RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 AWAT1Q58HT5 328 aa11.23□□□□□ -0.61
TPM1-230ENST00000561266 CCBE1Q6UXH8 406 aaPredicted RBP11.23□□□□□ -0.61
TPM1-230ENST00000561266 C6orf201Q7Z4U5 140 aa11.23□□□□□ -0.61
TPM1-230ENST00000561266 GAPTQ8N292 157 aa11.23□□□□□ -0.61
TPM1-230ENST00000561266 GCDHQ92947 438 aaPredicted RBP11.23□□□□□ -0.61
TPM1-230ENST00000561266 FAAP24Q9BTP7 215 aa11.23□□□□□ -0.61
TPM1-230ENST00000561266 TM2D1Q9BX74 207 aa11.23□□□□□ -0.61
TPM1-230ENST00000561266 CLEC7AQ9BXN2 247 aa11.23□□□□□ -0.61
TPM1-230ENST00000561266 TMEM59Q9BXS4 323 aa11.23□□□□□ -0.61
TPM1-230ENST00000561266 GAL3ST2Q9H3Q3 398 aa11.23□□□□□ -0.61
TPM1-230ENST00000561266 ZMAT3Q9HA38 289 aaKnown RBP11.23□□□□□ -0.61
TPM1-230ENST00000561266 PLGRKTQ9HBL7 147 aa11.23□□□□□ -0.61
TPM1-230ENST00000561266 IDI2-AS1Q9NZ38 188 aa11.23□□□□□ -0.61
TPM1-230ENST00000561266 A0A087X0M5 115 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 TMEM272A0A1B0GTI8 110 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 A0A1B0GX30 115 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 TMEM30CPA0ZSE6 113 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 FOXI3A8MTJ6 420 aaPredicted RBP11.22□□□□□ -0.61
TPM1-230ENST00000561266 MCRIP1C9JLW8 97 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 PDCD6O75340 191 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 BPNT1O95861 308 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 PAHP00439 452 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 IL1AP01583 271 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 CLEC2LP0C7M8 214 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 SLC2A2P11168 524 aaPredicted RBP11.22□□□□□ -0.61
TPM1-230ENST00000561266 RCC1P18754 421 aaPredicted RBP11.22□□□□□ -0.61
TPM1-230ENST00000561266 MDKP21741 143 aaPredicted RBP11.22□□□□□ -0.61
TPM1-230ENST00000561266 NFYBP25208 207 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 FGF9P31371 208 aaPredicted RBP11.22□□□□□ -0.61
TPM1-230ENST00000561266 TGFBR1P36897 503 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 TMEM50BP56557 158 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 RAB11BQ15907 218 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 SSX2Q16385 188 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 LY6EQ16553 131 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 NKAPLQ5M9Q1 402 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 ZNF565Q8N9K5 539 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 NEK7Q8TDX7 302 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 FAM3DQ96BQ1 224 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 CST11Q9H112 138 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 ETAA1Q9NY74 926 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 STUB1Q9UNE7 303 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 HILPDAQ9Y5L2 63 aa11.22□□□□□ -0.61
TPM1-230ENST00000561266 IGHV3-43A0A0B4J1X8 118 aa11.21□□□□□ -0.61
TPM1-230ENST00000561266 A0A1W2PPE3 182 aa11.21□□□□□ -0.61
TPM1-230ENST00000561266 TRIM64CA6NLI5 447 aa11.21□□□□□ -0.61
TPM1-230ENST00000561266 LY6LH3BQJ8 138 aa11.21□□□□□ -0.61
TPM1-230ENST00000561266 AIPO00170 330 aa11.21□□□□□ -0.61
TPM1-230ENST00000561266 IGHV3-43DP0DP04 118 aa11.21□□□□□ -0.61
TPM1-230ENST00000561266 ARSBP15848 533 aa11.21□□□□□ -0.61
TPM1-230ENST00000561266 GALP22466 123 aa11.21□□□□□ -0.61
TPM1-230ENST00000561266 LGALS4P56470 323 aa11.21□□□□□ -0.61
TPM1-230ENST00000561266 DIAPH2-AS1Q14236 149 aa11.21□□□□□ -0.61
TPM1-230ENST00000561266 LRRC75BQ2VPJ9 315 aa11.21□□□□□ -0.61
TPM1-230ENST00000561266 OLFML2AQ68BL7 652 aa11.21□□□□□ -0.61
TPM1-230ENST00000561266 FAM89BQ8N5H3 189 aa11.21□□□□□ -0.61
TPM1-230ENST00000561266 TSPAN14Q8NG11 270 aa11.21□□□□□ -0.61
TPM1-230ENST00000561266 KCNG3Q8TAE7 436 aa11.21□□□□□ -0.61
TPM1-230ENST00000561266 MRPL30Q8TCC3 161 aaKnown RBP11.21□□□□□ -0.61
TPM1-230ENST00000561266 MALSU1Q96EH3 234 aa11.21□□□□□ -0.61
TPM1-230ENST00000561266 CHCHD6Q9BRQ6 235 aa11.21□□□□□ -0.61
TPM1-230ENST00000561266 HDHD3Q9BSH5 251 aaPredicted RBP11.21□□□□□ -0.61
TPM1-230ENST00000561266 ZNF696Q9H7X3 374 aa11.21□□□□□ -0.61
TPM1-230ENST00000561266 FBLN5Q9UBX5 448 aa11.21□□□□□ -0.61
TPM1-230ENST00000561266 STEAP1Q9UHE8 339 aa11.21□□□□□ -0.61
TPM1-230ENST00000561266 TBL2Q9Y4P3 447 aaKnown RBP11.21□□□□□ -0.61
TPM1-230ENST00000561266 IFITM5A6NNB3 132 aa11.2□□□□□ -0.62
TPM1-230ENST00000561266 C12orf77C9JDV5 145 aa11.2□□□□□ -0.62
TPM1-230ENST00000561266 CHST1O43916 411 aa11.2□□□□□ -0.62
TPM1-230ENST00000561266 CD36P16671 472 aa11.2□□□□□ -0.62
TPM1-230ENST00000561266 RAB3BP20337 219 aa11.2□□□□□ -0.62
TPM1-230ENST00000561266 BLVRBP30043 206 aaPredicted RBP11.2□□□□□ -0.62
TPM1-230ENST00000561266 LOXL3P58215 753 aa11.2□□□□□ -0.62
TPM1-230ENST00000561266 FAM189A2Q15884 450 aa11.2□□□□□ -0.62
TPM1-230ENST00000561266 HLA-DRB5Q30154 266 aa11.2□□□□□ -0.62
TPM1-230ENST00000561266 MOGAT2Q3SYC2 334 aa11.2□□□□□ -0.62
TPM1-230ENST00000561266 OR52W1Q6IF63 320 aa11.2□□□□□ -0.62
TPM1-230ENST00000561266 C12orf54Q6X4T0 127 aa11.2□□□□□ -0.62
TPM1-230ENST00000561266 OR2W3Q7Z3T1 314 aa11.2□□□□□ -0.62
TPM1-230ENST00000561266 OR1L1Q8NH94 360 aa11.2□□□□□ -0.62
TPM1-230ENST00000561266 ARL11Q969Q4 196 aa11.2□□□□□ -0.62
TPM1-230ENST00000561266 RBMXL1Q96E39 390 aaKnown RBP11.2□□□□□ -0.62
TPM1-230ENST00000561266 YIPF6Q96EC8 236 aa11.2□□□□□ -0.62
TPM1-230ENST00000561266 CENPOQ9BU64 300 aa11.2□□□□□ -0.62
TPM1-230ENST00000561266 DPAGT1Q9H3H5 408 aa11.2□□□□□ -0.62
TPM1-230ENST00000561266 SPACA1Q9HBV2 294 aa11.2□□□□□ -0.62
TPM1-230ENST00000561266 VPREB3Q9UKI3 123 aa11.2□□□□□ -0.62
TPM1-230ENST00000561266 PSG11Q9UQ72 335 aa11.2□□□□□ -0.62
TPM1-230ENST00000561266 VGLL3A8MV65 326 aa11.19□□□□□ -0.62
TPM1-230ENST00000561266 BUB1B-PAK6H3BSN5 160 aa11.19□□□□□ -0.62
TPM1-230ENST00000561266 SLC31A2O15432 143 aa11.19□□□□□ -0.62
TPM1-230ENST00000561266 TNFAIP8O95379 198 aa11.19□□□□□ -0.62
TPM1-230ENST00000561266 GLAP06280 429 aa11.19□□□□□ -0.62
TPM1-230ENST00000561266 SMIM18P0DKX4 95 aa11.19□□□□□ -0.62
TPM1-230ENST00000561266 MYL9P24844 172 aa11.19□□□□□ -0.62
TPM1-230ENST00000561266 CD24P25063 80 aa11.19□□□□□ -0.62
TPM1-230ENST00000561266 CFPP27918 469 aa11.19□□□□□ -0.62
TPM1-230ENST00000561266 VEGFCP49767 419 aa11.19□□□□□ -0.62
TPM1-230ENST00000561266 GNG10P50151 68 aa11.19□□□□□ -0.62
TPM1-230ENST00000561266 KRTAP10-3P60369 221 aa11.19□□□□□ -0.62
TPM1-230ENST00000561266 SRSF4Q08170 494 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms