RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 CKLFQ9UBR5 152 aa14.81□□□□□ -0.04
LINC01238-205ENST00000567549 FAM90A18PA6NE21 464 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 FAM90A16PA6NEW6 464 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 EFCAB10A6NFE3 127 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 FAM90A20PA6NIJ5 464 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 FAM90A9PA6NNJ1 464 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 FAM90A12PA8MX19 464 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 FAM90A5PA8MXJ8 464 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 NPIPB11E5RHQ5 1161 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 GABRPO00591 440 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 HTR3BO95264 441 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 GAPDHP04406 335 aaKnown RBP14.8□□□□□ -0.04
LINC01238-205ENST00000567549 FAM90A15PP0C7V4 464 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 FAM90A13PP0C7W8 464 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 FAM90A14PP0C7W9 464 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 FAM90A24PP0C7X0 464 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 CGB3P0DN86 165 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 CGB7P0DN87 165 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 DCKP27707 260 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 GDNFP39905 211 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 TMEM30BQ3MIR4 351 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 UNQ9370/PRO34162Q6UXP9 181 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 BAIAP2L2Q6UXY1 529 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 OR52M1Q8NGK5 317 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 OR13A1Q8NGR1 328 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 SPACA1Q9HBV2 294 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 CHCHD3Q9NX63 227 aaKnown RBP14.8□□□□□ -0.04
LINC01238-205ENST00000567549 PSORS1C1Q9UIG5 152 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 PSG11Q9UQ72 335 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 ST3GAL6Q9Y274 331 aa14.8□□□□□ -0.04
LINC01238-205ENST00000567549 TRAV24A0A0B4J272 114 aa14.79□□□□□ -0.04
LINC01238-205ENST00000567549 SMIM31A0A1B0GVY4 71 aa14.79□□□□□ -0.04
LINC01238-205ENST00000567549 TMEM30CPA0ZSE6 113 aa14.79□□□□□ -0.04
LINC01238-205ENST00000567549 SERPINE3A8MV23 424 aa14.79□□□□□ -0.04
LINC01238-205ENST00000567549 OR7C1O76099 320 aaPredicted RBP14.79□□□□□ -0.04
LINC01238-205ENST00000567549 MPIG6BO95866 241 aa14.79□□□□□ -0.04
LINC01238-205ENST00000567549 MYL12AP19105 171 aa14.79□□□□□ -0.04
LINC01238-205ENST00000567549 ZNF93P35789 620 aaPredicted RBP14.79□□□□□ -0.04
LINC01238-205ENST00000567549 ALDH3B2P48448 385 aa14.79□□□□□ -0.04
LINC01238-205ENST00000567549 MPV17LQ2QL34 196 aa14.79□□□□□ -0.04
LINC01238-205ENST00000567549 RSBN1Q5VWQ0 802 aaPredicted RBP14.79□□□□□ -0.04
LINC01238-205ENST00000567549 ZNF529Q6P280 563 aa14.79□□□□□ -0.04
LINC01238-205ENST00000567549 SVOPQ8N4V2 548 aa14.79□□□□□ -0.04
LINC01238-205ENST00000567549 DRAM1Q8N682 238 aa14.79□□□□□ -0.04
LINC01238-205ENST00000567549 OR51A2Q8NGJ7 313 aa14.79□□□□□ -0.04
LINC01238-205ENST00000567549 OR52I1Q8NGK6 324 aa14.79□□□□□ -0.04
LINC01238-205ENST00000567549 MRGPRDQ8TDS7 321 aa14.79□□□□□ -0.04
LINC01238-205ENST00000567549 TMEM106AQ96A25 262 aa14.79□□□□□ -0.04
LINC01238-205ENST00000567549 ZNF649Q9BS31 505 aa14.79□□□□□ -0.04
LINC01238-205ENST00000567549 DPCDQ9BVM2 203 aaPredicted RBP14.79□□□□□ -0.04
LINC01238-205ENST00000567549 CNOT2Q9NZN8 540 aaKnown RBP14.79□□□□□ -0.04
LINC01238-205ENST00000567549 NUDT19A8MXV4 375 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 CCRL2O00421 344 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 HSD17B6O14756 317 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 TXNL1O43396 289 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 RGS10O43665 173 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 AMY1AP04745 511 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 AMY2AP04746 511 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 SOX2P48431 317 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 GNG10P50151 68 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 ZNF816Q0VGE8 651 aaPredicted RBP14.78□□□□□ -0.04
LINC01238-205ENST00000567549 Q3ZCU0 254 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 TCTEX1D4Q5JR98 221 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 DDI2Q5TDH0 399 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 ASCL4Q6XD76 172 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 PRSS48Q7RTY5 328 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 SLC35E3Q7Z769 313 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 SPARTQ8N0X7 666 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 C5orf56Q8N8D9 126 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 C8orf31Q8N9H6 132 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 OR52N1Q8NH53 320 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 NEK7Q8TDX7 302 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 AMBNQ9NP70 447 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.78□□□□□ -0.04
LINC01238-205ENST00000567549 TAS2R4Q9NYW5 299 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 AASSQ9UDR5 926 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 ING4Q9UNL4 249 aa14.78□□□□□ -0.04
LINC01238-205ENST00000567549 A0A1W2PPI3 338 aa14.77□□□□□ -0.05
LINC01238-205ENST00000567549 ORC5O43913 435 aa14.77□□□□□ -0.05
LINC01238-205ENST00000567549 GTF2F2P13984 249 aa14.77□□□□□ -0.05
LINC01238-205ENST00000567549 BDKRB2P30411 391 aa14.77□□□□□ -0.05
LINC01238-205ENST00000567549 RBM11P57052 281 aaKnown RBP14.77□□□□□ -0.05
LINC01238-205ENST00000567549 SMN1Q16637 294 aaKnown RBP14.77□□□□□ -0.05
LINC01238-205ENST00000567549 LTC4SQ16873 150 aa14.77□□□□□ -0.05
LINC01238-205ENST00000567549 PIGYQ3MUY2 71 aa14.77□□□□□ -0.05
LINC01238-205ENST00000567549 SUMF2Q8NBJ7 301 aa14.77□□□□□ -0.05
LINC01238-205ENST00000567549 OR2T10Q8NGZ9 312 aa14.77□□□□□ -0.05
LINC01238-205ENST00000567549 GGHQ92820 318 aa14.77□□□□□ -0.05
LINC01238-205ENST00000567549 CCDC90BQ9GZT6 254 aa14.77□□□□□ -0.05
LINC01238-205ENST00000567549 FGF20Q9NP95 211 aaPredicted RBP14.77□□□□□ -0.05
LINC01238-205ENST00000567549 FKBP14Q9NWM8 211 aa14.77□□□□□ -0.05
LINC01238-205ENST00000567549 AP4M1O00189 453 aa14.76□□□□□ -0.05
LINC01238-205ENST00000567549 IGKV1D-33P01593 117 aa14.76□□□□□ -0.05
LINC01238-205ENST00000567549 IGKV1-33P01594 117 aa14.76□□□□□ -0.05
LINC01238-205ENST00000567549 MYCNOSP40205 109 aa14.76□□□□□ -0.05
LINC01238-205ENST00000567549 RPL23AP62750 156 aaKnown RBP14.76□□□□□ -0.05
LINC01238-205ENST00000567549 DEFB121Q5J5C9 76 aa14.76□□□□□ -0.05
LINC01238-205ENST00000567549 TRAT1Q6PIZ9 186 aa14.76□□□□□ -0.05
LINC01238-205ENST00000567549 MOB3BQ86TA1 216 aa14.76□□□□□ -0.05
LINC01238-205ENST00000567549 TGIF2LXQ8IUE1 241 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms