RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 MAGEA5P43359 124 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 FHITP49789 147 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 VAMP2P63027 116 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 ARG2P78540 354 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 PLGLB1Q02325 96 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 CLINT1Q14677 625 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 RNPS1Q15287 305 aaKnown RBP14.33□□□□□ -0.12
CMTM3-213ENST00000566756 DPPA3Q6W0C5 159 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 TMEM182Q6ZP80 229 aaPredicted RBP14.33□□□□□ -0.12
CMTM3-213ENST00000566756 ZNF818PQ6ZRF7 136 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 FAM213BQ8TBF2 198 aa14.33□□□□□ -0.12
CMTM3-213ENST00000566756 FGF23Q9GZV9 251 aaPredicted RBP14.33□□□□□ -0.12
CMTM3-213ENST00000566756 FREM2Q5SZK8 3169 aa14.32□□□□□ -0.12
CMTM3-213ENST00000566756 C5orf52A6NGY3 159 aa14.32□□□□□ -0.12
CMTM3-213ENST00000566756 ZNF891A8MT65 544 aaPredicted RBP14.32□□□□□ -0.12
CMTM3-213ENST00000566756 UBE2CO00762 179 aa14.32□□□□□ -0.12
CMTM3-213ENST00000566756 SYNGR4O95473 234 aa14.32□□□□□ -0.12
CMTM3-213ENST00000566756 SNRNP70P08621 437 aaKnown RBP14.32□□□□□ -0.12
CMTM3-213ENST00000566756 ATP6V0CP27449 155 aa14.32□□□□□ -0.12
CMTM3-213ENST00000566756 POLR2GP62487 172 aaKnown RBP eCLIP14.32□□□□□ -0.12
CMTM3-213ENST00000566756 SPIN3Q5JUX0 258 aa14.32□□□□□ -0.12
CMTM3-213ENST00000566756 SP5Q6BEB4 398 aaPredicted RBP14.32□□□□□ -0.12
CMTM3-213ENST00000566756 GAPTQ8N292 157 aa14.32□□□□□ -0.12
CMTM3-213ENST00000566756 OR2G3Q8NGZ4 309 aa14.32□□□□□ -0.12
CMTM3-213ENST00000566756 LILRB1Q8NHL6 650 aaPredicted RBP14.32□□□□□ -0.12
CMTM3-213ENST00000566756 C2CD4CQ8TF44 421 aa14.32□□□□□ -0.12
CMTM3-213ENST00000566756 HIST1H2AAQ96QV6 131 aa14.32□□□□□ -0.12
CMTM3-213ENST00000566756 DNAJC13O75165 2243 aa14.31□□□□□ -0.12
CMTM3-213ENST00000566756 SHANK1Q9Y566 2161 aa14.31□□□□□ -0.12
CMTM3-213ENST00000566756 M0R036 132 aa14.31□□□□□ -0.12
CMTM3-213ENST00000566756 ADAM20O43506 726 aa14.31□□□□□ -0.12
CMTM3-213ENST00000566756 C1QL1O75973 258 aa14.31□□□□□ -0.12
CMTM3-213ENST00000566756 SCTP09683 121 aa14.31□□□□□ -0.12
CMTM3-213ENST00000566756 CLDN18P56856 261 aa14.31□□□□□ -0.12
CMTM3-213ENST00000566756 HERPUD1Q15011 391 aa14.31□□□□□ -0.12
CMTM3-213ENST00000566756 TSC22D1Q15714 1073 aa14.31□□□□□ -0.12
CMTM3-213ENST00000566756 ZNF766Q5HY98 468 aa14.31□□□□□ -0.12
CMTM3-213ENST00000566756 ZNF880Q6PDB4 577 aa14.31□□□□□ -0.12
CMTM3-213ENST00000566756 ETV3LQ6ZN32 361 aa14.31□□□□□ -0.12
CMTM3-213ENST00000566756 IFT22Q9H7X7 185 aa14.31□□□□□ -0.12
CMTM3-213ENST00000566756 MTCH1Q9NZJ7 389 aa14.31□□□□□ -0.12
CMTM3-213ENST00000566756 KIAA1456Q9P272 454 aa14.31□□□□□ -0.12
CMTM3-213ENST00000566756 PTPRZ1P23471 2315 aaPredicted RBP14.31□□□□□ -0.12
CMTM3-213ENST00000566756 LRP5LA4QPB2 252 aa14.31□□□□□ -0.12
CMTM3-213ENST00000566756 CELA3AP09093 270 aa14.31□□□□□ -0.12
CMTM3-213ENST00000566756 TNFSF10P50591 281 aa14.31□□□□□ -0.12
CMTM3-213ENST00000566756 GPM6AP51674 278 aa14.31□□□□□ -0.12
CMTM3-213ENST00000566756 ZFP82Q8N141 532 aa14.31□□□□□ -0.12
CMTM3-213ENST00000566756 MPC1Q9Y5U8 109 aa14.31□□□□□ -0.12
CMTM3-213ENST00000566756 ZNF407Q9C0G0 2248 aa14.31□□□□□ -0.12
CMTM3-213ENST00000566756 C5orf49A4QMS7 147 aa14.3□□□□□ -0.12
CMTM3-213ENST00000566756 PCP4L1A6NKN8 68 aa14.3□□□□□ -0.12
CMTM3-213ENST00000566756 OR5B21A6NL26 309 aa14.3□□□□□ -0.12
CMTM3-213ENST00000566756 FAM166BA8MTA8 275 aa14.3□□□□□ -0.12
CMTM3-213ENST00000566756 SLC34A2O95436 690 aa14.3□□□□□ -0.12
CMTM3-213ENST00000566756 PPP1CCP36873 323 aaKnown RBP14.3□□□□□ -0.12
CMTM3-213ENST00000566756 SULT1A1P50225 295 aa14.3□□□□□ -0.12
CMTM3-213ENST00000566756 CCL11P51671 97 aa14.3□□□□□ -0.12
CMTM3-213ENST00000566756 IL24Q13007 206 aa14.3□□□□□ -0.12
CMTM3-213ENST00000566756 HIKESHIQ53FT3 197 aa14.3□□□□□ -0.12
CMTM3-213ENST00000566756 FDCSPQ8NFU4 85 aa14.3□□□□□ -0.12
CMTM3-213ENST00000566756 PLPPR1Q8TBJ4 325 aa14.3□□□□□ -0.12
CMTM3-213ENST00000566756 FBXO7Q9Y3I1 522 aa14.3□□□□□ -0.12
CMTM3-213ENST00000566756 IGKV1D-13A0A0B4J2D9 117 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 NPIPB11E5RHQ5 1161 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 SSSCA1O60232 199 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 CEACAM4O75871 244 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 SMIM6P0DI80 62 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 IGKV1-13P0DP09 117 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 RAB5AP20339 215 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 SLC10A1Q14973 349 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 EIF2S3LQ2VIR3 472 aaKnown RBP14.29□□□□□ -0.12
CMTM3-213ENST00000566756 SOHLH1Q5JUK2 328 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 SPSB3Q6PJ21 355 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.29□□□□□ -0.12
CMTM3-213ENST00000566756 ZNF573Q86YE8 665 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 SUMF2Q8NBJ7 301 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 TMEM171Q8WVE6 324 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 OR5P3Q8WZ94 311 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 POM121L2Q96KW2 1035 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 CABLES2Q9BTV7 478 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 METTL1Q9UBP6 276 aaKnown RBP14.29□□□□□ -0.12
CMTM3-213ENST00000566756 IGKV1-6A0A0C4DH72 117 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 A0A1B0GU03 582 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 RBFOX3A6NFN3 312 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 IGHV3-9P01782 118 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 S100A6P06703 90 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 PLP2Q04941 152 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 CXorf66Q5JRM2 361 aaPredicted RBP14.29□□□□□ -0.12
CMTM3-213ENST00000566756 PCSK4Q6UW60 755 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 C1QL4Q86Z23 238 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 OR5C1Q8NGR4 320 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 MRPL30Q8TCC3 161 aaKnown RBP14.29□□□□□ -0.12
CMTM3-213ENST00000566756 TCEAL7Q9BRU2 100 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 PKIBQ9C010 78 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 RNF115Q9Y4L5 304 aa14.29□□□□□ -0.12
CMTM3-213ENST00000566756 CD300LBA8K4G0 201 aa14.28□□□□□ -0.12
CMTM3-213ENST00000566756 PGLYRP1O75594 196 aaPredicted RBP14.28□□□□□ -0.12
CMTM3-213ENST00000566756 EIF3GO75821 320 aaKnown RBP eCLIP14.28□□□□□ -0.12
CMTM3-213ENST00000566756 DFFBO76075 338 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms