RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 LHX4Q969G2 390 aa9.88□□□□□ -0.83
RABGGTA-215ENST00000560207 NICN1Q9BSH3 213 aa9.88□□□□□ -0.83
RABGGTA-215ENST00000560207 ABCG5Q9H222 651 aa9.88□□□□□ -0.83
RABGGTA-215ENST00000560207 TMEM133Q9H2Q1 129 aa9.88□□□□□ -0.83
RABGGTA-215ENST00000560207 ZMAT3Q9HA38 289 aaKnown RBP9.88□□□□□ -0.83
RABGGTA-215ENST00000560207 MBNL3Q9NUK0 354 aaKnown RBP9.88□□□□□ -0.83
RABGGTA-215ENST00000560207 CALYQ9NYX4 217 aa9.88□□□□□ -0.83
RABGGTA-215ENST00000560207 RABL2AQ9UBK7 228 aaPredicted RBP9.88□□□□□ -0.83
RABGGTA-215ENST00000560207 RABL2BQ9UNT1 228 aa9.88□□□□□ -0.83
RABGGTA-215ENST00000560207 TBL2Q9Y4P3 447 aaKnown RBP9.88□□□□□ -0.83
RABGGTA-215ENST00000560207 UBE2QL1A1L167 161 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 SOCS1O15524 211 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 RGS11O94810 467 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 NAPSAO96009 420 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 APOA1P02647 267 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 FBP1P09467 338 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 CLEC2LP0C7M8 214 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 CCL3L1P16619 93 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 CDK2P24941 298 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 TALDO1P37837 337 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 CEACAM3P40198 252 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 KIR2DS4P43632 304 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 ARHGDIBP52566 201 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 KIR2DS1Q14954 304 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 MINOS1Q5TGZ0 78 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 STEAP3Q658P3 488 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 C6orf201Q7Z4U5 140 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 TPRX1Q8N7U7 411 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 C8orf31Q8N9H6 132 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 CMSS1Q9BQ75 279 aaKnown RBP9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 SULT4A1Q9BR01 284 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 FAAP24Q9BTP7 215 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 CLEC7AQ9BXN2 247 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 PECRQ9BY49 303 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 PRDM13Q9H4Q3 707 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 CHMP1AQ9HD42 196 aaPredicted RBP9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 SIRT7Q9NRC8 400 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 IDI2-AS1Q9NZ38 188 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 FAM96BQ9Y3D0 163 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 MINOS1-NBL1R4GNA1 71 aa9.87□□□□□ -0.83
RABGGTA-215ENST00000560207 NIPBLQ6KC79 2804 aaeCLIP9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 RNASEK-C17orf49H0YIS7 233 aa9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 F2RL2O00254 374 aa9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 TOR1AO14656 332 aa9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 NPFFO15130 113 aa9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 SNRPBP14678 240 aaKnown RBP9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 HIST1H1DP16402 221 aaKnown RBP9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 HOXB4P17483 251 aaPredicted RBP9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 TMEM50BP56557 158 aa9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 HTD2P86397 168 aa9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 AANATQ16613 207 aa9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 KLF17Q5JT82 389 aaPredicted RBP9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 LY6G6FQ5SQ64 297 aa9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 TCF23Q7RTU1 214 aa9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 BEND2Q8NDZ0 799 aa9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 OR13A1Q8NGR1 328 aa9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 OR9G1Q8NH87 305 aa9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 MRGPRDQ8TDS7 321 aa9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 FAM216AQ8WUB2 273 aa9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 ARL11Q969Q4 196 aa9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 GALMQ96C23 342 aa9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 ISOC1Q96CN7 298 aa9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 ARHGAP5-AS1Q96IT6 56 aa9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 GHITMQ9H3K2 345 aa9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 CCDC59Q9P031 241 aaKnown RBP9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 ADAM30Q9UKF2 790 aa9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 AMMECR1Q9Y4X0 333 aaPredicted RBP9.86□□□□□ -0.83
RABGGTA-215ENST00000560207 A0A0A6YYD4 124 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 SMIM30A4D0T7 59 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 CCDC160A6NGH7 325 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 OOSP1A8MZH6 123 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 MFNGO00587 321 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 XRCC3O43542 346 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 TCF21O43680 179 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 PAHP00439 452 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 LPLP06858 475 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 IGHV4-38-2P0DP08 117 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 DTYMKP23919 212 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 MNDAP41218 407 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 CBX5P45973 191 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 EFNB2P52799 333 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 ARFRP1Q13795 201 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 C17orf58Q2M2W7 97 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 TUSC1Q2TAM9 212 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 HACD4Q5VWC8 232 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 ZNF626Q68DY1 528 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 ZNF880Q6PDB4 577 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 Q6ZS49 121 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 TMEM86BQ8N661 226 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 SAMD12Q8N8I0 201 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 MRPL30Q8TCC3 161 aaKnown RBP9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 ZFAND2BQ8WV99 257 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 MALSU1Q96EH3 234 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 KIRREL1Q96J84 757 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 NAA50Q9GZZ1 169 aaKnown RBP9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 KCNK15Q9H427 330 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 OCEL1Q9H607 264 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 ING3Q9NXR8 418 aa9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 RSL24D1Q9UHA3 163 aaKnown RBP9.85□□□□□ -0.83
RABGGTA-215ENST00000560207 JPT1Q9UK76 154 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms