RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 C6orf201Q7Z4U5 140 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 TMEM86BQ8N661 226 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 OR11H6Q8NGC7 330 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 OR10V1Q8NGI7 309 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 OR10X1Q8NGY0 326 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 OR4F5Q8NH21 305 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 ZNF596Q8TC21 504 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 FCGR1BQ92637 280 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 MALSU1Q96EH3 234 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 KIRREL1Q96J84 757 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 Q96M66 194 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 GFI1Q99684 422 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 URM1Q9BTM9 101 aaKnown RBP8.2□□□□□ -1.1
HERC1-212ENST00000561348 FAAP24Q9BTP7 215 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 PRDM13Q9H4Q3 707 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 BEX1Q9HBH7 125 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 VCX3AQ9NNX9 186 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 PLEKHJ1Q9NW61 149 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 KCNIP1Q9NZI2 227 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 C1RLQ9NZP8 487 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 GNG12Q9UBI6 72 aa8.2□□□□□ -1.1
HERC1-212ENST00000561348 TBL2Q9Y4P3 447 aaKnown RBP8.2□□□□□ -1.1
HERC1-212ENST00000561348 A0A0B4J203 849 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 TRDV1A0A1B0GX56 115 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 ODF3BA8MYP8 253 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 LEUTXA8MZ59 168 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 SLC17A2O00624 439 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 SLC22A1O15245 554 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 SPINT2O43291 252 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 PDCD6O75340 191 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 IL1AP01583 271 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 MT-ND4P03905 459 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 RCC1P18754 421 aaPredicted RBP8.19□□□□□ -1.1
HERC1-212ENST00000561348 RAB3BP20337 219 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 GZMHP20718 246 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 CEACAM3P40198 252 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 VEGFCP49767 419 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 PSMD7P51665 324 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 RPS27AP62979 156 aaKnown RBP8.19□□□□□ -1.1
HERC1-212ENST00000561348 UNC119Q13432 240 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 C2orf76Q3KRA6 126 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 LDLRAD2Q5SZI1 272 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 FAM53AQ6NSI3 398 aaPredicted RBP8.19□□□□□ -1.1
HERC1-212ENST00000561348 ZNF497Q6ZNH5 498 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 C5orf24Q7Z6I8 188 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 RTN4RL2Q86UN3 420 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 OR9G1Q8NH87 305 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 CAPSLQ8WWF8 208 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 RPEQ96AT9 228 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 FAM3DQ96BQ1 224 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 AJUBAQ96IF1 538 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 SULT4A1Q9BR01 284 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 OR51E2Q9H255 320 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 DPM3Q9P2X0 92 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 STUB1Q9UNE7 303 aa8.19□□□□□ -1.1
HERC1-212ENST00000561348 H3BUI4 141 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 SOCS1O15524 211 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 SLC2A2P11168 524 aaPredicted RBP8.18□□□□□ -1.1
HERC1-212ENST00000561348 CD36P16671 472 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 GADD45AP24522 165 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 MNDAP41218 407 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 REG1BP48304 166 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 ARHGDIBP52566 201 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 RELBQ01201 579 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 SRSF4Q08170 494 aaKnown RBP8.18□□□□□ -1.1
HERC1-212ENST00000561348 HES1Q14469 280 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 KCTD21Q4G0X4 260 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 C6orf183Q5T699 404 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 MINOS1Q5TGZ0 78 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 SIGIRRQ6IA17 410 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 LYPD6Q86Y78 171 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 TSPAN14Q8NG11 270 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 OR4P4Q8NGL7 312 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 OR1L1Q8NH94 360 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 IL1F10Q8WWZ1 152 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 TOMM40LQ969M1 308 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 MEGF9Q9H1U4 602 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 IFT22Q9H7X7 185 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 TXNL4BQ9NX01 149 aaKnown RBP8.18□□□□□ -1.1
HERC1-212ENST00000561348 STEAP1Q9UHE8 339 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 PSG11Q9UQ72 335 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 SIGLEC9Q9Y336 463 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 AMMECR1Q9Y4X0 333 aaPredicted RBP8.18□□□□□ -1.1
HERC1-212ENST00000561348 RNF114Q9Y508 228 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 MINOS1-NBL1R4GNA1 71 aa8.18□□□□□ -1.1
HERC1-212ENST00000561348 A0A087WXM4 84 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 TMEM272A0A1B0GTI8 110 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 SHISA3A0PJX4 238 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 FAM90A10PA6NDY2 464 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 FAM90A18PA6NE21 464 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 FAM90A16PA6NEW6 464 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 FAM90A20PA6NIJ5 464 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 FAM90A8PA6NJQ4 464 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 FAM90A7PA6NKC0 464 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 FAM90A22PA8MWA6 464 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 TMEM14DPA8MWL7 114 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 FAM90A12PA8MX19 464 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 FAM90A5PA8MXJ8 464 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 FAM90A23PA8MXZ1 464 aa8.17□□□□□ -1.1
HERC1-212ENST00000561348 C12orf77C9JDV5 145 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms