RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 DMKNQ6E0U4 476 aaPredicted RBP18.78■□□□□ 0.6
RAB40C-209ENST00000565511 CCDC107Q8WV48 283 aa18.78■□□□□ 0.6
RAB40C-209ENST00000565511 GHSRQ92847 366 aa18.78■□□□□ 0.6
RAB40C-209ENST00000565511 ZNF184Q99676 751 aaPredicted RBP18.78■□□□□ 0.6
RAB40C-209ENST00000565511 PCDHB16Q9NRJ7 776 aa18.78■□□□□ 0.6
RAB40C-209ENST00000565511 BABAM2Q9NXR7 383 aa18.78■□□□□ 0.6
RAB40C-209ENST00000565511 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.78■□□□□ 0.6
RAB40C-209ENST00000565511 IGHV3-43A0A0B4J1X8 118 aa18.77■□□□□ 0.6
RAB40C-209ENST00000565511 PSMB11A5LHX3 300 aa18.77■□□□□ 0.6
RAB40C-209ENST00000565511 LINC01548A6NM66 108 aa18.77■□□□□ 0.6
RAB40C-209ENST00000565511 K7EIL1 84 aa18.77■□□□□ 0.6
RAB40C-209ENST00000565511 IGHV3-43DP0DP04 118 aa18.77■□□□□ 0.6
RAB40C-209ENST00000565511 PPP3R1P63098 170 aa18.77■□□□□ 0.6
RAB40C-209ENST00000565511 LRRC36Q1X8D7 754 aa18.77■□□□□ 0.6
RAB40C-209ENST00000565511 SLC22A6Q4U2R8 563 aa18.77■□□□□ 0.6
RAB40C-209ENST00000565511 TMPRSS11AQ6ZMR5 421 aa18.77■□□□□ 0.6
RAB40C-209ENST00000565511 C10orf67Q8IYJ2 551 aa18.77■□□□□ 0.6
RAB40C-209ENST00000565511 LINC00482Q8N8I6 264 aa18.77■□□□□ 0.6
RAB40C-209ENST00000565511 OR10A7Q8NGE5 316 aa18.77■□□□□ 0.6
RAB40C-209ENST00000565511 RDH12Q96NR8 316 aa18.77■□□□□ 0.6
RAB40C-209ENST00000565511 TMEM30CPA0ZSE6 113 aa18.76■□□□□ 0.59
RAB40C-209ENST00000565511 HSD17B6O14756 317 aa18.76■□□□□ 0.59
RAB40C-209ENST00000565511 SLC31A2O15432 143 aa18.76■□□□□ 0.59
RAB40C-209ENST00000565511 MPIG6BO95866 241 aa18.76■□□□□ 0.59
RAB40C-209ENST00000565511 RAB7AP51149 207 aa18.76■□□□□ 0.59
RAB40C-209ENST00000565511 RIPK1Q13546 671 aa18.76■□□□□ 0.59
RAB40C-209ENST00000565511 LAIR2Q6ISS4 152 aa18.76■□□□□ 0.59
RAB40C-209ENST00000565511 OR8H3Q8N146 312 aa18.76■□□□□ 0.59
RAB40C-209ENST00000565511 OR10X1Q8NGY0 326 aa18.76■□□□□ 0.59
RAB40C-209ENST00000565511 CYGBQ8WWM9 190 aa18.76■□□□□ 0.59
RAB40C-209ENST00000565511 EXOSC1Q9Y3B2 195 aaKnown RBP18.76■□□□□ 0.59
RAB40C-209ENST00000565511 TRBV5-7A0A0A0MS05 114 aa18.75■□□□□ 0.59
RAB40C-209ENST00000565511 IGHV1-3A0A0C4DH29 117 aa18.75■□□□□ 0.59
RAB40C-209ENST00000565511 A0A1W2PPK0 400 aa18.75■□□□□ 0.59
RAB40C-209ENST00000565511 ADARB1P78563 741 aaKnown RBP18.75■□□□□ 0.59
RAB40C-209ENST00000565511 ZNF816Q0VGE8 651 aaPredicted RBP18.75■□□□□ 0.59
RAB40C-209ENST00000565511 ATAD3CQ5T2N8 411 aa18.75■□□□□ 0.59
RAB40C-209ENST00000565511 ZNF497Q6ZNH5 498 aa18.75■□□□□ 0.59
RAB40C-209ENST00000565511 GGHQ92820 318 aa18.75■□□□□ 0.59
RAB40C-209ENST00000565511 ARL11Q969Q4 196 aa18.75■□□□□ 0.59
RAB40C-209ENST00000565511 MUL1Q969V5 352 aa18.75■□□□□ 0.59
RAB40C-209ENST00000565511 PNMA8CA0A1B0GUJ8 204 aa18.74■□□□□ 0.59
RAB40C-209ENST00000565511 GPX5O75715 221 aa18.74■□□□□ 0.59
RAB40C-209ENST00000565511 MT-ND4P03905 459 aa18.74■□□□□ 0.59
RAB40C-209ENST00000565511 CSTBP04080 98 aaKnown RBP18.74■□□□□ 0.59
RAB40C-209ENST00000565511 RPL23AP62750 156 aaKnown RBP18.74■□□□□ 0.59
RAB40C-209ENST00000565511 SLC35A2P78381 396 aa18.74■□□□□ 0.59
RAB40C-209ENST00000565511 MPV17LQ2QL34 196 aa18.74■□□□□ 0.59
RAB40C-209ENST00000565511 SLC16A12Q6ZSM3 486 aa18.74■□□□□ 0.59
RAB40C-209ENST00000565511 Q8N6K4 173 aa18.74■□□□□ 0.59
RAB40C-209ENST00000565511 OR14A2Q96R54 314 aa18.74■□□□□ 0.59
RAB40C-209ENST00000565511 GFOD1Q9NXC2 390 aa18.74■□□□□ 0.59
RAB40C-209ENST00000565511 RCC2Q9P258 522 aaKnown RBP18.74■□□□□ 0.59
RAB40C-209ENST00000565511 COL7A1Q02388 2944 aa18.73■□□□□ 0.59
RAB40C-209ENST00000565511 WI2-2373I1.2A0A1W2PRP0 233 aa18.73■□□□□ 0.59
RAB40C-209ENST00000565511 CCRL2O00421 344 aa18.73■□□□□ 0.59
RAB40C-209ENST00000565511 SDCBPO00560 298 aaPredicted RBP18.73■□□□□ 0.59
RAB40C-209ENST00000565511 FGF16O43320 207 aa18.73■□□□□ 0.59
RAB40C-209ENST00000565511 MYL12AP19105 171 aa18.73■□□□□ 0.59
RAB40C-209ENST00000565511 FSTP19883 344 aa18.73■□□□□ 0.59
RAB40C-209ENST00000565511 HOXD3P31249 432 aaPredicted RBP18.73■□□□□ 0.59
RAB40C-209ENST00000565511 EBI3Q14213 229 aa18.73■□□□□ 0.59
RAB40C-209ENST00000565511 Q499Y3 187 aa18.73■□□□□ 0.59
RAB40C-209ENST00000565511 OR2W3Q7Z3T1 314 aa18.73■□□□□ 0.59
RAB40C-209ENST00000565511 C5orf24Q7Z6I8 188 aa18.73■□□□□ 0.59
RAB40C-209ENST00000565511 LINC00596Q86U02 117 aa18.73■□□□□ 0.59
RAB40C-209ENST00000565511 MRPL41Q8IXM3 137 aaKnown RBP18.73■□□□□ 0.59
RAB40C-209ENST00000565511 ST6GALNAC6Q969X2 333 aa18.73■□□□□ 0.59
RAB40C-209ENST00000565511 TMEM80Q96HE8 168 aa18.73■□□□□ 0.59
RAB40C-209ENST00000565511 EAF1Q96JC9 268 aaPredicted RBP18.73■□□□□ 0.59
RAB40C-209ENST00000565511 ZNF736B4DX44 427 aaPredicted RBP18.72■□□□□ 0.59
RAB40C-209ENST00000565511 C12orf77C9JDV5 145 aa18.72■□□□□ 0.59
RAB40C-209ENST00000565511 IGHG2P01859 326 aa18.72■□□□□ 0.59
RAB40C-209ENST00000565511 GNAO1P09471 354 aa18.72■□□□□ 0.59
RAB40C-209ENST00000565511 C8orf86Q6ZUL3 223 aa18.72■□□□□ 0.59
RAB40C-209ENST00000565511 MOB3BQ86TA1 216 aa18.72■□□□□ 0.59
RAB40C-209ENST00000565511 LYPD6Q86Y78 171 aa18.72■□□□□ 0.59
RAB40C-209ENST00000565511 IZUMO1Q8IYV9 350 aa18.72■□□□□ 0.59
RAB40C-209ENST00000565511 LINC00311Q8N616 119 aa18.72■□□□□ 0.59
RAB40C-209ENST00000565511 ZNF439Q8NDP4 499 aa18.72■□□□□ 0.59
RAB40C-209ENST00000565511 TMEM104Q8NE00 496 aa18.72■□□□□ 0.59
RAB40C-209ENST00000565511 NEK7Q8TDX7 302 aa18.72■□□□□ 0.59
RAB40C-209ENST00000565511 RCC1LQ96I51 464 aaKnown RBP18.72■□□□□ 0.59
RAB40C-209ENST00000565511 MRPS28Q9Y2Q9 187 aaKnown RBP18.72■□□□□ 0.59
RAB40C-209ENST00000565511 IRGMA1A4Y4 181 aa18.71■□□□□ 0.59
RAB40C-209ENST00000565511 SERPINE3A8MV23 424 aa18.71■□□□□ 0.59
RAB40C-209ENST00000565511 AIPO00170 330 aa18.71■□□□□ 0.59
RAB40C-209ENST00000565511 EBAG9O00559 213 aa18.71■□□□□ 0.59
RAB40C-209ENST00000565511 GTF2F2P13984 249 aa18.71■□□□□ 0.59
RAB40C-209ENST00000565511 GZMHP20718 246 aa18.71■□□□□ 0.59
RAB40C-209ENST00000565511 VHLP40337 213 aa18.71■□□□□ 0.59
RAB40C-209ENST00000565511 ST3GAL4Q11206 333 aa18.71■□□□□ 0.59
RAB40C-209ENST00000565511 GLIPR1L1Q6UWM5 242 aa18.71■□□□□ 0.59
RAB40C-209ENST00000565511 OR52M1Q8NGK5 317 aa18.71■□□□□ 0.59
RAB40C-209ENST00000565511 S100A13Q99584 98 aa18.71■□□□□ 0.59
RAB40C-209ENST00000565511 BANF2Q9H503 90 aa18.71■□□□□ 0.59
RAB40C-209ENST00000565511 GAPDHP04406 335 aaKnown RBP18.7■□□□□ 0.58
RAB40C-209ENST00000565511 THBS3P49746 956 aa18.7■□□□□ 0.58
RAB40C-209ENST00000565511 ZNF134P52741 427 aa18.7■□□□□ 0.58
RAB40C-209ENST00000565511 YIF1BQ5BJH7 314 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms