27701 267 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 CASP1P29466 404 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 FMO3P31513 532 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 FOXN2P32314 431 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 SHMT2P34897 504 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 BTCP35070 178 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 PMELP40967 661 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 AKR1C3P42330 323 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 GYG1P46976 350 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 NPBWR2P48146 333 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 RAB7AP51149 207 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 DLX1P56177 255 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 CLDN18P56856 261 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 TAS2R19P59542 299 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 TPI1P60174 286 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 SELENOTP62341 195 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 IL5RAQ01344 420 aa2.32□□□□□ -2.04
HERPUD1-212ENST00000567944 PAX5Q02548 391 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms