RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 PAXXQ9BUH6 204 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 RAB1BQ9H0U4 201 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 VSIG4Q9Y279 399 aa4.51□□□□□ -1.69
SMG1-211ENST00000565324 PQLC2LA1A4F0 135 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 FCGR3BO75015 233 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 KBTBD11O94819 623 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 ZNF735P0CB33 412 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 CXCL3P19876 107 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 FAM209AQ5JX71 171 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 ZNF770Q6IQ21 691 aaPredicted RBP4.5□□□□□ -1.69
SMG1-211ENST00000565324 TMEM108Q6UXF1 575 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 PQLC2Q6ZP29 291 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 OR10J6PQ8NGY7 276 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 MARVELD3Q96A59 401 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 GEMIN7Q9H840 131 aaKnown RBP4.5□□□□□ -1.69
SMG1-211ENST00000565324 PPIL1Q9Y3C6 166 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 MPC1Q9Y5U8 109 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 A0A0A6YYD5 115 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 TMEM210A6NLX4 147 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 WNT9BO14905 357 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 SPRY1O43609 319 aaPredicted RBP4.5□□□□□ -1.69
SMG1-211ENST00000565324 SS18L1O75177 396 aaPredicted RBP4.5□□□□□ -1.69
SMG1-211ENST00000565324 HSPB1P04792 205 aaKnown RBP4.5□□□□□ -1.69
SMG1-211ENST00000565324 GZMHP20718 246 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 FAM78AQ5JUQ0 283 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 CLEC18BQ6UXF7 455 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 LINC00518Q8N0U6 118 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 CYB561D1Q8N8Q1 229 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 FREM3P0C091 2139 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 PPYP01298 95 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 B4GALT1P15291 398 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 CCDC144NLQ6NUI1 221 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 OR4X1Q8NH49 305 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 V9GYH0 126 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 SIPA1L1O43166 1804 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 A0A0B4J2E0 115 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 A0A1B0GX12 115 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 CD74P04233 296 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 OR4A8P0C604 315 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 EPHA8P29322 1005 aaPredicted RBP4.5□□□□□ -1.69
SMG1-211ENST00000565324 POLR2GP62487 172 aaKnown RBP eCLIP4.5□□□□□ -1.69
SMG1-211ENST00000565324 CEACAM16Q2WEN9 425 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 OR10D3Q8NH80 312 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 PTPMT1Q8WUK0 201 aaPredicted RBP4.5□□□□□ -1.69
SMG1-211ENST00000565324 PLEKHB1Q9UF11 243 aaPredicted RBP4.5□□□□□ -1.69
SMG1-211ENST00000565324 KCNE5Q9UJ90 142 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 KIAA2026Q5HYC2 2103 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 SIGLEC5O15389 551 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 ZGLP1P0C6A0 271 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 PCMT1P22061 227 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 DUSP2Q05923 314 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 ZNF77Q15935 545 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 MOGAT3Q86VF5 341 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 SPNS2Q8IVW8 549 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 PTX4Q96A99 478 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 SCNM1Q9BWG6 230 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 PAGE4O60829 102 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 AMY1AP04745 511 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 TCTN1Q2MV58 587 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 TRMT61AQ96FX7 289 aaKnown RBP4.5□□□□□ -1.69
SMG1-211ENST00000565324 MRGPRX3Q96LB0 322 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 CACNA1IQ9P0X4 2223 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 BTAF1O14981 1849 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 C1QTNF9BB2RNN3 333 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 MKRN2OSH3BPM6 223 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 CXCL13O43927 109 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 HERPUD1Q15011 391 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 TMEM45BQ96B21 275 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 HIGD1AQ9Y241 93 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 DOCK8Q8NF50 2099 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 MOSPD3O75425 235 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 SELENOPP49908 381 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 FMODQ06828 376 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 TMEM78Q5T7P6 136 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 WFDC8Q8IUA0 241 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 FLYWCH2Q96CP2 140 aaKnown RBP4.5□□□□□ -1.69
SMG1-211ENST00000565324 QTRT1Q9BXR0 403 aaKnown RBP4.5□□□□□ -1.69
SMG1-211ENST00000565324 TCRBV16S1A1N1A0A5B0 115 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 OR11H12B2RN74 326 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 HIST1H1AQ02539 215 aaPredicted RBP4.5□□□□□ -1.69
SMG1-211ENST00000565324 SKP2Q13309 424 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 WDR38Q5JTN6 314 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 ZNF683Q8IZ20 524 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 OR11H1Q8NG94 326 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 OR11H2Q8NH07 326 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 NT5CQ8TCD5 201 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 MRGPRX1Q96LB2 322 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 ALKBH7Q9BT30 221 aaPredicted RBP4.5□□□□□ -1.69
SMG1-211ENST00000565324 NRSN2Q9GZP1 204 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 FOXJ2Q9P0K8 574 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 THAP10Q9P2Z0 257 aaPredicted RBP4.5□□□□□ -1.69
SMG1-211ENST00000565324 ABCA1O95477 2261 aa4.5□□□□□ -1.69
SMG1-211ENST00000565324 SOCS7O14512 581 aa4.49□□□□□ -1.69
SMG1-211ENST00000565324 CFDP00746 253 aaPredicted RBP4.49□□□□□ -1.69
SMG1-211ENST00000565324 CAPZBP47756 277 aa4.49□□□□□ -1.69
SMG1-211ENST00000565324 ASCL3Q9NQ33 180 aa4.49□□□□□ -1.69
SMG1-211ENST00000565324 PHLDA3Q9Y5J5 127 aa4.49□□□□□ -1.69
SMG1-211ENST00000565324 PARP14Q460N5 1801 aa4.49□□□□□ -1.69
SMG1-211ENST00000565324 TRAV9-1A0A075B6T8 112 aa4.49□□□□□ -1.69
SMG1-211ENST00000565324 LILRA5A6NI73 299 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms