RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 ZMYND11Q15326 602 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 ZFP69Q49AA0 526 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 ACTBL2Q562R1 376 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 IGSF11Q5DX21 431 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 LY6G6FQ5SQ64 297 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 LAMTOR1Q6IAA8 161 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 LIN54Q6MZP7 749 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 ADAM5Q6NVV9 412 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 OVCH2Q7RTZ1 564 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 PEG10Q86TG7 708 aaKnown RBP4.8□□□□□ -1.64
SF3B3-210ENST00000567654 NOXA1Q86UR1 476 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 SLC25A42Q86VD7 318 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 LDLRAD3Q86YD5 345 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 ZDHHC22Q8N966 263 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 OR2AK2Q8NG84 335 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 OR2Z1Q8NG97 314 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 RDH5Q92781 318 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 SLC25A21Q9BQT8 299 aaPredicted RBP4.8□□□□□ -1.64
SF3B3-210ENST00000567654 ZNF2Q9BSG1 426 aaPredicted RBP4.8□□□□□ -1.64
SF3B3-210ENST00000567654 RTBDNQ9BSG5 229 aaPredicted RBP4.8□□□□□ -1.64
SF3B3-210ENST00000567654 DPCDQ9BVM2 203 aaPredicted RBP4.8□□□□□ -1.64
SF3B3-210ENST00000567654 KRTAP9-8Q9BYQ0 159 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 CHIAQ9BZP6 476 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 ZNF436Q9C0F3 470 aaPredicted RBP4.8□□□□□ -1.64
SF3B3-210ENST00000567654 PPA2Q9H2U2 334 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 Q9N2K0 584 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 MYOZ1Q9NP98 299 aaPredicted RBP4.8□□□□□ -1.64
SF3B3-210ENST00000567654 AURKAIP1Q9NWT8 199 aaPredicted RBP4.8□□□□□ -1.64
SF3B3-210ENST00000567654 DCAF16Q9NXF7 216 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 TAAR3PQ9P1P4 343 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 SCP2D1Q9UJQ7 156 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 ZNF222Q9UK12 451 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 GPR132Q9UNW8 380 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 LRBAP50851 2863 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 ARHGAP32A7KAX9 2087 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 IGHV3OR15-7A0A075B7D8 119 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 A0A1B0GW55 424 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 C9orf170A2RU37 121 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 A6NLC8 198 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 SHISA9B4DS77 424 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 E7EQL1 145 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 H3BUI4 141 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 CCSO14618 274 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 GOSR2O14653 212 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 FABP7O15540 132 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 SPRY3O43610 288 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 CREBL2O60519 120 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-210ENST00000567654 NOS1APO75052 506 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-210ENST00000567654 NXPH2O95156 264 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 HAND1O96004 215 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 IGHV1-46P01743 117 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 C1QBP02746 253 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 IFNA6P05013 189 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 DUX4L2P0CJ85 424 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 DUX4L3P0CJ86 424 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 DUX4L4P0CJ87 422 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 DUX4L5P0CJ88 424 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 DUX4L6P0CJ89 424 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 DUX4L7P0CJ90 424 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 ZNF44P15621 663 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 RCC1P18754 421 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-210ENST00000567654 GLRA1P23415 457 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 LOXP28300 417 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-210ENST00000567654 CD80P33681 288 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 UQCRFS1P47985 274 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 ASCL1P50553 236 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 H2BFSP57053 126 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 KLF3P57682 345 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-210ENST00000567654 TAS2R46P59540 309 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 ARPC4P59998 168 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 SNRPD2P62316 118 aaKnown RBP4.79□□□□□ -1.64
SF3B3-210ENST00000567654 SUPT4H1P63272 117 aaKnown RBP4.79□□□□□ -1.64
SF3B3-210ENST00000567654 DHODHQ02127 395 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 ATXN7L3Q14CW9 347 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-210ENST00000567654 ARL6IP1Q15041 203 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 ZNF146Q15072 292 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 ADIPOQQ15848 244 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 CHRFAM7AQ494W8 412 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 C4orf46Q504U0 113 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 FAM201AQ5SY85 155 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 TMEM211Q6ICI0 200 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 FAM53AQ6NSI3 398 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-210ENST00000567654 ZNF880Q6PDB4 577 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 DUX4L9Q6RFH8 374 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-210ENST00000567654 ACP7Q6ZNF0 438 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 LYG2Q86SG7 212 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 LINC00596Q86U02 117 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 ZCCHC24Q8N2G6 241 aaKnown RBP4.79□□□□□ -1.64
SF3B3-210ENST00000567654 ARRDC1Q8N5I2 433 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 SPICQ8N5J4 248 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 GCSAMQ8N6F7 178 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 NUP37Q8NFH4 326 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 TERB2Q8NHR7 220 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 GRPEL2Q8TAA5 225 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 UBALD1Q8TB05 177 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 LINC01560Q8TB33 94 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 ZNF431Q8TF32 576 aaPredicted RBP4.79□□□□□ -1.64
SF3B3-210ENST00000567654 LRRC29Q8WV35 223 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 CCDC107Q8WV48 283 aa4.79□□□□□ -1.64
SF3B3-210ENST00000567654 ITLN1Q8WWA0 313 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms