RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 SUMF2Q8NBJ7 301 aa11.43□□□□□ -0.58
SPG7-205ENST00000561945 KLHL30-AS1Q8NEE0 82 aa11.43□□□□□ -0.58
SPG7-205ENST00000561945 RFESDQ8TAC1 157 aa11.43□□□□□ -0.58
SPG7-205ENST00000561945 TNFAIP8L1Q8WVP5 186 aa11.43□□□□□ -0.58
SPG7-205ENST00000561945 RAX2Q96IS3 184 aa11.43□□□□□ -0.58
SPG7-205ENST00000561945 NR1H4Q96RI1 486 aaPredicted RBP11.43□□□□□ -0.58
SPG7-205ENST00000561945 PDCD1LG2Q9BQ51 273 aa11.43□□□□□ -0.58
SPG7-205ENST00000561945 GON7Q9BXV9 100 aa11.43□□□□□ -0.58
SPG7-205ENST00000561945 PLSCR3Q9NRY6 295 aa11.43□□□□□ -0.58
SPG7-205ENST00000561945 AASSQ9UDR5 926 aa11.43□□□□□ -0.58
SPG7-205ENST00000561945 MAGEB3O15480 346 aa11.42□□□□□ -0.58
SPG7-205ENST00000561945 ORC5O43913 435 aa11.42□□□□□ -0.58
SPG7-205ENST00000561945 GPR12P47775 334 aa11.42□□□□□ -0.58
SPG7-205ENST00000561945 CDX1P47902 265 aaPredicted RBP11.42□□□□□ -0.58
SPG7-205ENST00000561945 GNG10P50151 68 aa11.42□□□□□ -0.58
SPG7-205ENST00000561945 ZNF137PP52743 207 aa11.42□□□□□ -0.58
SPG7-205ENST00000561945 RBM11P57052 281 aaKnown RBP11.42□□□□□ -0.58
SPG7-205ENST00000561945 DGCR2P98153 550 aa11.42□□□□□ -0.58
SPG7-205ENST00000561945 KIR2DS1Q14954 304 aa11.42□□□□□ -0.58
SPG7-205ENST00000561945 RSU1Q15404 277 aa11.42□□□□□ -0.58
SPG7-205ENST00000561945 PNLIPRP3Q17RR3 467 aa11.42□□□□□ -0.58
SPG7-205ENST00000561945 CCDC58Q4VC31 144 aa11.42□□□□□ -0.58
SPG7-205ENST00000561945 UNQ9370/PRO34162Q6UXP9 181 aa11.42□□□□□ -0.58
SPG7-205ENST00000561945 OR10X1Q8NGY0 326 aa11.42□□□□□ -0.58
SPG7-205ENST00000561945 Q96MT0 163 aa11.42□□□□□ -0.58
SPG7-205ENST00000561945 DCLRE1BQ9H816 532 aa11.42□□□□□ -0.58
SPG7-205ENST00000561945 ZNF581Q9P0T4 197 aa11.42□□□□□ -0.58
SPG7-205ENST00000561945 LINC00527Q9UJ94 153 aa11.42□□□□□ -0.58
SPG7-205ENST00000561945 ST3GAL6Q9Y274 331 aa11.42□□□□□ -0.58
SPG7-205ENST00000561945 GMPPBQ9Y5P6 360 aa11.42□□□□□ -0.58
SPG7-205ENST00000561945 NUDT19A8MXV4 375 aa11.41□□□□□ -0.58
SPG7-205ENST00000561945 CCL24O00175 119 aa11.41□□□□□ -0.58
SPG7-205ENST00000561945 LIMS3P0CW19 117 aa11.41□□□□□ -0.58
SPG7-205ENST00000561945 LIMS4P0CW20 117 aa11.41□□□□□ -0.58
SPG7-205ENST00000561945 CD1BP29016 333 aa11.41□□□□□ -0.58
SPG7-205ENST00000561945 GBX2P52951 348 aaPredicted RBP11.41□□□□□ -0.58
SPG7-205ENST00000561945 FOXE3Q13461 319 aa11.41□□□□□ -0.58
SPG7-205ENST00000561945 FHL3Q13643 280 aa11.41□□□□□ -0.58
SPG7-205ENST00000561945 HNF4GQ14541 408 aa11.41□□□□□ -0.58
SPG7-205ENST00000561945 MPV17LQ2QL34 196 aa11.41□□□□□ -0.58
SPG7-205ENST00000561945 ZIK1Q3SY52 487 aaPredicted RBP11.41□□□□□ -0.58
SPG7-205ENST00000561945 LPCAT4Q643R3 524 aa11.41□□□□□ -0.58
SPG7-205ENST00000561945 GAPTQ8N292 157 aa11.41□□□□□ -0.58
SPG7-205ENST00000561945 FAM71E2Q8N5Q1 922 aa11.41□□□□□ -0.58
SPG7-205ENST00000561945 OR8H1Q8NGG4 311 aa11.41□□□□□ -0.58
SPG7-205ENST00000561945 OR52I1Q8NGK6 324 aa11.41□□□□□ -0.58
SPG7-205ENST00000561945 OR10K1Q8NGX5 313 aa11.41□□□□□ -0.58
SPG7-205ENST00000561945 OR2T10Q8NGZ9 312 aa11.41□□□□□ -0.58
SPG7-205ENST00000561945 OR8U1Q8NH10 309 aa11.41□□□□□ -0.58
SPG7-205ENST00000561945 TSEN15Q8WW01 171 aaKnown RBP11.41□□□□□ -0.58
SPG7-205ENST00000561945 RTN4IP1Q8WWV3 396 aaPredicted RBP11.41□□□□□ -0.58
SPG7-205ENST00000561945 GPER1Q99527 375 aa11.41□□□□□ -0.58
SPG7-205ENST00000561945 S100A14Q9HCY8 104 aa11.41□□□□□ -0.58
SPG7-205ENST00000561945 FAM118AQ9NWS6 357 aa11.41□□□□□ -0.58
SPG7-205ENST00000561945 GFOD1Q9NXC2 390 aa11.41□□□□□ -0.58
SPG7-205ENST00000561945 TAS2R4Q9NYW5 299 aa11.41□□□□□ -0.58
SPG7-205ENST00000561945 STAB2Q8WWQ8 2551 aa11.4□□□□□ -0.58
SPG7-205ENST00000561945 DNAH1Q9P2D7 4330 aa11.4□□□□□ -0.58
SPG7-205ENST00000561945 A0A1W2PPE3 182 aa11.4□□□□□ -0.58
SPG7-205ENST00000561945 TMEM30CPA0ZSE6 113 aa11.4□□□□□ -0.58
SPG7-205ENST00000561945 GPX5O75715 221 aa11.4□□□□□ -0.58
SPG7-205ENST00000561945 IGHG4P01861 327 aa11.4□□□□□ -0.58
SPG7-205ENST00000561945 IGF1P05019 195 aa11.4□□□□□ -0.58
SPG7-205ENST00000561945 RPLP1P05386 114 aaKnown RBP11.4□□□□□ -0.58
SPG7-205ENST00000561945 ELANEP08246 267 aa11.4□□□□□ -0.58
SPG7-205ENST00000561945 VHLP40337 213 aa11.4□□□□□ -0.58
SPG7-205ENST00000561945 GTF2A1P52655 376 aaPredicted RBP11.4□□□□□ -0.58
SPG7-205ENST00000561945 GABPB1Q06547 395 aaPredicted RBP11.4□□□□□ -0.58
SPG7-205ENST00000561945 LTC4SQ16873 150 aa11.4□□□□□ -0.58
SPG7-205ENST00000561945 TMEM30BQ3MIR4 351 aa11.4□□□□□ -0.58
SPG7-205ENST00000561945 RPL22L1Q6P5R6 122 aaKnown RBP11.4□□□□□ -0.58
SPG7-205ENST00000561945 ZNF497Q6ZNH5 498 aa11.4□□□□□ -0.58
SPG7-205ENST00000561945 CBR4Q8N4T8 237 aa11.4□□□□□ -0.58
SPG7-205ENST00000561945 ZNF439Q8NDP4 499 aa11.4□□□□□ -0.58
SPG7-205ENST00000561945 OR52N1Q8NH53 320 aa11.4□□□□□ -0.58
SPG7-205ENST00000561945 MYOZ3Q8TDC0 251 aa11.4□□□□□ -0.58
SPG7-205ENST00000561945 GPR148Q8TDV2 347 aa11.4□□□□□ -0.58
SPG7-205ENST00000561945 APH1BQ8WW43 257 aa11.4□□□□□ -0.58
SPG7-205ENST00000561945 METTL9Q9H1A3 318 aa11.4□□□□□ -0.58
SPG7-205ENST00000561945 FGF20Q9NP95 211 aaPredicted RBP11.4□□□□□ -0.58
SPG7-205ENST00000561945 TMEM138Q9NPI0 162 aa11.4□□□□□ -0.58
SPG7-205ENST00000561945 RCC2Q9P258 522 aaKnown RBP11.4□□□□□ -0.58
SPG7-205ENST00000561945 BIRC6Q9NR09 4857 aa11.4□□□□□ -0.59
SPG7-205ENST00000561945 TRAV39A0A0B4J263 110 aa11.39□□□□□ -0.59
SPG7-205ENST00000561945 SDCBPO00560 298 aaPredicted RBP11.39□□□□□ -0.59
SPG7-205ENST00000561945 GEMIN2O14893 280 aaKnown RBP11.39□□□□□ -0.59
SPG7-205ENST00000561945 TXNL1O43396 289 aa11.39□□□□□ -0.59
SPG7-205ENST00000561945 ZNF780AO75290 641 aaPredicted RBP11.39□□□□□ -0.59
SPG7-205ENST00000561945 OR7C1O76099 320 aaPredicted RBP11.39□□□□□ -0.59
SPG7-205ENST00000561945 CDRT1O95170 752 aa11.39□□□□□ -0.59
SPG7-205ENST00000561945 HTR3BO95264 441 aa11.39□□□□□ -0.59
SPG7-205ENST00000561945 MOSP00540 346 aa11.39□□□□□ -0.59
SPG7-205ENST00000561945 MT-ND4P03905 459 aa11.39□□□□□ -0.59
SPG7-205ENST00000561945 CD2P06729 351 aa11.39□□□□□ -0.59
SPG7-205ENST00000561945 IGFBP3P17936 291 aaPredicted RBP11.39□□□□□ -0.59
SPG7-205ENST00000561945 PSMB8P28062 276 aa11.39□□□□□ -0.59
SPG7-205ENST00000561945 ZNF93P35789 620 aaPredicted RBP11.39□□□□□ -0.59
SPG7-205ENST00000561945 GPR50Q13585 617 aa11.39□□□□□ -0.59
SPG7-205ENST00000561945 NKAPLQ5M9Q1 402 aa11.39□□□□□ -0.59
SPG7-205ENST00000561945 XAF1Q6GPH4 301 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms