RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 CHST4Q8NCG5 386 aa13.15□□□□□ -0.3
TSR3-202ENST00000566296 OR13C5Q8NGS8 318 aa13.15□□□□□ -0.3
TSR3-202ENST00000566296 TMEM106AQ96A25 262 aa13.15□□□□□ -0.3
TSR3-202ENST00000566296 RPEQ96AT9 228 aa13.15□□□□□ -0.3
TSR3-202ENST00000566296 RHOFQ9HBH0 211 aa13.15□□□□□ -0.3
TSR3-202ENST00000566296 ING3Q9NXR8 418 aa13.15□□□□□ -0.3
TSR3-202ENST00000566296 AMMECR1Q9Y4X0 333 aaPredicted RBP13.15□□□□□ -0.3
TSR3-202ENST00000566296 WI2-2373I1.2A0A1W2PRP0 233 aa13.14□□□□□ -0.31
TSR3-202ENST00000566296 ZNF729A6NN14 1252 aaPredicted RBP13.14□□□□□ -0.31
TSR3-202ENST00000566296 SC5DO75845 299 aa13.14□□□□□ -0.31
TSR3-202ENST00000566296 TFAP2AP05549 437 aa13.14□□□□□ -0.31
TSR3-202ENST00000566296 FAM106CPP0CH98 169 aa13.14□□□□□ -0.31
TSR3-202ENST00000566296 GALP22466 123 aa13.14□□□□□ -0.31
TSR3-202ENST00000566296 LMO1P25800 156 aa13.14□□□□□ -0.31
TSR3-202ENST00000566296 HOXD3P31249 432 aaPredicted RBP13.14□□□□□ -0.31
TSR3-202ENST00000566296 CD69Q07108 199 aa13.14□□□□□ -0.31
TSR3-202ENST00000566296 DCTN2Q13561 401 aaKnown RBP13.14□□□□□ -0.31
TSR3-202ENST00000566296 ACSM3Q53FZ2 586 aa13.14□□□□□ -0.31
TSR3-202ENST00000566296 LINC00482Q8N8I6 264 aa13.14□□□□□ -0.31
TSR3-202ENST00000566296 OR5D18Q8NGL1 313 aa13.14□□□□□ -0.31
TSR3-202ENST00000566296 OR5D14Q8NGL3 314 aa13.14□□□□□ -0.31
TSR3-202ENST00000566296 OR13C9Q8NGT0 318 aa13.14□□□□□ -0.31
TSR3-202ENST00000566296 PHYHIPQ92561 330 aa13.14□□□□□ -0.31
TSR3-202ENST00000566296 TOMM40LQ969M1 308 aa13.14□□□□□ -0.31
TSR3-202ENST00000566296 TMEM203Q969S6 136 aa13.14□□□□□ -0.31
TSR3-202ENST00000566296 OR14A2Q96R54 314 aa13.14□□□□□ -0.31
TSR3-202ENST00000566296 OR6C3Q9NZP0 311 aa13.14□□□□□ -0.31
TSR3-202ENST00000566296 A0A087X0M5 115 aa13.13□□□□□ -0.31
TSR3-202ENST00000566296 IGKV1-12A0A0C4DH73 117 aa13.13□□□□□ -0.31
TSR3-202ENST00000566296 A0A1B0GX30 115 aa13.13□□□□□ -0.31
TSR3-202ENST00000566296 IGKV1D-12P01611 117 aa13.13□□□□□ -0.31
TSR3-202ENST00000566296 AMY1AP04745 511 aa13.13□□□□□ -0.31
TSR3-202ENST00000566296 AMY2AP04746 511 aa13.13□□□□□ -0.31
TSR3-202ENST00000566296 CD36P16671 472 aa13.13□□□□□ -0.31
TSR3-202ENST00000566296 NFYBP25208 207 aa13.13□□□□□ -0.31
TSR3-202ENST00000566296 ALDH3B2P48448 385 aa13.13□□□□□ -0.31
TSR3-202ENST00000566296 KRTAP10-11P60412 298 aa13.13□□□□□ -0.31
TSR3-202ENST00000566296 EGFEM1PQ0D2K5 195 aa13.13□□□□□ -0.31
TSR3-202ENST00000566296 ATXN7L3Q14CW9 347 aaPredicted RBP13.13□□□□□ -0.31
TSR3-202ENST00000566296 CD200R1LQ6Q8B3 271 aa13.13□□□□□ -0.31
TSR3-202ENST00000566296 UNQ9370/PRO34162Q6UXP9 181 aa13.13□□□□□ -0.31
TSR3-202ENST00000566296 CEACAM19Q7Z692 300 aa13.13□□□□□ -0.31
TSR3-202ENST00000566296 OR9G1Q8NH87 305 aa13.13□□□□□ -0.31
TSR3-202ENST00000566296 COQ2Q96H96 371 aa13.13□□□□□ -0.31
TSR3-202ENST00000566296 DERL3Q96Q80 235 aa13.13□□□□□ -0.31
TSR3-202ENST00000566296 MCRIP2Q9BUT9 160 aaKnown RBP13.13□□□□□ -0.31
TSR3-202ENST00000566296 ZCCHC4Q9H5U6 513 aa13.13□□□□□ -0.31
TSR3-202ENST00000566296 CKLFQ9UBR5 152 aa13.13□□□□□ -0.31
TSR3-202ENST00000566296 TRBV5-7A0A0A0MS05 114 aa13.12□□□□□ -0.31
TSR3-202ENST00000566296 TRDV1A0A1B0GX56 115 aa13.12□□□□□ -0.31
TSR3-202ENST00000566296 SLC33A1O00400 549 aaPredicted RBP13.12□□□□□ -0.31
TSR3-202ENST00000566296 DEGS1O15121 323 aa13.12□□□□□ -0.31
TSR3-202ENST00000566296 ARL6IP5O75915 188 aa13.12□□□□□ -0.31
TSR3-202ENST00000566296 GLP1RP43220 463 aa13.12□□□□□ -0.31
TSR3-202ENST00000566296 RPL5P46777 297 aaKnown RBP13.12□□□□□ -0.31
TSR3-202ENST00000566296 RPL23AP62750 156 aaKnown RBP13.12□□□□□ -0.31
TSR3-202ENST00000566296 FABP5Q01469 135 aa13.12□□□□□ -0.31
TSR3-202ENST00000566296 TIMM50Q3ZCQ8 353 aa13.12□□□□□ -0.31
TSR3-202ENST00000566296 SAXO1Q8IYX7 474 aa13.12□□□□□ -0.31
TSR3-202ENST00000566296 OR13F1Q8NGS4 319 aa13.12□□□□□ -0.31
TSR3-202ENST00000566296 SPACA5Q96QH8 159 aa13.12□□□□□ -0.31
TSR3-202ENST00000566296 STUB1Q9UNE7 303 aa13.12□□□□□ -0.31
TSR3-202ENST00000566296 KBTBD11-OT1A0A1B0GTJ5 212 aa13.11□□□□□ -0.31
TSR3-202ENST00000566296 NUDT19A8MXV4 375 aa13.11□□□□□ -0.31
TSR3-202ENST00000566296 LY6LH3BQJ8 138 aa13.11□□□□□ -0.31
TSR3-202ENST00000566296 GABRPO00591 440 aa13.11□□□□□ -0.31
TSR3-202ENST00000566296 SULT1B1O43704 296 aa13.11□□□□□ -0.31
TSR3-202ENST00000566296 GPX5O75715 221 aa13.11□□□□□ -0.31
TSR3-202ENST00000566296 SNRNP70P08621 437 aaKnown RBP13.11□□□□□ -0.31
TSR3-202ENST00000566296 FSTP19883 344 aa13.11□□□□□ -0.31
TSR3-202ENST00000566296 PPP3R1P63098 170 aa13.11□□□□□ -0.31
TSR3-202ENST00000566296 HES1Q14469 280 aa13.11□□□□□ -0.31
TSR3-202ENST00000566296 C17orf58Q2M2W7 97 aa13.11□□□□□ -0.31
TSR3-202ENST00000566296 HSD17B12Q53GQ0 312 aa13.11□□□□□ -0.31
TSR3-202ENST00000566296 Q6P435 159 aa13.11□□□□□ -0.31
TSR3-202ENST00000566296 TMEM91Q6ZNR0 172 aa13.11□□□□□ -0.31
TSR3-202ENST00000566296 THNSL2Q86YJ6 484 aa13.11□□□□□ -0.31
TSR3-202ENST00000566296 MRPL41Q8IXM3 137 aaKnown RBP13.11□□□□□ -0.31
TSR3-202ENST00000566296 OR56B4Q8NH76 319 aa13.11□□□□□ -0.31
TSR3-202ENST00000566296 CHPT1Q8WUD6 406 aa13.11□□□□□ -0.31
TSR3-202ENST00000566296 YIPF6Q96EC8 236 aa13.11□□□□□ -0.31
TSR3-202ENST00000566296 KIRREL1Q96J84 757 aa13.11□□□□□ -0.31
TSR3-202ENST00000566296 PPIL3Q9H2H8 161 aaKnown RBP13.11□□□□□ -0.31
TSR3-202ENST00000566296 SSR3Q9UNL2 185 aa13.11□□□□□ -0.31
TSR3-202ENST00000566296 A0A1W2PPK0 400 aa13.1□□□□□ -0.31
TSR3-202ENST00000566296 HSPB6O14558 160 aa13.1□□□□□ -0.31
TSR3-202ENST00000566296 HCKP08631 526 aa13.1□□□□□ -0.31
TSR3-202ENST00000566296 UCHL1P09936 223 aa13.1□□□□□ -0.31
TSR3-202ENST00000566296 TMEM225BP0DP42 221 aa13.1□□□□□ -0.31
TSR3-202ENST00000566296 TMEM11P17152 192 aa13.1□□□□□ -0.31
TSR3-202ENST00000566296 IGFBP3P17936 291 aaPredicted RBP13.1□□□□□ -0.31
TSR3-202ENST00000566296 RAB3AP20336 220 aa13.1□□□□□ -0.31
TSR3-202ENST00000566296 SLC6A1P30531 599 aa13.1□□□□□ -0.31
TSR3-202ENST00000566296 FGF9P31371 208 aaPredicted RBP13.1□□□□□ -0.31
TSR3-202ENST00000566296 MTNR1BP49286 362 aa13.1□□□□□ -0.31
TSR3-202ENST00000566296 THBS3P49746 956 aa13.1□□□□□ -0.31
TSR3-202ENST00000566296 INSL4Q14641 139 aa13.1□□□□□ -0.31
TSR3-202ENST00000566296 ZNF529Q6P280 563 aa13.1□□□□□ -0.31
TSR3-202ENST00000566296 ETV3LQ6ZN32 361 aa13.1□□□□□ -0.31
TSR3-202ENST00000566296 GPR141Q7Z602 305 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms