RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 HOXA4Q00056 320 aaPredicted RBP8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 VMA21Q3ZAQ7 101 aa8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 R3HDM4Q96D70 268 aa8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 PCGF1Q9BSM1 259 aa8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 CBLN4Q9NTU7 201 aa8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 SCN1AP35498 2009 aa8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 PITX3O75364 302 aa8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 FAM3BP58499 235 aaPredicted RBP8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 EIF3IQ13347 325 aaKnown RBP8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 SPATA45Q537H7 98 aa8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 ZNF766Q5HY98 468 aa8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 ZNF343Q6P1L6 599 aa8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 RAB24Q969Q5 203 aa8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 DOCK2Q92608 1830 aa8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 LYZP61626 148 aa8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 NAAAQ02083 359 aa8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 GGTLC2Q14390 218 aa8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 ANKRD37Q7Z713 158 aa8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 SFTPA1Q8IWL2 248 aa8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 FLYWCH2Q96CP2 140 aaKnown RBP8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 ALX4Q9H161 411 aaPredicted RBP8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 KCNK7Q9Y2U2 307 aa8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 ALS2Q96Q42 1657 aa8.96□□□□□ -0.98
GTF3C1-202ENST00000561623 C5orf52A6NGY3 159 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 UQCRFS1P47985 274 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 KHDC3LQ587J8 217 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 CLEC2AQ6UVW9 174 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 ANKRD33Q7Z3H0 272 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 BPIFA4PQ86YQ2 179 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 OR13G1Q8NGZ3 307 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 H3BVH4 76 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 PDE6DO43924 150 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 BCL2P10415 239 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 SLC35E4Q6ICL7 350 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 OR1P1Q8NH06 330 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 SGMS2Q8NHU3 365 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 IFITM10A6NMD0 228 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 DEDDO75618 318 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 CYB5R3P00387 301 aaPredicted RBP8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 PSMB2P49721 201 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 SDHCQ99643 169 aaPredicted RBP8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 SSX8Q7RTT4 187 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 PDPNQ86YL7 162 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 RSG1Q9BU20 258 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 GGACTQ9BVM4 153 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 DDA1Q9BW61 102 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 YAE1D1Q9NRH1 226 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 TMEM167BQ9NRX6 74 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 P4HTMQ9NXG6 502 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 TNRC6CQ9HCJ0 1690 aaKnown RBP8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 HELTA6NFD8 242 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 HOXA6P31267 233 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 TUSC5Q8IXB3 177 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 WDR31Q8NA23 367 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 ABHD3Q8WU67 409 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 VSTM2LQ96N03 204 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 NHSQ6T4R5 1651 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 A6NDN8 102 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 RHBDL1O75783 438 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 COMPP49747 757 aaPredicted RBP8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 ZNF600Q6ZNG1 722 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 HOGA1Q86XE5 327 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 KISS1RQ969F8 398 aaPredicted RBP8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 SLC25A38Q96DW6 304 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 GPX7Q96SL4 187 aaPredicted RBP8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 ARAP2Q8WZ64 1704 aa8.95□□□□□ -0.98
GTF3C1-202ENST00000561623 GCM2O75603 506 aaPredicted RBP8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 HKR1P10072 659 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 PMELP40967 661 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 OR4C12Q96R67 309 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 RAB1BQ9H0U4 201 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 OR6C3Q9NZP0 311 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 CLN8Q9UBY8 286 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 TRIOBPQ9H2D6 2365 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 LILRA5A6NI73 299 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 PTP4A3O75365 173 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 OR10D3Q8NH80 312 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 LRRC29Q8WV35 223 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 HIST1H2BAQ96A08 127 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 DMRT1Q9Y5R6 373 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 KNTC1P50748 2209 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 P01737 135 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 CISD3P0C7P0 127 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 MUC15Q8N387 334 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 TMEM116Q8NCL8 245 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 IL36GQ9NZH8 169 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 UFC1Q9Y3C8 167 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 A0A1W2PPC1 479 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 C3orf80F5H4A9 247 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 PF4P02776 101 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 FDX2Q6P4F2 183 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 ZNF738Q8NE65 137 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 OR6X1Q8NH79 312 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 PGLYRP3Q96LB9 341 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 MYO7AQ13402 2215 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 CTXND1A0A1B0GTU2 59 aa8.94□□□□□ -0.98
GTF3C1-202ENST00000561623 F5H697 171 aa8.93□□□□□ -0.98
GTF3C1-202ENST00000561623 CDS2O95674 445 aa8.93□□□□□ -0.98
GTF3C1-202ENST00000561623 GLULP15104 373 aa8.93□□□□□ -0.98
GTF3C1-202ENST00000561623 COX14Q96I36 57 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms