RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 TMEM30CPA0ZSE6 113 aa8.19□□□□□ -1.1
CLK3-205ENST00000561673 ZNF780AO75290 641 aaPredicted RBP8.19□□□□□ -1.1
CLK3-205ENST00000561673 GTF2F2P13984 249 aa8.19□□□□□ -1.1
CLK3-205ENST00000561673 GZMHP20718 246 aa8.19□□□□□ -1.1
CLK3-205ENST00000561673 GNG10P50151 68 aa8.19□□□□□ -1.1
CLK3-205ENST00000561673 MADCAM1Q13477 382 aa8.19□□□□□ -1.1
CLK3-205ENST00000561673 DOC2BQ14184 412 aa8.19□□□□□ -1.1
CLK3-205ENST00000561673 MPV17LQ2QL34 196 aa8.19□□□□□ -1.1
CLK3-205ENST00000561673 ATAD3CQ5T2N8 411 aa8.19□□□□□ -1.1
CLK3-205ENST00000561673 KPRPQ5T749 579 aaPredicted RBP8.19□□□□□ -1.1
CLK3-205ENST00000561673 OGFRL1Q5TC84 451 aaPredicted RBP8.19□□□□□ -1.1
CLK3-205ENST00000561673 SLC16A12Q6ZSM3 486 aa8.19□□□□□ -1.1
CLK3-205ENST00000561673 THNSL2Q86YJ6 484 aa8.19□□□□□ -1.1
CLK3-205ENST00000561673 C8orf59Q8N0T1 100 aaPredicted RBP8.19□□□□□ -1.1
CLK3-205ENST00000561673 DRAM1Q8N682 238 aa8.19□□□□□ -1.1
CLK3-205ENST00000561673 OR4F17Q8NGA8 305 aa8.19□□□□□ -1.1
CLK3-205ENST00000561673 OR10A7Q8NGE5 316 aa8.19□□□□□ -1.1
CLK3-205ENST00000561673 OR56B4Q8NH76 319 aa8.19□□□□□ -1.1
CLK3-205ENST00000561673 FBLIM1Q8WUP2 373 aa8.19□□□□□ -1.1
CLK3-205ENST00000561673 CCDC107Q8WV48 283 aa8.19□□□□□ -1.1
CLK3-205ENST00000561673 TOMM40LQ969M1 308 aa8.19□□□□□ -1.1
CLK3-205ENST00000561673 OR4F4Q96R69 305 aa8.19□□□□□ -1.1
CLK3-205ENST00000561673 PCDHB16Q9NRJ7 776 aa8.19□□□□□ -1.1
CLK3-205ENST00000561673 CNOT2Q9NZN8 540 aaKnown RBP8.19□□□□□ -1.1
CLK3-205ENST00000561673 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.19□□□□□ -1.1
CLK3-205ENST00000561673 AMMECR1Q9Y4X0 333 aaPredicted RBP8.19□□□□□ -1.1
CLK3-205ENST00000561673 A0A1W2PPI3 338 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 C15orf65H3BRN8 121 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 M0QZK8 103 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 CASQ2O14958 399 aaPredicted RBP8.18□□□□□ -1.1
CLK3-205ENST00000561673 PIN1P1O15428 100 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 PRB2P02812 416 aaPredicted RBP8.18□□□□□ -1.1
CLK3-205ENST00000561673 MT-ND4P03905 459 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 MAS1P04201 325 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 SNRNP70P08621 437 aaKnown RBP8.18□□□□□ -1.1
CLK3-205ENST00000561673 CELP19835 753 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 FSTP19883 344 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 RAB7AP51149 207 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 TAS2R43P59537 309 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 GPR176Q14439 515 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 C9orf152Q5JTZ5 239 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 FAM53AQ6NSI3 398 aaPredicted RBP8.18□□□□□ -1.1
CLK3-205ENST00000561673 C10orf99Q6UWK7 81 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 GLIPR1L1Q6UWM5 242 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 ZNF497Q6ZNH5 498 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 AHSA2Q719I0 299 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 STX19Q8N4C7 294 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 JAGN1Q8N5M9 183 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 NANOGP1Q8N7R0 232 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 BPIFB6Q8NFQ5 453 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 OR10X1Q8NGY0 326 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 UBALD1Q8TB05 177 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 ARL11Q969Q4 196 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 MUL1Q969V5 352 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 DERL3Q96Q80 235 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 PLCXD1Q9NUJ7 323 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 MRPS28Q9Y2Q9 187 aaKnown RBP8.18□□□□□ -1.1
CLK3-205ENST00000561673 MOB4Q9Y3A3 225 aa8.18□□□□□ -1.1
CLK3-205ENST00000561673 TCRBV4S1A1TA0A5B7 111 aa8.17□□□□□ -1.1
CLK3-205ENST00000561673 ANKRD65E5RJM6 399 aa8.17□□□□□ -1.1
CLK3-205ENST00000561673 CD1AP06126 327 aa8.17□□□□□ -1.1
CLK3-205ENST00000561673 WNT4P56705 351 aa8.17□□□□□ -1.1
CLK3-205ENST00000561673 LOXL3P58215 753 aa8.17□□□□□ -1.1
CLK3-205ENST00000561673 HES1Q14469 280 aa8.17□□□□□ -1.1
CLK3-205ENST00000561673 HNF4GQ14541 408 aa8.17□□□□□ -1.1
CLK3-205ENST00000561673 AWAT2Q6E213 333 aa8.17□□□□□ -1.1
CLK3-205ENST00000561673 LYPD6Q86Y78 171 aa8.17□□□□□ -1.1
CLK3-205ENST00000561673 CDH26Q8IXH8 852 aa8.17□□□□□ -1.1
CLK3-205ENST00000561673 OR8H3Q8N146 312 aa8.17□□□□□ -1.1
CLK3-205ENST00000561673 OR52M1Q8NGK5 317 aa8.17□□□□□ -1.1
CLK3-205ENST00000561673 TFAP2CQ92754 450 aa8.17□□□□□ -1.1
CLK3-205ENST00000561673 MYDGFQ969H8 173 aa8.17□□□□□ -1.1
CLK3-205ENST00000561673 MRPS24Q96EL2 167 aaKnown RBP8.17□□□□□ -1.1
CLK3-205ENST00000561673 BANF2Q9H503 90 aa8.17□□□□□ -1.1
CLK3-205ENST00000561673 FKBP14Q9NWM8 211 aa8.17□□□□□ -1.1
CLK3-205ENST00000561673 RCC2Q9P258 522 aaKnown RBP8.17□□□□□ -1.1
CLK3-205ENST00000561673 TSSC4Q9Y5U2 329 aaPredicted RBP8.17□□□□□ -1.1
CLK3-205ENST00000561673 IGHV3-43A0A0B4J1X8 118 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 MCRIP1C9JLW8 97 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 AIPO00170 330 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 CCRL2O00421 344 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 SDCBPO00560 298 aaPredicted RBP8.16□□□□□ -1.1
CLK3-205ENST00000561673 MYL12BO14950 172 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 ORC5O43913 435 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 IGKV1D-33P01593 117 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 IGKV1-33P01594 117 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 IGHV3-43DP0DP04 118 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 TMEM11P17152 192 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 VHLP40337 213 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 REG1BP48304 166 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 INSL4Q14641 139 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 SYT6Q5T7P8 510 aaPredicted RBP8.16□□□□□ -1.1
CLK3-205ENST00000561673 RAB12Q6IQ22 244 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 LINC00311Q8N616 119 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 C5orf56Q8N8D9 126 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 TMEM104Q8NE00 496 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 WFDC9Q8NEX5 89 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 NEK7Q8TDX7 302 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 CYYR1Q96J86 154 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 SELENOIQ9C0D9 397 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms