RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 OR10X1Q8NGY0 326 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 APH1BQ8WW43 257 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 ST6GALNAC6Q969X2 333 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 RBMXL1Q96E39 390 aaKnown RBP6.75□□□□□ -1.33
CAPN3-213ENST00000565173 MRPL48Q96GC5 212 aaKnown RBP6.75□□□□□ -1.33
CAPN3-213ENST00000565173 EAF1Q96JC9 268 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-213ENST00000565173 DUX3Q96PT4 197 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 MYCBPQ99417 103 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-213ENST00000565173 GPER1Q99527 375 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 B9D2Q9BPU9 175 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 DPCDQ9BVM2 203 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-213ENST00000565173 JAM3Q9BX67 310 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 ABCG5Q9H222 651 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 VCXQ9H320 206 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 TAS2R4Q9NYW5 299 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 IL36GQ9NZH8 169 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 ST3GAL6Q9Y274 331 aa6.75□□□□□ -1.33
CAPN3-213ENST00000565173 RRP15Q9Y3B9 282 aaKnown RBP6.75□□□□□ -1.33
CAPN3-213ENST00000565173 SIRT4Q9Y6E7 314 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-213ENST00000565173 DYNC2H1Q8NCM8 4307 aaKnown RBP6.74□□□□□ -1.33
CAPN3-213ENST00000565173 IGHV3-72A0A0B4J1Y9 119 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 LOC100130705A0A1B0GUX0 176 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 CCRL2O00421 344 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 HSD17B6O14756 317 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 GEMIN2O14893 280 aaKnown RBP6.74□□□□□ -1.33
CAPN3-213ENST00000565173 MAGEB3O15480 346 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 HTR3BO95264 441 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 GAPDHP04406 335 aaKnown RBP6.74□□□□□ -1.33
CAPN3-213ENST00000565173 REG1BP48304 166 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 RBM11P57052 281 aaKnown RBP6.74□□□□□ -1.33
CAPN3-213ENST00000565173 CD69Q07108 199 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 RSU1Q15404 277 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 KLHL22Q53GT1 634 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 SLC35E3Q7Z769 313 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 MOB3BQ86TA1 216 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 TGIF2LXQ8IUE1 241 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 ZNF695Q8IW36 515 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 LINC00311Q8N616 119 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 RNF152Q8N8N0 203 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 C8orf31Q8N9H6 132 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 Q8N9W7 124 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 KLHL30-AS1Q8NEE0 82 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 OR52M1Q8NGK5 317 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 OR52N1Q8NH53 320 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 GPR148Q8TDV2 347 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 TSEN15Q8WW01 171 aaKnown RBP6.74□□□□□ -1.33
CAPN3-213ENST00000565173 CYGBQ8WWM9 190 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 CPNE2Q96FN4 548 aaPredicted RBP6.74□□□□□ -1.33
CAPN3-213ENST00000565173 RAX2Q96IS3 184 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 Q96MT0 163 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 RDH12Q96NR8 316 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 MCRIP2Q9BUT9 160 aaKnown RBP6.74□□□□□ -1.33
CAPN3-213ENST00000565173 GPR61Q9BZJ8 451 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 FAM192AQ9GZU8 254 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 FGF20Q9NP95 211 aaPredicted RBP6.74□□□□□ -1.33
CAPN3-213ENST00000565173 FAM118AQ9NWS6 357 aa6.74□□□□□ -1.33
CAPN3-213ENST00000565173 A0A1W2PP11 408 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 NUDT19A8MXV4 375 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 ZNF736B4DX44 427 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-213ENST00000565173 CCL24O00175 119 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 OGG1O15527 345 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 ORC5O43913 435 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 MPZL2O60487 215 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 WBP4O75554 376 aaKnown RBP6.73□□□□□ -1.33
CAPN3-213ENST00000565173 OR7C1O76099 320 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-213ENST00000565173 ATP6V1G2O95670 118 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 MT-ND4P03905 459 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 RPLP1P05386 114 aaKnown RBP6.73□□□□□ -1.33
CAPN3-213ENST00000565173 IGFBP3P17936 291 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-213ENST00000565173 ZNF93P35789 620 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-213ENST00000565173 VHLP40337 213 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 GPR12P47775 334 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 CDX1P47902 265 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-213ENST00000565173 ETV1P50549 477 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 ZNF134P52741 427 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 SLC35B1P78383 322 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 CFHR3Q02985 330 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 RIPK1Q13546 671 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 SMN1Q16637 294 aaKnown RBP6.73□□□□□ -1.33
CAPN3-213ENST00000565173 PNLIPRP3Q17RR3 467 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 CCDC58Q4VC31 144 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 TTC23Q5W5X9 447 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 RPL22L1Q6P5R6 122 aaKnown RBP6.73□□□□□ -1.33
CAPN3-213ENST00000565173 TEX38Q6PEX7 206 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 ZNF497Q6ZNH5 498 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 LCNL1Q6ZST4 164 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 FOXRED2Q8IWF2 684 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 IZUMO1Q8IYV9 350 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 DHRSXQ8N5I4 330 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 UBALD1Q8TB05 177 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 CCDC107Q8WV48 283 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 NRG4Q8WWG1 115 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 RTN4IP1Q8WWV3 396 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-213ENST00000565173 DPF1Q92782 380 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 ARL11Q969Q4 196 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 TMEM106AQ96A25 262 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 ORAI1Q96D31 301 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 METTL9Q9H1A3 318 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 TMEM138Q9NPI0 162 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms