RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 OR4K15Q8NH41 348 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 ACOT12Q8WYK0 555 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 SULT4A1Q9BR01 284 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 PECRQ9BY49 303 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 DCSTAMPQ9H295 470 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 TMEM133Q9H2Q1 129 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 C12orf4Q9NQ89 552 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 RHBDL2Q9NX52 303 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 KCNIP1Q9NZI2 227 aa9.96□□□□□ -0.82
SF3B3-208ENST00000567250 KIAA2026Q5HYC2 2103 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 A0A0A6YYH2 397 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 A0A0A6YYJ9 748 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 A6NJ64 397 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 FOXI3A8MTJ6 420 aaPredicted RBP9.95□□□□□ -0.82
SF3B3-208ENST00000567250 NPFFO15130 113 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 SPINT2O43291 252 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 TCF21O43680 179 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 PAHP00439 452 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 MT-ND4P03905 459 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 FBP1P09467 338 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 HIST1H1DP16402 221 aaKnown RBP9.95□□□□□ -0.82
SF3B3-208ENST00000567250 COX7A1P24310 79 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 SSTR5P35346 364 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 EFNB2P52799 333 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 LGALS4P56470 323 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 KLRD1Q13241 179 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 C17orf58Q2M2W7 97 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 UBE2NLQ5JXB2 153 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 PRAMEF5Q5TYX0 476 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 RUSC1-AS1Q66K80 236 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 RTN4RL2Q86UN3 420 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 PDZD9Q8IXQ8 264 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 C11orf42Q8N5U0 333 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 MRPL30Q8TCC3 161 aaKnown RBP9.95□□□□□ -0.82
SF3B3-208ENST00000567250 ARHGAP5-AS1Q96IT6 56 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 SLC6A7Q99884 636 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 CMSS1Q9BQ75 279 aaKnown RBP9.95□□□□□ -0.82
SF3B3-208ENST00000567250 FAAP24Q9BTP7 215 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 LINC00574Q9H8X3 128 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 IDI2-AS1Q9NZ38 188 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 ZNF69Q9UC07 566 aa9.95□□□□□ -0.82
SF3B3-208ENST00000567250 IGHV2-26A0A0B4J1V2 119 aa9.94□□□□□ -0.82
SF3B3-208ENST00000567250 MEIOCA2RUB1 952 aa9.94□□□□□ -0.82
SF3B3-208ENST00000567250 CCDC160A6NGH7 325 aa9.94□□□□□ -0.82
SF3B3-208ENST00000567250 NPIPB11E5RHQ5 1161 aa9.94□□□□□ -0.82
SF3B3-208ENST00000567250 RAB27BO00194 218 aa9.94□□□□□ -0.82
SF3B3-208ENST00000567250 CD3GP09693 182 aa9.94□□□□□ -0.82
SF3B3-208ENST00000567250 PNKDQ8N490 385 aa9.94□□□□□ -0.82
SF3B3-208ENST00000567250 OR11H6Q8NGC7 330 aa9.94□□□□□ -0.82
SF3B3-208ENST00000567250 NDNFQ8TB73 568 aa9.94□□□□□ -0.82
SF3B3-208ENST00000567250 ZNF596Q8TC21 504 aa9.94□□□□□ -0.82
SF3B3-208ENST00000567250 CCDC107Q8WV48 283 aa9.94□□□□□ -0.82
SF3B3-208ENST00000567250 C22orf15Q8WYQ4 148 aa9.94□□□□□ -0.82
SF3B3-208ENST00000567250 DYRK2Q92630 601 aa9.94□□□□□ -0.82
SF3B3-208ENST00000567250 ARL11Q969Q4 196 aa9.94□□□□□ -0.82
SF3B3-208ENST00000567250 ISOC1Q96CN7 298 aa9.94□□□□□ -0.82
SF3B3-208ENST00000567250 KIRREL1Q96J84 757 aa9.94□□□□□ -0.82
SF3B3-208ENST00000567250 CLEC7AQ9BXN2 247 aa9.94□□□□□ -0.82
SF3B3-208ENST00000567250 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.94□□□□□ -0.82
SF3B3-208ENST00000567250 DIABLOQ9NR28 239 aa9.94□□□□□ -0.82
SF3B3-208ENST00000567250 MBNL3Q9NUK0 354 aaKnown RBP9.94□□□□□ -0.82
SF3B3-208ENST00000567250 FAM96BQ9Y3D0 163 aa9.94□□□□□ -0.82
SF3B3-208ENST00000567250 TBL2Q9Y4P3 447 aaKnown RBP9.94□□□□□ -0.82
SF3B3-208ENST00000567250 C2CD3Q4AC94 2353 aa9.94□□□□□ -0.82
SF3B3-208ENST00000567250 A0A075B6Q4 140 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 A0A087X0M5 115 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 TRBV6-6A0A0A6YYG2 114 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 A0A1B0GX30 115 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 MFNGO00587 321 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 TOR1AO14656 332 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 NAPSAO96009 420 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 ARG1P05089 322 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 GSTP1P09211 210 aaKnown RBP9.93□□□□□ -0.82
SF3B3-208ENST00000567250 CGB3P0DN86 165 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 CGB7P0DN87 165 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 ZNF182P17025 639 aaPredicted RBP9.93□□□□□ -0.82
SF3B3-208ENST00000567250 OMGP23515 440 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 NFYBP25208 207 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 CD34P28906 385 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 SAA4P35542 130 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 TMEM50BP56557 158 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 PITPNAQ00169 270 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 PLA2G7Q13093 441 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 ARFRP1Q13795 201 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 MOGAT2Q3SYC2 334 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 Q3ZCU0 254 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 PLAC9Q5JTB6 97 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 ZNF626Q68DY1 528 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 MZT2AQ6P582 158 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 OR52M1Q8NGK5 317 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 OR5H6Q8NGV6 325 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 SETD6Q8TBK2 473 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 CREB3L1Q96BA8 519 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 SLC25A38Q96DW6 304 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 S100A16Q96FQ6 103 aaKnown RBP9.93□□□□□ -0.82
SF3B3-208ENST00000567250 CMTM3Q96MX0 182 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 ZMAT3Q9HA38 289 aaKnown RBP9.93□□□□□ -0.82
SF3B3-208ENST00000567250 AK3Q9UIJ7 227 aa9.93□□□□□ -0.82
SF3B3-208ENST00000567250 AMMECR1Q9Y4X0 333 aaPredicted RBP9.93□□□□□ -0.82
SF3B3-208ENST00000567250 SVEP1Q4LDE5 3571 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms