RNA–Protein interactions for RNA: ENST00000565236.1

CLN3-215, Transcript of CLN3, battenin, humanhuman

TSL 3

Gene CLN3, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-215ENST00000565236 GNAO1P09471 354 aa17.9■□□□□ 0.46
CLN3-215ENST00000565236 FAM90A15PP0C7V4 464 aa17.9■□□□□ 0.46
CLN3-215ENST00000565236 FAM90A13PP0C7W8 464 aa17.9■□□□□ 0.46
CLN3-215ENST00000565236 FAM90A14PP0C7W9 464 aa17.9■□□□□ 0.46
CLN3-215ENST00000565236 FAM90A24PP0C7X0 464 aa17.9■□□□□ 0.46
CLN3-215ENST00000565236 RAB7AP51149 207 aa17.9■□□□□ 0.46
CLN3-215ENST00000565236 HES1Q14469 280 aa17.9■□□□□ 0.46
CLN3-215ENST00000565236 KPRPQ5T749 579 aaPredicted RBP17.9■□□□□ 0.46
CLN3-215ENST00000565236 STX19Q8N4C7 294 aa17.9■□□□□ 0.46
CLN3-215ENST00000565236 JAGN1Q8N5M9 183 aa17.9■□□□□ 0.46
CLN3-215ENST00000565236 DRAM1Q8N682 238 aa17.9■□□□□ 0.46
CLN3-215ENST00000565236 MRPS28Q9Y2Q9 187 aaKnown RBP17.9■□□□□ 0.46
CLN3-215ENST00000565236 MOB4Q9Y3A3 225 aa17.9■□□□□ 0.46
CLN3-215ENST00000565236 TRBV5-7A0A0A0MS05 114 aa17.89■□□□□ 0.45
CLN3-215ENST00000565236 TCRBV4S1A1TA0A5B7 111 aa17.89■□□□□ 0.45
CLN3-215ENST00000565236 MAGEA13PA6NCF6 341 aa17.89■□□□□ 0.45
CLN3-215ENST00000565236 FSTP19883 344 aa17.89■□□□□ 0.45
CLN3-215ENST00000565236 OXLD1Q5BKU9 147 aa17.89■□□□□ 0.45
CLN3-215ENST00000565236 OR8H3Q8N146 312 aa17.89■□□□□ 0.45
CLN3-215ENST00000565236 CCDC107Q8WV48 283 aa17.89■□□□□ 0.45
CLN3-215ENST00000565236 ARL11Q969Q4 196 aa17.89■□□□□ 0.45
CLN3-215ENST00000565236 MUL1Q969V5 352 aa17.89■□□□□ 0.45
CLN3-215ENST00000565236 SPACA1Q9HBV2 294 aa17.89■□□□□ 0.45
CLN3-215ENST00000565236 PLCXD1Q9NUJ7 323 aa17.89■□□□□ 0.45
CLN3-215ENST00000565236 PSORS1C1Q9UIG5 152 aa17.89■□□□□ 0.45
CLN3-215ENST00000565236 A0A1W2PPE3 182 aa17.88■□□□□ 0.45
CLN3-215ENST00000565236 A0A1W2PPI3 338 aa17.88■□□□□ 0.45
CLN3-215ENST00000565236 MYL12BO14950 172 aa17.88■□□□□ 0.45
CLN3-215ENST00000565236 CELP19835 753 aa17.88■□□□□ 0.45
CLN3-215ENST00000565236 DIAPH2-AS1Q14236 149 aa17.88■□□□□ 0.45
CLN3-215ENST00000565236 GLIPR1L1Q6UWM5 242 aa17.88■□□□□ 0.45
CLN3-215ENST00000565236 AHSA2Q719I0 299 aa17.88■□□□□ 0.45
CLN3-215ENST00000565236 CDH26Q8IXH8 852 aa17.88■□□□□ 0.45
CLN3-215ENST00000565236 BPIFB6Q8NFQ5 453 aa17.88■□□□□ 0.45
CLN3-215ENST00000565236 OR4X2Q8NGF9 303 aa17.88■□□□□ 0.45
CLN3-215ENST00000565236 MRPS24Q96EL2 167 aaKnown RBP17.88■□□□□ 0.45
CLN3-215ENST00000565236 TSSC4Q9Y5U2 329 aaPredicted RBP17.88■□□□□ 0.45
CLN3-215ENST00000565236 MCRIP1C9JLW8 97 aa17.87■□□□□ 0.45
CLN3-215ENST00000565236 SDCBPO00560 298 aaPredicted RBP17.87■□□□□ 0.45
CLN3-215ENST00000565236 ORC5O43913 435 aa17.87■□□□□ 0.45
CLN3-215ENST00000565236 MT-ND4P03905 459 aa17.87■□□□□ 0.45
CLN3-215ENST00000565236 MAS1P04201 325 aa17.87■□□□□ 0.45
CLN3-215ENST00000565236 PF4V1P10720 104 aa17.87■□□□□ 0.45
CLN3-215ENST00000565236 TMEM11P17152 192 aa17.87■□□□□ 0.45
CLN3-215ENST00000565236 WNT4P56705 351 aa17.87■□□□□ 0.45
CLN3-215ENST00000565236 HNF4GQ14541 408 aa17.87■□□□□ 0.45
CLN3-215ENST00000565236 TCTEX1D4Q5JR98 221 aa17.87■□□□□ 0.45
CLN3-215ENST00000565236 OGFRL1Q5TC84 451 aaPredicted RBP17.87■□□□□ 0.45
CLN3-215ENST00000565236 LAIR2Q6ISS4 152 aa17.87■□□□□ 0.45
CLN3-215ENST00000565236 ZNF497Q6ZNH5 498 aa17.87■□□□□ 0.45
CLN3-215ENST00000565236 OR52M1Q8NGK5 317 aa17.87■□□□□ 0.45
CLN3-215ENST00000565236 MYDGFQ969H8 173 aa17.87■□□□□ 0.45
CLN3-215ENST00000565236 C15orf65H3BRN8 121 aa17.86■□□□□ 0.45
CLN3-215ENST00000565236 AIPO00170 330 aa17.86■□□□□ 0.45
CLN3-215ENST00000565236 PRB2P02812 416 aaPredicted RBP17.86■□□□□ 0.45
CLN3-215ENST00000565236 GAPDHP04406 335 aaKnown RBP17.86■□□□□ 0.45
CLN3-215ENST00000565236 DOC2BQ14184 412 aa17.86■□□□□ 0.45
CLN3-215ENST00000565236 AWAT2Q6E213 333 aa17.86■□□□□ 0.45
CLN3-215ENST00000565236 UBALD1Q8TB05 177 aa17.86■□□□□ 0.45
CLN3-215ENST00000565236 DERL3Q96Q80 235 aa17.86■□□□□ 0.45
CLN3-215ENST00000565236 ERGIC3Q9Y282 383 aa17.86■□□□□ 0.45
CLN3-215ENST00000565236 CCRL2O00421 344 aa17.85■□□□□ 0.45
CLN3-215ENST00000565236 HSD17B6O14756 317 aa17.85■□□□□ 0.45
CLN3-215ENST00000565236 CASQ2O14958 399 aaPredicted RBP17.85■□□□□ 0.45
CLN3-215ENST00000565236 CD1AP06126 327 aa17.85■□□□□ 0.45
CLN3-215ENST00000565236 CD33P20138 364 aa17.85■□□□□ 0.45
CLN3-215ENST00000565236 KHDC1LQ5JSQ8 128 aa17.85■□□□□ 0.45
CLN3-215ENST00000565236 C10orf99Q6UWK7 81 aa17.85■□□□□ 0.45
CLN3-215ENST00000565236 REC114Q7Z4M0 266 aa17.85■□□□□ 0.45
CLN3-215ENST00000565236 MOB3BQ86TA1 216 aa17.85■□□□□ 0.45
CLN3-215ENST00000565236 NANOGP1Q8N7R0 232 aa17.85■□□□□ 0.45
CLN3-215ENST00000565236 FBLIM1Q8WUP2 373 aa17.85■□□□□ 0.45
CLN3-215ENST00000565236 SGCDQ92629 289 aa17.85■□□□□ 0.45
CLN3-215ENST00000565236 THRSPQ92748 146 aa17.85■□□□□ 0.45
CLN3-215ENST00000565236 VCXQ9H320 206 aa17.85■□□□□ 0.45
CLN3-215ENST00000565236 TRAPPC2LQ9UL33 140 aa17.85■□□□□ 0.45
CLN3-215ENST00000565236 IGKV1D-33P01593 117 aa17.84■□□□□ 0.45
CLN3-215ENST00000565236 IGKV1-33P01594 117 aa17.84■□□□□ 0.45
CLN3-215ENST00000565236 ZNF816Q0VGE8 651 aaPredicted RBP17.84■□□□□ 0.45
CLN3-215ENST00000565236 RAB12Q6IQ22 244 aa17.84■□□□□ 0.45
CLN3-215ENST00000565236 LINC00311Q8N616 119 aa17.84■□□□□ 0.45
CLN3-215ENST00000565236 C8orf31Q8N9H6 132 aa17.84■□□□□ 0.45
CLN3-215ENST00000565236 WFDC9Q8NEX5 89 aa17.84■□□□□ 0.45
CLN3-215ENST00000565236 SELENOIQ9C0D9 397 aa17.84■□□□□ 0.45
CLN3-215ENST00000565236 BANF2Q9H503 90 aa17.84■□□□□ 0.45
CLN3-215ENST00000565236 RAB9BQ9NP90 201 aa17.84■□□□□ 0.45
CLN3-215ENST00000565236 GFOD1Q9NXC2 390 aa17.84■□□□□ 0.45
CLN3-215ENST00000565236 ETAA1Q9NY74 926 aa17.84■□□□□ 0.45
CLN3-215ENST00000565236 RCC2Q9P258 522 aaKnown RBP17.84■□□□□ 0.45
CLN3-215ENST00000565236 PEX16Q9Y5Y5 336 aa17.84■□□□□ 0.45
CLN3-215ENST00000565236 IGHV3-43A0A0B4J1X8 118 aa17.83■□□□□ 0.44
CLN3-215ENST00000565236 IGHV1-3A0A0C4DH29 117 aa17.83■□□□□ 0.44
CLN3-215ENST00000565236 PSMB11A5LHX3 300 aa17.83■□□□□ 0.44
CLN3-215ENST00000565236 PIN1P1O15428 100 aa17.83■□□□□ 0.44
CLN3-215ENST00000565236 SPINT2O43291 252 aa17.83■□□□□ 0.44
CLN3-215ENST00000565236 FGF16O43320 207 aa17.83■□□□□ 0.44
CLN3-215ENST00000565236 CRTAPO75718 401 aaPredicted RBP17.83■□□□□ 0.44
CLN3-215ENST00000565236 PF4P02776 101 aa17.83■□□□□ 0.44
CLN3-215ENST00000565236 IGHV3-43DP0DP04 118 aa17.83■□□□□ 0.44
CLN3-215ENST00000565236 MAPK3P27361 379 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms