RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 SULT4A1Q9BR01 284 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 TMEM59Q9BXS4 323 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 CST11Q9H112 138 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 GAL3ST2Q9H3Q3 398 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 ZMAT3Q9HA38 289 aaKnown RBP6.92□□□□□ -1.3
UBR1-204ENST00000563239 PLGRKTQ9HBL7 147 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 ZNF286AQ9HBT8 521 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 SPACA1Q9HBV2 294 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 TNFRSF19Q9NS68 423 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 CALYQ9NYX4 217 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 FAM96BQ9Y3D0 163 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 POMT1Q9Y6A1 747 aa6.92□□□□□ -1.3
UBR1-204ENST00000563239 KIAA2026Q5HYC2 2103 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 A0A087WXM4 84 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 A0A0B4J203 849 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 TMEM272A0A1B0GTI8 110 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 UBE2QL1A1L167 161 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 SMIM30A4D0T7 59 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 FAM172BPA6NC97 362 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 IFITM5A6NNB3 132 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 MCRIP1C9JLW8 97 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 LY6LH3BQJ8 138 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 SOCS1O15524 211 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 IL1AP01583 271 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 ARG1P05089 322 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 CLEC2LP0C7M8 214 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 SMIM18P0DKX4 95 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 HKR1P10072 659 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 SLC2A2P11168 524 aaPredicted RBP6.91□□□□□ -1.3
UBR1-204ENST00000563239 RAB3BP20337 219 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 COMPP49747 757 aaPredicted RBP6.91□□□□□ -1.3
UBR1-204ENST00000563239 PSMD7P51665 324 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 EFNB2P52799 333 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 TMEM50BP56557 158 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 RELBQ01201 579 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 HES5Q5TA89 166 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 C16orf87Q6PH81 154 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 C6orf201Q7Z4U5 140 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 ABHD12Q8N2K0 398 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 ZNF565Q8N9K5 539 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 RFESDQ8TAC1 157 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 MRPL30Q8TCC3 161 aaKnown RBP6.91□□□□□ -1.3
UBR1-204ENST00000563239 CHCHD6Q9BRQ6 235 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 FAAP24Q9BTP7 215 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 CENPOQ9BU64 300 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 CLEC7AQ9BXN2 247 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 ETAA1Q9NY74 926 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 IDI2-AS1Q9NZ38 188 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 STEAP1Q9UHE8 339 aa6.91□□□□□ -1.3
UBR1-204ENST00000563239 TBL2Q9Y4P3 447 aaKnown RBP6.91□□□□□ -1.3
UBR1-204ENST00000563239 FAM181BA6NEQ2 426 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 VGLL3A8MV65 326 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 C12orf77C9JDV5 145 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 AIPO00170 330 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 F2RL2O00254 374 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 PDCD5O14737 125 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 WIPF1O43516 503 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 ORC5O43913 435 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 GPR137BO60478 399 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 PAHP00439 452 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 RCC1P18754 421 aaPredicted RBP6.9□□□□□ -1.3
UBR1-204ENST00000563239 GZMHP20718 246 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 MYL9P24844 172 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 SDC2P34741 201 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 TGFBR1P36897 503 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 LOXL3P58215 753 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 DYNC1I2Q13409 638 aaKnown RBP6.9□□□□□ -1.3
UBR1-204ENST00000563239 RBM39Q14498 530 aaKnown RBP6.9□□□□□ -1.3
UBR1-204ENST00000563239 AANATQ16613 207 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 PLAC9Q5JTB6 97 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 NKAPLQ5M9Q1 402 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 MINOS1Q5TGZ0 78 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 OR52W1Q6IF63 320 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 OR4K15Q8NH41 348 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 UBALD1Q8TB05 177 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 NEK7Q8TDX7 302 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 LEAP2Q969E1 77 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 MALSU1Q96EH3 234 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 SSX3Q99909 188 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 MBNL3Q9NUK0 354 aaKnown RBP6.9□□□□□ -1.3
UBR1-204ENST00000563239 C1RLQ9NZP8 487 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 SSR3Q9UNL2 185 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 MINOS1-NBL1R4GNA1 71 aa6.9□□□□□ -1.3
UBR1-204ENST00000563239 LOC100506127A0A0U1RQW1 187 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 NOTOA8MTQ0 251 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 H3BUX3 64 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 CA11O75493 328 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 NAPSAO96009 420 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 IGHV3-7P01780 117 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 NFYBP25208 207 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 BLVRBP30043 206 aaPredicted RBP6.89□□□□□ -1.31
UBR1-204ENST00000563239 VEGFCP49767 419 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 RAB13P51153 203 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 LGALS4P56470 323 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 SSX2Q16385 188 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 LTC4SQ16873 150 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 LRRC75BQ2VPJ9 315 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 MOGAT2Q3SYC2 334 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 PLA1AQ53H76 456 aa6.89□□□□□ -1.31
UBR1-204ENST00000563239 FBLN7Q53RD9 439 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms