RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 hCG_2014768A0A024R1R8 64 aa25.41■■□□□ 1.66
CTCF-203ENST00000566078 IGHV4-39P01824 125 aa25.41■■□□□ 1.66
CTCF-203ENST00000566078 OR5H8P0DN80 308 aa25.41■■□□□ 1.66
CTCF-203ENST00000566078 NDUFB7P17568 137 aa25.41■■□□□ 1.66
CTCF-203ENST00000566078 SEC61A1P61619 476 aaKnown RBP25.41■■□□□ 1.66
CTCF-203ENST00000566078 OR4A4PQ8NGN8 299 aa25.41■■□□□ 1.66
CTCF-203ENST00000566078 OR13A1Q8NGR1 328 aa25.41■■□□□ 1.66
CTCF-203ENST00000566078 MRGPRDQ8TDS7 321 aa25.41■■□□□ 1.66
CTCF-203ENST00000566078 NRGNQ92686 78 aa25.41■■□□□ 1.66
CTCF-203ENST00000566078 KCNIP1Q9NZI2 227 aa25.41■■□□□ 1.66
CTCF-203ENST00000566078 FUOMA2VDF0 154 aa25.4■■□□□ 1.66
CTCF-203ENST00000566078 ERP29P30040 261 aaKnown RBP25.4■■□□□ 1.66
CTCF-203ENST00000566078 GLP1RP43220 463 aa25.4■■□□□ 1.66
CTCF-203ENST00000566078 HMGN3Q15651 99 aa25.4■■□□□ 1.66
CTCF-203ENST00000566078 C6orf183Q5T699 404 aa25.4■■□□□ 1.66
CTCF-203ENST00000566078 MARVELD1Q9BSK0 173 aa25.4■■□□□ 1.66
CTCF-203ENST00000566078 TAF9BQ9HBM6 251 aa25.4■■□□□ 1.66
CTCF-203ENST00000566078 NDUFB3O43676 98 aa25.39■■□□□ 1.66
CTCF-203ENST00000566078 TMEM33P57088 247 aa25.39■■□□□ 1.66
CTCF-203ENST00000566078 HERPUD1Q15011 391 aa25.39■■□□□ 1.66
CTCF-203ENST00000566078 PRR18Q8N4B5 295 aa25.39■■□□□ 1.66
CTCF-203ENST00000566078 OR13C8Q8NGS7 320 aa25.39■■□□□ 1.66
CTCF-203ENST00000566078 DCTN5Q9BTE1 182 aa25.39■■□□□ 1.66
CTCF-203ENST00000566078 CENPEQ02224 2701 aa25.39■■□□□ 1.65
CTCF-203ENST00000566078 MEX3AA1L020 520 aaKnown RBP25.38■■□□□ 1.65
CTCF-203ENST00000566078 CEACAM18A8MTB9 384 aa25.38■■□□□ 1.65
CTCF-203ENST00000566078 BET1O15155 118 aa25.38■■□□□ 1.65
CTCF-203ENST00000566078 LRRC10Q5BKY1 277 aa25.38■■□□□ 1.65
CTCF-203ENST00000566078 ZNF787Q6DD87 383 aa25.38■■□□□ 1.65
CTCF-203ENST00000566078 UBALD1Q8TB05 177 aa25.38■■□□□ 1.65
CTCF-203ENST00000566078 KIRREL1Q96J84 757 aa25.38■■□□□ 1.65
CTCF-203ENST00000566078 FLVCR2Q9UPI3 526 aa25.38■■□□□ 1.65
CTCF-203ENST00000566078 CELSR2Q9HCU4 2923 aa25.38■■□□□ 1.65
CTCF-203ENST00000566078 IGKV1-6A0A0C4DH72 117 aa25.37■■□□□ 1.65
CTCF-203ENST00000566078 ARPC1BO15143 372 aaKnown RBP25.37■■□□□ 1.65
CTCF-203ENST00000566078 FCN3O75636 299 aa25.37■■□□□ 1.65
CTCF-203ENST00000566078 H2AFB2P0C5Z0 115 aa25.37■■□□□ 1.65
CTCF-203ENST00000566078 SSTR2P30874 369 aa25.37■■□□□ 1.65
CTCF-203ENST00000566078 GPR6P46095 362 aaPredicted RBP25.37■■□□□ 1.65
CTCF-203ENST00000566078 RAB25P57735 213 aa25.37■■□□□ 1.65
CTCF-203ENST00000566078 ZNF2Q9BSG1 426 aaPredicted RBP25.37■■□□□ 1.65
CTCF-203ENST00000566078 YLPM1P49750 1951 aaKnown RBP25.37■■□□□ 1.65
CTCF-203ENST00000566078 C12orf77C9JDV5 145 aa25.37■■□□□ 1.65
CTCF-203ENST00000566078 INMT-MINDY4F8WBC2 141 aa25.37■■□□□ 1.65
CTCF-203ENST00000566078 DVL1O14640 695 aa25.37■■□□□ 1.65
CTCF-203ENST00000566078 TMEM155Q4W5P6 130 aa25.37■■□□□ 1.65
CTCF-203ENST00000566078 TRAT1Q6PIZ9 186 aa25.37■■□□□ 1.65
CTCF-203ENST00000566078 ZNF525Q8N782 197 aa25.37■■□□□ 1.65
CTCF-203ENST00000566078 OR6F1Q8NGZ6 308 aa25.37■■□□□ 1.65
CTCF-203ENST00000566078 MARVELD3Q96A59 401 aa25.37■■□□□ 1.65
CTCF-203ENST00000566078 MRGPRFQ96AM1 343 aa25.37■■□□□ 1.65
CTCF-203ENST00000566078 SLC25A21Q9BQT8 299 aaPredicted RBP25.37■■□□□ 1.65
CTCF-203ENST00000566078 CABLES2Q9BTV7 478 aa25.37■■□□□ 1.65
CTCF-203ENST00000566078 NCOR1P1Q9H4R4 102 aa25.37■■□□□ 1.65
CTCF-203ENST00000566078 FBN2P35556 2912 aa25.36■■□□□ 1.65
CTCF-203ENST00000566078 RPS2P15880 293 aaKnown RBP25.36■■□□□ 1.65
CTCF-203ENST00000566078 LHFPL1Q86WI0 220 aa25.36■■□□□ 1.65
CTCF-203ENST00000566078 TERB2Q8NHR7 220 aa25.36■■□□□ 1.65
CTCF-203ENST00000566078 IL1F10Q8WWZ1 152 aa25.36■■□□□ 1.65
CTCF-203ENST00000566078 LURAP1Q96LR2 239 aa25.36■■□□□ 1.65
CTCF-203ENST00000566078 TMPRSS13Q9BYE2 586 aa25.36■■□□□ 1.65
CTCF-203ENST00000566078 CTXN2P0C2S0 81 aa25.35■■□□□ 1.65
CTCF-203ENST00000566078 SSTR5P35346 364 aa25.35■■□□□ 1.65
CTCF-203ENST00000566078 ZNF660Q6AZW8 331 aaPredicted RBP25.35■■□□□ 1.65
CTCF-203ENST00000566078 OR6C3Q9NZP0 311 aa25.35■■□□□ 1.65
CTCF-203ENST00000566078 FCGR2CP31995 323 aa25.34■■□□□ 1.65
CTCF-203ENST00000566078 SPICQ8N5J4 248 aa25.34■■□□□ 1.65
CTCF-203ENST00000566078 OR1L1Q8NH94 360 aa25.34■■□□□ 1.65
CTCF-203ENST00000566078 PCDHB10Q9UN67 800 aa25.34■■□□□ 1.65
CTCF-203ENST00000566078 HBZP02008 142 aa25.34■■□□□ 1.65
CTCF-203ENST00000566078 NFYAP23511 347 aaPredicted RBP25.34■■□□□ 1.65
CTCF-203ENST00000566078 NPY4RP50391 375 aa25.34■■□□□ 1.65
CTCF-203ENST00000566078 AADACL3Q5VUY0 350 aa25.34■■□□□ 1.65
CTCF-203ENST00000566078 DHRS11Q6UWP2 260 aa25.34■■□□□ 1.65
CTCF-203ENST00000566078 MIOXQ9UGB7 285 aa25.34■■□□□ 1.65
CTCF-203ENST00000566078 OR5H14A6NHG9 310 aa25.33■■□□□ 1.65
CTCF-203ENST00000566078 RLN1P04808 185 aa25.33■■□□□ 1.65
CTCF-203ENST00000566078 ZNF554Q86TJ5 538 aa25.33■■□□□ 1.65
CTCF-203ENST00000566078 ZNF565Q8N9K5 539 aa25.33■■□□□ 1.65
CTCF-203ENST00000566078 OR10J5Q8NHC4 309 aa25.33■■□□□ 1.65
CTCF-203ENST00000566078 MARCH1Q8TCQ1 289 aa25.33■■□□□ 1.65
CTCF-203ENST00000566078 H1FXQ92522 213 aaKnown RBP25.33■■□□□ 1.65
CTCF-203ENST00000566078 ARL11Q969Q4 196 aa25.33■■□□□ 1.65
CTCF-203ENST00000566078 NARFLQ9H6Q4 476 aa25.33■■□□□ 1.65
CTCF-203ENST00000566078 ARID1AO14497 2285 aa25.32■■□□□ 1.64
CTCF-203ENST00000566078 SPG11Q96JI7 2443 aa25.32■■□□□ 1.64
CTCF-203ENST00000566078 TRGV10A0A0A0MS01 117 aa25.32■■□□□ 1.64
CTCF-203ENST00000566078 TRBV6-7A0A0A0MS04 114 aa25.32■■□□□ 1.64
CTCF-203ENST00000566078 ATP5J2P56134 94 aa25.32■■□□□ 1.64
CTCF-203ENST00000566078 KRTAP10-9P60411 292 aa25.32■■□□□ 1.64
CTCF-203ENST00000566078 CR1LQ2VPA4 569 aa25.32■■□□□ 1.64
CTCF-203ENST00000566078 TCF23Q7RTU1 214 aa25.32■■□□□ 1.64
CTCF-203ENST00000566078 OR8B3Q8NGG8 313 aa25.32■■□□□ 1.64
CTCF-203ENST00000566078 OR8B2Q96RD0 313 aa25.32■■□□□ 1.64
CTCF-203ENST00000566078 OR1A1Q9P1Q5 309 aa25.32■■□□□ 1.64
CTCF-203ENST00000566078 SLC23A1Q9UHI7 598 aa25.32■■□□□ 1.64
CTCF-203ENST00000566078 VSIG4Q9Y279 399 aa25.32■■□□□ 1.64
CTCF-203ENST00000566078 GZMHP20718 246 aa25.31■■□□□ 1.64
CTCF-203ENST00000566078 IL2RGP31785 369 aa25.31■■□□□ 1.64
CTCF-203ENST00000566078 PDLIM4P50479 330 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms