RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 A0A1W2PPI3 338 aa14.08□□□□□ -0.16
NME3-205ENST00000563854 AIPO00170 330 aa14.08□□□□□ -0.16
NME3-205ENST00000563854 SDCBPO00560 298 aaPredicted RBP14.08□□□□□ -0.16
NME3-205ENST00000563854 ZNF780AO75290 641 aaPredicted RBP14.08□□□□□ -0.16
NME3-205ENST00000563854 AMY1AP04745 511 aa14.08□□□□□ -0.16
NME3-205ENST00000563854 AMY2AP04746 511 aa14.08□□□□□ -0.16
NME3-205ENST00000563854 IGHV3-43DP0DP04 118 aa14.08□□□□□ -0.16
NME3-205ENST00000563854 TMEM11P17152 192 aa14.08□□□□□ -0.16
NME3-205ENST00000563854 FSTP19883 344 aa14.08□□□□□ -0.16
NME3-205ENST00000563854 REG1BP48304 166 aa14.08□□□□□ -0.16
NME3-205ENST00000563854 PAX5Q02548 391 aa14.08□□□□□ -0.16
NME3-205ENST00000563854 AWAT2Q6E213 333 aa14.08□□□□□ -0.16
NME3-205ENST00000563854 C10orf99Q6UWK7 81 aa14.08□□□□□ -0.16
NME3-205ENST00000563854 GLIPR1L1Q6UWM5 242 aa14.08□□□□□ -0.16
NME3-205ENST00000563854 OR4X2Q8NGF9 303 aa14.08□□□□□ -0.16
NME3-205ENST00000563854 ARL11Q969Q4 196 aa14.08□□□□□ -0.16
NME3-205ENST00000563854 LINC00574Q9H8X3 128 aa14.08□□□□□ -0.16
NME3-205ENST00000563854 PRKDCP78527 4128 aaKnown RBP14.08□□□□□ -0.16
NME3-205ENST00000563854 PLXNB1O43157 2135 aa14.08□□□□□ -0.16
NME3-205ENST00000563854 ANKRD65E5RJM6 399 aa14.07□□□□□ -0.16
NME3-205ENST00000563854 M0QZK8 103 aa14.07□□□□□ -0.16
NME3-205ENST00000563854 HSD17B6O14756 317 aa14.07□□□□□ -0.16
NME3-205ENST00000563854 PF4P02776 101 aa14.07□□□□□ -0.16
NME3-205ENST00000563854 CELP19835 753 aa14.07□□□□□ -0.16
NME3-205ENST00000563854 RAB7AP51149 207 aa14.07□□□□□ -0.16
NME3-205ENST00000563854 CD83Q01151 205 aa14.07□□□□□ -0.16
NME3-205ENST00000563854 GPR176Q14439 515 aa14.07□□□□□ -0.16
NME3-205ENST00000563854 ZNF485Q8NCK3 441 aa14.07□□□□□ -0.16
NME3-205ENST00000563854 OR10A7Q8NGE5 316 aa14.07□□□□□ -0.16
NME3-205ENST00000563854 SGCDQ92629 289 aa14.07□□□□□ -0.16
NME3-205ENST00000563854 MYDGFQ969H8 173 aa14.07□□□□□ -0.16
NME3-205ENST00000563854 BANF2Q9H503 90 aa14.07□□□□□ -0.16
NME3-205ENST00000563854 CNOT2Q9NZN8 540 aaKnown RBP14.07□□□□□ -0.16
NME3-205ENST00000563854 PSORS1C1Q9UIG5 152 aa14.07□□□□□ -0.16
NME3-205ENST00000563854 TRBV5-7A0A0A0MS05 114 aa14.06□□□□□ -0.16
NME3-205ENST00000563854 IGHV3-72A0A0B4J1Y9 119 aa14.06□□□□□ -0.16
NME3-205ENST00000563854 IGKV1D-33P01593 117 aa14.06□□□□□ -0.16
NME3-205ENST00000563854 IGKV1-33P01594 117 aa14.06□□□□□ -0.16
NME3-205ENST00000563854 CD33P20138 364 aa14.06□□□□□ -0.16
NME3-205ENST00000563854 GZMHP20718 246 aa14.06□□□□□ -0.16
NME3-205ENST00000563854 WNT4P56705 351 aa14.06□□□□□ -0.16
NME3-205ENST00000563854 TCTEX1D4Q5JR98 221 aa14.06□□□□□ -0.16
NME3-205ENST00000563854 OGFRL1Q5TC84 451 aaPredicted RBP14.06□□□□□ -0.16
NME3-205ENST00000563854 LAIR2Q6ISS4 152 aa14.06□□□□□ -0.16
NME3-205ENST00000563854 FAM53AQ6NSI3 398 aaPredicted RBP14.06□□□□□ -0.16
NME3-205ENST00000563854 MOB3BQ86TA1 216 aa14.06□□□□□ -0.16
NME3-205ENST00000563854 OR8H3Q8N146 312 aa14.06□□□□□ -0.16
NME3-205ENST00000563854 PRR18Q8N4B5 295 aa14.06□□□□□ -0.16
NME3-205ENST00000563854 DERL3Q96Q80 235 aa14.06□□□□□ -0.16
NME3-205ENST00000563854 VCXQ9H320 206 aa14.06□□□□□ -0.16
NME3-205ENST00000563854 TRAPPC2LQ9UL33 140 aa14.06□□□□□ -0.16
NME3-205ENST00000563854 TSSC4Q9Y5U2 329 aaPredicted RBP14.06□□□□□ -0.16
NME3-205ENST00000563854 MCRIP1C9JLW8 97 aa14.05□□□□□ -0.16
NME3-205ENST00000563854 CCRL2O00421 344 aa14.05□□□□□ -0.16
NME3-205ENST00000563854 GPX5O75715 221 aa14.05□□□□□ -0.16
NME3-205ENST00000563854 CRTAPO75718 401 aaPredicted RBP14.05□□□□□ -0.16
NME3-205ENST00000563854 DOC2BQ14184 412 aa14.05□□□□□ -0.16
NME3-205ENST00000563854 KPRPQ5T749 579 aaPredicted RBP14.05□□□□□ -0.16
NME3-205ENST00000563854 ZNF497Q6ZNH5 498 aa14.05□□□□□ -0.16
NME3-205ENST00000563854 SLC16A12Q6ZSM3 486 aa14.05□□□□□ -0.16
NME3-205ENST00000563854 THNSL2Q86YJ6 484 aa14.05□□□□□ -0.16
NME3-205ENST00000563854 OR4K15Q8NH41 348 aa14.05□□□□□ -0.16
NME3-205ENST00000563854 SELENOIQ9C0D9 397 aa14.05□□□□□ -0.16
NME3-205ENST00000563854 ETAA1Q9NY74 926 aa14.05□□□□□ -0.16
NME3-205ENST00000563854 PSMB11A5LHX3 300 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 FAM90A18PA6NE21 464 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 FAM90A16PA6NEW6 464 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 FAM90A20PA6NIJ5 464 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 FAM90A9PA6NNJ1 464 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 FAM90A12PA8MX19 464 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 FAM90A5PA8MXJ8 464 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 C15orf65H3BRN8 121 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 MT-ND4P03905 459 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 FAM90A15PP0C7V4 464 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 FAM90A13PP0C7W8 464 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 FAM90A14PP0C7W9 464 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 FAM90A24PP0C7X0 464 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 VHLP40337 213 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 RAB12Q6IQ22 244 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 C5orf56Q8N8D9 126 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 OR10V1Q8NGI7 309 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 FAM46BQ96A09 425 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 PHF21AQ96BD5 680 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 SPACA1Q9HBV2 294 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 GFOD1Q9NXC2 390 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 ERGIC3Q9Y282 383 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 PEX16Q9Y5Y5 336 aa14.04□□□□□ -0.16
NME3-205ENST00000563854 IGHV1-3A0A0C4DH29 117 aa14.03□□□□□ -0.16
NME3-205ENST00000563854 PIN1P1O15428 100 aa14.03□□□□□ -0.16
NME3-205ENST00000563854 ORC5O43913 435 aa14.03□□□□□ -0.16
NME3-205ENST00000563854 GAPDHP04406 335 aaKnown RBP14.03□□□□□ -0.16
NME3-205ENST00000563854 IGLL1P15814 213 aa14.03□□□□□ -0.16
NME3-205ENST00000563854 MGMTP16455 207 aa14.03□□□□□ -0.16
NME3-205ENST00000563854 IL3RAP26951 378 aa14.03□□□□□ -0.16
NME3-205ENST00000563854 MAPK3P27361 379 aaPredicted RBP14.03□□□□□ -0.16
NME3-205ENST00000563854 SYT6Q5T7P8 510 aaPredicted RBP14.03□□□□□ -0.16
NME3-205ENST00000563854 ZNF329Q86UD4 541 aa14.03□□□□□ -0.16
NME3-205ENST00000563854 TMEM104Q8NE00 496 aa14.03□□□□□ -0.16
NME3-205ENST00000563854 NOL4LQ96MY1 436 aaPredicted RBP14.03□□□□□ -0.16
NME3-205ENST00000563854 PLCXD1Q9NUJ7 323 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms