RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 RPRD1BQ9NQG5 326 aaKnown RBP0.88□□□□□ -2.27
CHD9-207ENST00000562806 DDX18Q9NVP1 670 aaKnown RBP0.88□□□□□ -2.27
CHD9-207ENST00000562806 TXNL4BQ9NX01 149 aaKnown RBP0.88□□□□□ -2.27
CHD9-207ENST00000562806 PSMD13Q9UNM6 376 aa0.88□□□□□ -2.27
CHD9-207ENST00000562806 USH1CQ9Y6N9 552 aa0.88□□□□□ -2.27
CHD9-207ENST00000562806 COL4A2P08572 1712 aa0.88□□□□□ -2.27
CHD9-207ENST00000562806 TRAV8-2A0A0B4J237 113 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 MUC21A0A0G2JKD1 596 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 MUC21A0A140T8X8 626 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 GOLGA8IPA6NC78 632 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 FNDC10F2Z333 226 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 RNASEK-C17orf49H0YIS7 233 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 BOLA2-SMG1P6H3BVE0 249 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 OTCP00480 354 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 LTAP01374 205 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 GPX1P07203 203 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 FBP1P09467 338 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 AKR1C4P17516 323 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 SPAM1P38567 509 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 MAGEA3P43357 314 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 C1QTNF8P60827 252 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 VSNL1P62760 191 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 ZNF117Q03924 483 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 PAFAH1B3Q15102 231 aaKnown RBP0.87□□□□□ -2.27
CHD9-207ENST00000562806 SS18Q15532 418 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 SDIM1Q6ZPB5 146 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 Q6ZRU5 148 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 Q6ZSA8 131 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 FAM183BPQ6ZVS7 135 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 SSX6Q7RTT6 188 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 C10orf126Q8N4M7 172 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 LGALS14Q8TCE9 139 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 ZMYND19Q96E35 227 aaPredicted RBP0.87□□□□□ -2.27
CHD9-207ENST00000562806 ZNF396Q96N95 335 aaPredicted RBP0.87□□□□□ -2.27
CHD9-207ENST00000562806 ZNF251Q9BRH9 671 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 FAAP24Q9BTP7 215 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 BEX2Q9BXY8 128 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 EBPLQ9BY08 206 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 SMDT1Q9H4I9 107 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 CRLF2Q9HC73 371 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 WASHC3Q9Y3C0 194 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 FIS1Q9Y3D6 152 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 ADGRB3O60242 1522 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 ADAMTSL3P82987 1691 aa0.87□□□□□ -2.27
CHD9-207ENST00000562806 IGSF23A1L1A6 192 aa0.86□□□□□ -2.27
CHD9-207ENST00000562806 K7EN84 100 aa0.86□□□□□ -2.27
CHD9-207ENST00000562806 PSMD11O00231 422 aa0.86□□□□□ -2.27
CHD9-207ENST00000562806 CRXO43186 299 aaPredicted RBP0.86□□□□□ -2.27
CHD9-207ENST00000562806 ZNF189O75820 626 aaPredicted RBP0.86□□□□□ -2.27
CHD9-207ENST00000562806 ZNF3P17036 446 aa0.86□□□□□ -2.27
CHD9-207ENST00000562806 LPAR6P43657 344 aa0.86□□□□□ -2.27
CHD9-207ENST00000562806 RWDD2BP57060 319 aa0.86□□□□□ -2.27
CHD9-207ENST00000562806 PRDX1Q06830 199 aaKnown RBP0.86□□□□□ -2.27
CHD9-207ENST00000562806 TSPAN31Q12999 210 aa0.86□□□□□ -2.27
CHD9-207ENST00000562806 HTR4Q13639 388 aa0.86□□□□□ -2.27
CHD9-207ENST00000562806 TRIP13Q15645 432 aaPredicted RBP0.86□□□□□ -2.27
CHD9-207ENST00000562806 HNRNPA1L2Q32P51 320 aaKnown RBP0.86□□□□□ -2.27
CHD9-207ENST00000562806 DGAT2L6Q6ZPD8 337 aa0.86□□□□□ -2.27
CHD9-207ENST00000562806 CLEC20AQ6ZU45 233 aa0.86□□□□□ -2.27
CHD9-207ENST00000562806 FAM19A1Q7Z5A9 133 aa0.86□□□□□ -2.27
CHD9-207ENST00000562806 SELENOHQ8IZQ5 122 aaKnown RBP0.86□□□□□ -2.27
CHD9-207ENST00000562806 KIAA1143Q96AT1 154 aaPredicted RBP0.86□□□□□ -2.27
CHD9-207ENST00000562806 GALMQ96C23 342 aa0.86□□□□□ -2.27
CHD9-207ENST00000562806 MRPS24Q96EL2 167 aaKnown RBP0.86□□□□□ -2.27
CHD9-207ENST00000562806 GLT1D1Q96MS3 346 aa0.86□□□□□ -2.27
CHD9-207ENST00000562806 NAP1L5Q96NT1 182 aaPredicted RBP0.86□□□□□ -2.27
CHD9-207ENST00000562806 MND1Q9BWT6 205 aa0.86□□□□□ -2.27
CHD9-207ENST00000562806 TSSK6Q9BXA6 273 aa0.86□□□□□ -2.27
CHD9-207ENST00000562806 BZW2Q9Y6E2 419 aaKnown RBP0.86□□□□□ -2.27
CHD9-207ENST00000562806 PTPRJQ12913 1337 aa0.86□□□□□ -2.27
CHD9-207ENST00000562806 DOCK10Q96BY6 2186 aa0.86□□□□□ -2.27
CHD9-207ENST00000562806 MGAT4DA6NG13 374 aa0.85□□□□□ -2.27
CHD9-207ENST00000562806 H3BSA7 217 aa0.85□□□□□ -2.27
CHD9-207ENST00000562806 FGF16O43320 207 aa0.85□□□□□ -2.27
CHD9-207ENST00000562806 SPNP16150 400 aa0.85□□□□□ -2.27
CHD9-207ENST00000562806 TSPOP30536 169 aa0.85□□□□□ -2.27
CHD9-207ENST00000562806 MP68P56378 58 aa0.85□□□□□ -2.27
CHD9-207ENST00000562806 KIF27Q86VH2 1401 aa0.85□□□□□ -2.27
CHD9-207ENST00000562806 ZBTB8OSQ8IWT0 167 aa0.85□□□□□ -2.27
CHD9-207ENST00000562806 ZFAND2AQ8N6M9 145 aa0.85□□□□□ -2.27
CHD9-207ENST00000562806 ASCC1Q8N9N2 400 aaKnown RBP0.85□□□□□ -2.27
CHD9-207ENST00000562806 GATD1Q8NB37 220 aa0.85□□□□□ -2.27
CHD9-207ENST00000562806 OR4A15Q8NGL6 344 aa0.85□□□□□ -2.27
CHD9-207ENST00000562806 ZNF563Q8TA94 476 aa0.85□□□□□ -2.27
CHD9-207ENST00000562806 Q9BRP9 147 aa0.85□□□□□ -2.27
CHD9-207ENST00000562806 TAPBPLQ9BX59 468 aa0.85□□□□□ -2.27
CHD9-207ENST00000562806 SHANK3Q9BYB0 1731 aa0.85□□□□□ -2.27
CHD9-207ENST00000562806 RMND1Q9NWS8 449 aa0.85□□□□□ -2.27
CHD9-207ENST00000562806 NDUFB11Q9NX14 153 aa0.85□□□□□ -2.27
CHD9-207ENST00000562806 SCML1Q9UN30 329 aa0.85□□□□□ -2.27
CHD9-207ENST00000562806 TBL2Q9Y4P3 447 aaKnown RBP0.85□□□□□ -2.27
CHD9-207ENST00000562806 MTCH2Q9Y6C9 303 aa0.85□□□□□ -2.27
CHD9-207ENST00000562806 COL18A1P39060 1754 aa0.85□□□□□ -2.27
CHD9-207ENST00000562806 USP42Q9H9J4 1324 aaKnown RBP0.85□□□□□ -2.27
CHD9-207ENST00000562806 OTOFQ9HC10 1997 aa0.85□□□□□ -2.27
CHD9-207ENST00000562806 FBN3Q75N90 2809 aa0.84□□□□□ -2.27
CHD9-207ENST00000562806 RTEL1-TNFRSF6BF6WH68 1400 aa0.84□□□□□ -2.27
CHD9-207ENST00000562806 CRB1P82279 1406 aa0.84□□□□□ -2.27
CHD9-207ENST00000562806 IGLV3-9A0A075B6K5 115 aa0.84□□□□□ -2.27
CHD9-207ENST00000562806 DHRS12A0PJE2 317 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms