RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, human

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD4-215	ENST00000566843	FAM90A7P	A6NKC0	464 aa		13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	FAM90A22P	A8MWA6	464 aa		13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	FAM90A12P	A8MX19	464 aa		13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	FAM90A5P	A8MXJ8	464 aa		13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	FAM90A23P	A8MXZ1	464 aa		13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843		H0Y980	276 aa		13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	LCAT	P04180	440 aa		13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	CST2	P09228	141 aa		13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	FAM90A15P	P0C7V4	464 aa		13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	FAM90A13P	P0C7W8	464 aa		13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	FAM90A14P	P0C7W9	464 aa		13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	FAM90A24P	P0C7X0	464 aa		13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	SLC25A6	P12236	298 aa		13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	NKAIN1	Q4KMZ8	207 aa		13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	SLC25A26	Q70HW3	274 aa		13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	DEFB119	Q8N690	84 aa		13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	NAT6	Q93015	286 aa		13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	ZNF845	Q96IR2	970 aa	Predicted RBP	13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	LURAP1	Q96LR2	239 aa		13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	AGMAT	Q9BSE5	352 aa		13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	PSMG3	Q9BT73	122 aa	Predicted RBP	13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	P4HTM	Q9NXG6	502 aa		13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	VAX2	Q9UIW0	290 aa		13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	RNF150	Q9ULK6	438 aa		13.46	□□□□□ -0.26
COMMD4-215	ENST00000566843	IGKV1D-13	A0A0B4J2D9	117 aa		13.45	□□□□□ -0.26
COMMD4-215	ENST00000566843	hCG_38984	A0A1B0GV85	526 aa		13.45	□□□□□ -0.26
COMMD4-215	ENST00000566843	OR6C6	A6NF89	314 aa		13.45	□□□□□ -0.26
COMMD4-215	ENST00000566843	ZFP92	A6NM28	416 aa		13.45	□□□□□ -0.26
COMMD4-215	ENST00000566843	TK1	P04183	234 aa		13.45	□□□□□ -0.26
COMMD4-215	ENST00000566843	IGKV1-13	P0DP09	117 aa		13.45	□□□□□ -0.26
COMMD4-215	ENST00000566843	COL10A1	Q03692	680 aa		13.45	□□□□□ -0.26
COMMD4-215	ENST00000566843	WDR25	Q64LD2	544 aa	Predicted RBP	13.45	□□□□□ -0.26
COMMD4-215	ENST00000566843	ZNF774	Q6NX45	483 aa		13.45	□□□□□ -0.26
COMMD4-215	ENST00000566843	ZNF880	Q6PDB4	577 aa		13.45	□□□□□ -0.26
COMMD4-215	ENST00000566843	C5orf24	Q7Z6I8	188 aa		13.45	□□□□□ -0.26
COMMD4-215	ENST00000566843	CENPV	Q7Z7K6	275 aa	Predicted RBP	13.45	□□□□□ -0.26
COMMD4-215	ENST00000566843	TGIF2LY	Q8IUE0	185 aa		13.45	□□□□□ -0.26
COMMD4-215	ENST00000566843	GPR137C	Q8N3F9	429 aa		13.45	□□□□□ -0.26
COMMD4-215	ENST00000566843	TSTD1	Q8NFU3	115 aa		13.45	□□□□□ -0.26
COMMD4-215	ENST00000566843	EXTL1	Q92935	676 aa		13.45	□□□□□ -0.26
COMMD4-215	ENST00000566843	RASL10B	Q96S79	203 aa		13.45	□□□□□ -0.26
COMMD4-215	ENST00000566843	LRFN1	Q9P244	771 aa		13.45	□□□□□ -0.26
COMMD4-215	ENST00000566843	IGHV3-15	A0A0B4J1V0	119 aa		13.44	□□□□□ -0.26
COMMD4-215	ENST00000566843	GCG	P01275	180 aa		13.44	□□□□□ -0.26
COMMD4-215	ENST00000566843	PRSS12	P56730	875 aa		13.44	□□□□□ -0.26
COMMD4-215	ENST00000566843	MRGPRG	Q86SM5	289 aa		13.44	□□□□□ -0.26
COMMD4-215	ENST00000566843	TMEM68	Q96MH6	324 aa		13.44	□□□□□ -0.26
COMMD4-215	ENST00000566843	TECTB	Q96PL2	329 aa		13.44	□□□□□ -0.26
COMMD4-215	ENST00000566843	UCN2	Q96RP3	112 aa		13.44	□□□□□ -0.26
COMMD4-215	ENST00000566843	RAB40C	Q96S21	281 aa		13.44	□□□□□ -0.26
COMMD4-215	ENST00000566843	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	13.44	□□□□□ -0.26
COMMD4-215	ENST00000566843	OR7C1	O76099	320 aa	Predicted RBP	13.44	□□□□□ -0.26
COMMD4-215	ENST00000566843	NAPSA	O96009	420 aa		13.44	□□□□□ -0.26
COMMD4-215	ENST00000566843	PDLIM4	P50479	330 aa		13.44	□□□□□ -0.26
COMMD4-215	ENST00000566843	OR14J1	Q9UGF5	321 aa		13.44	□□□□□ -0.26
COMMD4-215	ENST00000566843	NAT8	Q9UHE5	227 aa		13.44	□□□□□ -0.26
COMMD4-215	ENST00000566843	CCDC163	A0A0D9SF12	145 aa		13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	MDK	P21741	143 aa	Predicted RBP	13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	CLN3	Q13286	438 aa		13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	HERPUD1	Q15011	391 aa		13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	WDR74	Q6RFH5	385 aa	Predicted RBP	13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	SSX7	Q7RTT5	188 aa		13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	NAXE	Q8NCW5	288 aa		13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	GPHA2	Q96T91	129 aa		13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	RSG1	Q9BU20	258 aa		13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	VSIR	Q9H7M9	311 aa		13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	CCL28	Q9NRJ3	127 aa		13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	ASXL3	Q9C0F0	2248 aa		13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	NXPH3	O95157	252 aa		13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	SCT	P09683	121 aa		13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	NXPH1	P58417	271 aa		13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	ANKRD39	Q53RE8	183 aa		13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	PLCXD3	Q63HM9	321 aa		13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	LCN15	Q6UWW0	184 aa		13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	CALHM1	Q8IU99	346 aa		13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	SCGB1C1	Q8TD33	95 aa		13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	GPR146	Q96CH1	333 aa		13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	SPOCK3	Q9BQ16	436 aa		13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	UNC13C	Q8NB66	2214 aa		13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843	MED12	Q93074	2177 aa		13.43	□□□□□ -0.26
COMMD4-215	ENST00000566843		A0A0G2JRQ6	117 aa		13.42	□□□□□ -0.26
COMMD4-215	ENST00000566843	SLC33A1	O00400	549 aa	Predicted RBP	13.42	□□□□□ -0.26
COMMD4-215	ENST00000566843	TCAP	O15273	167 aa		13.42	□□□□□ -0.26
COMMD4-215	ENST00000566843	PGLYRP1	O75594	196 aa	Predicted RBP	13.42	□□□□□ -0.26
COMMD4-215	ENST00000566843	IL18BP	O95998	194 aa		13.42	□□□□□ -0.26
COMMD4-215	ENST00000566843	IFNA1	P01562	189 aa		13.42	□□□□□ -0.26
COMMD4-215	ENST00000566843	HLA-H	P01893	362 aa		13.42	□□□□□ -0.26
COMMD4-215	ENST00000566843	GLB1	P16278	677 aa		13.42	□□□□□ -0.26
COMMD4-215	ENST00000566843	CLDN15	P56746	228 aa		13.42	□□□□□ -0.26
COMMD4-215	ENST00000566843	NUTF2	P61970	127 aa	Known RBP	13.42	□□□□□ -0.26
COMMD4-215	ENST00000566843	SERF2	P84101	59 aa		13.42	□□□□□ -0.26
COMMD4-215	ENST00000566843	SLC25A24	Q6NUK1	477 aa		13.42	□□□□□ -0.26
COMMD4-215	ENST00000566843	CYP2G1P	Q6ZSU1	146 aa		13.42	□□□□□ -0.26
COMMD4-215	ENST00000566843	TGIF2LX	Q8IUE1	241 aa		13.42	□□□□□ -0.26
COMMD4-215	ENST00000566843	ZNF525	Q8N782	197 aa		13.42	□□□□□ -0.26
COMMD4-215	ENST00000566843	ACY3	Q96HD9	319 aa		13.42	□□□□□ -0.26
COMMD4-215	ENST00000566843	ZNF816-ZNF321P	A0A0X1KG74	233 aa		13.42	□□□□□ -0.26
COMMD4-215	ENST00000566843	TP53I11	O14683	189 aa		13.42	□□□□□ -0.26
COMMD4-215	ENST00000566843	SNRPC	P09234	159 aa	Known RBP	13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms