RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 TMEM25Q86YD3 366 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 ZBTB8OSQ8IWT0 167 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 PIANPQ8IYJ0 282 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 PDIK1LQ8N165 341 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 TMEM251Q8N6I4 163 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 TMEM161BQ8NDZ6 487 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 LFNGQ8NES3 379 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 TSTD1Q8NFU3 115 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 OR5B17Q8NGF7 314 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 OR5D18Q8NGL1 313 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 OR10G4Q8NGN3 311 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 OR10Z1Q8NGY1 313 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 OR51A7Q8NH64 312 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 OR5K2Q8NHB8 316 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 PIGXQ8TBF5 258 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 SFXN5Q8TD22 340 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 CASTOR1Q8WTX7 329 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 KCTD4Q8WVF5 259 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 NELFBQ8WX92 580 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 RAD51AP1Q96B01 352 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 CREB3L1Q96BA8 519 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 OR5B12Q96R08 314 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 STACQ99469 402 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 SORT1Q99523 831 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 PHB2Q99623 299 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 EBNA1BP2Q99848 306 aaKnown RBP1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 SH3GL3Q99963 347 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 DHRS9Q9BPW9 319 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 ZNF2Q9BSG1 426 aaPredicted RBP1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 GABARAPL3Q9BY60 117 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 ARL6Q9H0F7 186 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 C1orf198Q9H425 327 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 PRORYQ9H606 182 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 RPP21Q9H633 154 aaKnown RBP1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 ZNF442Q9H7R0 627 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 PLEKHA1Q9HB21 404 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 RETNQ9HD89 108 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 FBXO6Q9NRD1 293 aaPredicted RBP1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 DDX19AQ9NUU7 478 aaKnown RBP1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 ZNF629Q9UEG4 869 aaPredicted RBP1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 ZNF222Q9UK12 451 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 WIF1Q9Y5W5 379 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 SNX10Q9Y5X0 201 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 USH1CQ9Y6N9 552 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 PIKFYVEQ9Y2I7 2098 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 CELSR3Q9NYQ7 3312 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 SPTBP11277 2137 aa1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 MN1Q10571 1320 aaPredicted RBP1.66□□□□□ -2.14
HDGFL3-202ENST00000562702 ATMQ13315 3056 aa1.65□□□□□ -2.14
HDGFL3-202ENST00000562702 SHANK1Q9Y566 2161 aa1.65□□□□□ -2.14
HDGFL3-202ENST00000562702 MED13LQ71F56 2210 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 TRAV8-7A0A075B6U6 113 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 A0A1B0GV72 72 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 GNG14A0A1W2PPG7 69 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 C7orf66A4D0T2 115 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 TVP23AA6NH52 213 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 COLCA2A8K830 154 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 ZNF705GA8MUZ8 300 aaPredicted RBP1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 H0Y980 276 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 PLPP3O14495 311 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 SLC9A3R1O14745 358 aaPredicted RBP1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 UBDO15205 165 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 PFDN6O15212 129 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 STX10O60499 249 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 SHOX2O60902 331 aaPredicted RBP1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 GATBO75879 557 aaKnown RBP1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 PTHP01270 115 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 FGF1P05230 155 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 KLK1P06870 262 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 CD3GP09693 182 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 CTXN2P0C2S0 81 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 ACSM4P0C7M7 580 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 COX5BP10606 129 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 PSKH1P11801 424 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 ZNF250P15622 560 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 ZNF14P17017 642 aaPredicted RBP1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 TCP1P17987 556 aaKnown RBP1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 MYL12AP19105 171 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 MYL9P24844 172 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 TEAD1P28347 426 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 ALDH3A1P30838 453 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 CEACAM3P40198 252 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 CDK9P50750 372 aaKnown RBP1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 IDH3GP51553 393 aaPredicted RBP1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 NCBP2P52298 156 aaKnown RBP eCLIP1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 GTF2A1P52655 376 aaPredicted RBP1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 POLR2GP62487 172 aaKnown RBP eCLIP1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 BTN3A2P78410 334 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 SEMG2Q02383 582 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 PRKCDQ05655 676 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 C2orf80Q0P641 193 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 BNIP2Q12982 314 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 TSPAN31Q12999 210 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 SRSF6Q13247 344 aaKnown RBP1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 RAB31Q13636 194 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 TPBGQ13641 420 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 CLINT1Q14677 625 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 TRIP13Q15645 432 aaPredicted RBP1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 MAPK14Q16539 360 aa1.65□□□□□ -2.15
HDGFL3-202ENST00000562702 TAL2Q16559 108 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms