RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 REG1BP48304 166 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 GNG10P50151 68 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 BCAP31P51572 246 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 F2RL1P55085 397 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 SYNJ2BPP57105 145 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 FXYD6P3P58550 94 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 NANOS2P60321 138 aaKnown RBP3.96□□□□□ -1.78
HERC1-213ENST00000561359 B2MP61769 119 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 RBMS2Q15434 407 aaKnown RBP3.96□□□□□ -1.78
HERC1-213ENST00000561359 GUCA2BQ16661 112 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 ZNF684Q5T5D7 378 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 IL34Q6ZMJ4 242 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 SLC51BQ86UW2 128 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 COMMD2Q86X83 199 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.96□□□□□ -1.78
HERC1-213ENST00000561359 FUNDC1Q8IVP5 155 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 IZUMO1Q8IYV9 350 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 Q8N6K4 173 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 FAM86B1Q8N7N1 296 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 LINC00469Q8N7U9 141 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 OR9G4Q8NGQ1 327 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 OR2T4Q8NH00 348 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 FANK1Q8TC84 345 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 LEAP2Q969E1 77 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 C18orf15Q96N68 181 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 OR52B2Q96RD2 323 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 ZNF184Q99676 751 aaPredicted RBP3.96□□□□□ -1.78
HERC1-213ENST00000561359 UQCC2Q9BRT2 126 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 CENPOQ9BU64 300 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 IFT27Q9BW83 186 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 BARHL1Q9BZE3 327 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 KAT8Q9H7Z6 458 aaKnown RBP3.96□□□□□ -1.78
HERC1-213ENST00000561359 GPR173Q9NS66 373 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 ARMC1Q9NVT9 282 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 THAP1Q9NVV9 213 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 GID8Q9NWU2 228 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 SLC23A1Q9UHI7 598 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 ENPP5Q9UJA9 477 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 SNX13Q9Y5W8 968 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 U3KQV3 271 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 DSCAML1Q8TD84 2053 aa3.96□□□□□ -1.78
HERC1-213ENST00000561359 A0A087X0M5 115 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 LOC102724200A0A096LPH7 203 aaPredicted RBP3.95□□□□□ -1.78
HERC1-213ENST00000561359 A0A1B0GX30 115 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 FUOMA2VDF0 154 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 F8VVB4 439 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 F8VWA3 439 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 FFAR1O14842 300 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 ARPC3O15145 178 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 SLC22A1O15245 554 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 SPDEFO95238 335 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 GAPDHP04406 335 aaKnown RBP3.95□□□□□ -1.78
HERC1-213ENST00000561359 H2BFMP0C1H6 154 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 CTRB1P17538 263 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 DUSP1P28562 367 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 ERP29P30040 261 aaKnown RBP3.95□□□□□ -1.78
HERC1-213ENST00000561359 SLC6A6P31641 620 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 OR3A1P47881 315 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 GLIPR1P48060 266 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 GSSP48637 474 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 ERVK11-1P61568 191 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 BLOC1S1P78537 153 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 RIPPLY1Q0D2K3 151 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 APOFQ13790 326 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 KLF5Q13887 457 aaPredicted RBP3.95□□□□□ -1.78
HERC1-213ENST00000561359 ECSCRQ19T08 205 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 DEFB135Q30KP9 77 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 AGKQ53H12 422 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 CYBRD1Q53TN4 286 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 SOHLH1Q5JUK2 328 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 LCN1P1Q5VSP4 162 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 CTRB2Q6GPI1 263 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 ZNF529Q6P280 563 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 ANGPTL5Q86XS5 388 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 ERI1Q8IV48 349 aaKnown RBP3.95□□□□□ -1.78
HERC1-213ENST00000561359 LAX1Q8IWV1 398 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 MINDY2Q8NBR6 621 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 OR8H1Q8NGG4 311 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 OR8B12Q8NGG6 310 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 RNF133Q8WVZ7 376 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 CORO2AQ92828 525 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 CEP19Q96LK0 163 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 NEU1Q99519 415 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 ELAC2Q9BQ52 826 aaKnown RBP3.95□□□□□ -1.78
HERC1-213ENST00000561359 AIFM2Q9BRQ8 373 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 TMEM109Q9BVC6 243 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 MFFQ9GZY8 342 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 RBM38Q9H0Z9 239 aaKnown RBP3.95□□□□□ -1.78
HERC1-213ENST00000561359 RANGRFQ9HD47 186 aaPredicted RBP3.95□□□□□ -1.78
HERC1-213ENST00000561359 SAR1AQ9NR31 198 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 ZNF355PQ9NSJ1 428 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 APLNQ9ULZ1 77 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 PSG11Q9UQ72 335 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 ERGIC3Q9Y282 383 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 TP53TG1Q9Y2A0 90 aa3.95□□□□□ -1.78
HERC1-213ENST00000561359 LINC00854A0A1B0GVQ3 168 aa3.94□□□□□ -1.78
HERC1-213ENST00000561359 A0A1W2PPE3 182 aa3.94□□□□□ -1.78
HERC1-213ENST00000561359 PQLC2LA1A4F0 135 aa3.94□□□□□ -1.78
HERC1-213ENST00000561359 ODAMA1E959 279 aa3.94□□□□□ -1.78
HERC1-213ENST00000561359 ZNF729A6NN14 1252 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms