RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 CHAC2Q8WUX2 184 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 CORO2AQ92828 525 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 Q96M66 194 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 ZNF714Q96N38 554 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 TBX15Q96SF7 602 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 NKX3-1Q99801 234 aaPredicted RBP11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 SUCNR1Q9BXA5 334 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 MS4A7Q9GZW8 240 aaPredicted RBP11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 GAL3ST2Q9H3Q3 398 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 KCNK15Q9H427 330 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 TAS2R3Q9NYW6 316 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 OR6C3Q9NZP0 311 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 FBLN5Q9UBX5 448 aa11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 MRPS7Q9Y2R9 242 aaKnown RBP11.5□□□□□ -0.57
PKNOX1-209ENST00000560448 ZFHX3Q15911 3703 aa11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 TRGV10A0A0A0MS01 117 aa11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 C17orf98A8MV24 154 aa11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 GEMIN2O14893 280 aaKnown RBP11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 XRCC3O43542 346 aa11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 CRTAPO75718 401 aaPredicted RBP11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 CD3GP09693 182 aa11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 ZNF728P0DKX0 622 aa11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 ARSBP15848 533 aa11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 TAS2R20P59543 309 aa11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 ERVFRD-1P60508 538 aa11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 TUSC1Q2TAM9 212 aa11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 KLF17Q5JT82 389 aaPredicted RBP11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 ZNF57Q68EA5 555 aaPredicted RBP11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 MZT2BQ6NZ67 158 aa11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 VMO1Q7Z5L0 202 aa11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 ZNF554Q86TJ5 538 aa11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 ZNF565Q8N9K5 539 aa11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 PTX4Q96A99 478 aa11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 URM1Q9BTM9 101 aaKnown RBP11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 TMEM59Q9BXS4 323 aa11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 CHST6Q9GZX3 395 aa11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 PPA2Q9H2U2 334 aa11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 HEXA-AS1Q9H8Q6 139 aa11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 RCC2Q9P258 522 aaKnown RBP11.49□□□□□ -0.57
PKNOX1-209ENST00000560448 TRAV24A0A0B4J272 114 aa11.48□□□□□ -0.57
PKNOX1-209ENST00000560448 GABARAPH6UMI1 98 aa11.48□□□□□ -0.57
PKNOX1-209ENST00000560448 TCF21O43680 179 aa11.48□□□□□ -0.57
PKNOX1-209ENST00000560448 INPP1P49441 399 aa11.48□□□□□ -0.57
PKNOX1-209ENST00000560448 UBE2E1P51965 193 aa11.48□□□□□ -0.57
PKNOX1-209ENST00000560448 MRPS10P82664 201 aaKnown RBP11.48□□□□□ -0.57
PKNOX1-209ENST00000560448 QRFPP83859 136 aa11.48□□□□□ -0.57
PKNOX1-209ENST00000560448 KLF9Q13886 244 aaPredicted RBP11.48□□□□□ -0.57
PKNOX1-209ENST00000560448 EDDM3AQ14507 147 aa11.48□□□□□ -0.57
PKNOX1-209ENST00000560448 KRBOX4Q5JUW0 171 aa11.48□□□□□ -0.57
PKNOX1-209ENST00000560448 TMEM69Q5SWH9 247 aa11.48□□□□□ -0.57
PKNOX1-209ENST00000560448 RBMS3Q6XE24 437 aaKnown RBP11.48□□□□□ -0.57
PKNOX1-209ENST00000560448 C15orf40Q8WUR7 153 aa11.48□□□□□ -0.57
PKNOX1-209ENST00000560448 DPCDQ9BVM2 203 aaPredicted RBP11.48□□□□□ -0.57
PKNOX1-209ENST00000560448 TM2D1Q9BX74 207 aa11.48□□□□□ -0.57
PKNOX1-209ENST00000560448 SELENOIQ9C0D9 397 aa11.48□□□□□ -0.57
PKNOX1-209ENST00000560448 AUNIPQ9H7T9 357 aa11.48□□□□□ -0.57
PKNOX1-209ENST00000560448 RAB9BQ9NP90 201 aa11.48□□□□□ -0.57
PKNOX1-209ENST00000560448 RBMX2Q9Y388 322 aaKnown RBP11.48□□□□□ -0.57
PKNOX1-209ENST00000560448 DSCAML1Q8TD84 2053 aa11.47□□□□□ -0.57
PKNOX1-209ENST00000560448 IGHV1-69DA0A0B4J2H0 117 aa11.47□□□□□ -0.57
PKNOX1-209ENST00000560448 CENPVL3A0A0U1RRI6 287 aa11.47□□□□□ -0.57
PKNOX1-209ENST00000560448 ODAMA1E959 279 aa11.47□□□□□ -0.57
PKNOX1-209ENST00000560448 TMEM14DPA8MWL7 114 aa11.47□□□□□ -0.57
PKNOX1-209ENST00000560448 MCRIP1C9JLW8 97 aa11.47□□□□□ -0.57
PKNOX1-209ENST00000560448 ORC5O43913 435 aa11.47□□□□□ -0.57
PKNOX1-209ENST00000560448 IGHV1-69P01742 117 aa11.47□□□□□ -0.57
PKNOX1-209ENST00000560448 VSIG8P0DPA2 414 aa11.47□□□□□ -0.57
PKNOX1-209ENST00000560448 RAB6AP20340 208 aa11.47□□□□□ -0.57
PKNOX1-209ENST00000560448 FUT3P21217 361 aa11.47□□□□□ -0.57
PKNOX1-209ENST00000560448 BTCP35070 178 aa11.47□□□□□ -0.57
PKNOX1-209ENST00000560448 RPS27AP62979 156 aaKnown RBP11.47□□□□□ -0.57
PKNOX1-209ENST00000560448 TAF9Q16594 264 aa11.47□□□□□ -0.57
PKNOX1-209ENST00000560448 SLC35E4Q6ICL7 350 aa11.47□□□□□ -0.57
PKNOX1-209ENST00000560448 OR52W1Q6IF63 320 aa11.47□□□□□ -0.57
PKNOX1-209ENST00000560448 Q8N7P7 452 aa11.47□□□□□ -0.57
PKNOX1-209ENST00000560448 SUMF2Q8NBJ7 301 aa11.47□□□□□ -0.57
PKNOX1-209ENST00000560448 OR52I2Q8NH67 350 aa11.47□□□□□ -0.57
PKNOX1-209ENST00000560448 MMP28Q9H239 520 aa11.47□□□□□ -0.57
PKNOX1-209ENST00000560448 ZMAT3Q9HA38 289 aaKnown RBP11.47□□□□□ -0.57
PKNOX1-209ENST00000560448 NIPBLQ6KC79 2804 aaeCLIP11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 SVEP1Q4LDE5 3571 aa11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 A0A1W2PP11 408 aa11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 ZNF729A6NN14 1252 aaPredicted RBP11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 MPIG6BO95866 241 aa11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 IGHV4-38-2P0DP08 117 aa11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 SLC6A1P30531 599 aa11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 AESQ08117 197 aa11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 DYRK1AQ13627 763 aa11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 ZNF273Q14593 569 aa11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 MIDNQ504T8 468 aa11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 PLA1AQ53H76 456 aa11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 RNASE12Q5GAN4 147 aaKnown RBP11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 ATAD3CQ5T2N8 411 aa11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 TRAPPC6BQ86SZ2 158 aa11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 TOMM5Q8N4H5 51 aa11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 TMEM104Q8NE00 496 aa11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 OR10A7Q8NGE5 316 aa11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 OR13D1Q8NGV5 346 aa11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 ENKURQ8TC29 256 aa11.46□□□□□ -0.57
PKNOX1-209ENST00000560448 TNFRSF14Q92956 283 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms