RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 RBM39Q14498 530 aaKnown RBP10.62□□□□□ -0.71
SMAD3-213ENST00000560175 FAM189A2Q15884 450 aa10.62□□□□□ -0.71
SMAD3-213ENST00000560175 HSD17B12Q53GQ0 312 aa10.62□□□□□ -0.71
SMAD3-213ENST00000560175 GLT8D1Q68CQ7 371 aa10.62□□□□□ -0.71
SMAD3-213ENST00000560175 C11orf88Q6PI97 169 aa10.62□□□□□ -0.71
SMAD3-213ENST00000560175 GFI1Q99684 422 aa10.62□□□□□ -0.71
SMAD3-213ENST00000560175 ACOT13Q9NPJ3 140 aa10.62□□□□□ -0.71
SMAD3-213ENST00000560175 ING3Q9NXR8 418 aa10.62□□□□□ -0.71
SMAD3-213ENST00000560175 PITPNC1Q9UKF7 332 aa10.62□□□□□ -0.71
SMAD3-213ENST00000560175 BLOC1S6Q9UL45 172 aa10.62□□□□□ -0.71
SMAD3-213ENST00000560175 HILPDAQ9Y5L2 63 aa10.62□□□□□ -0.71
SMAD3-213ENST00000560175 FAM90A9PA6NNJ1 464 aa10.61□□□□□ -0.71
SMAD3-213ENST00000560175 J3QR06 171 aa10.61□□□□□ -0.71
SMAD3-213ENST00000560175 F2RL2O00254 374 aa10.61□□□□□ -0.71
SMAD3-213ENST00000560175 VSIG8P0DPA2 414 aa10.61□□□□□ -0.71
SMAD3-213ENST00000560175 JUNBP17275 347 aaPredicted RBP10.61□□□□□ -0.71
SMAD3-213ENST00000560175 FUT3P21217 361 aa10.61□□□□□ -0.71
SMAD3-213ENST00000560175 GLP1RP43220 463 aa10.61□□□□□ -0.71
SMAD3-213ENST00000560175 MAP2K4P45985 399 aa10.61□□□□□ -0.71
SMAD3-213ENST00000560175 LOXL3P58215 753 aa10.61□□□□□ -0.71
SMAD3-213ENST00000560175 GABARAPL2P60520 117 aa10.61□□□□□ -0.71
SMAD3-213ENST00000560175 EMX1Q04741 257 aaPredicted RBP10.61□□□□□ -0.71
SMAD3-213ENST00000560175 Q3ZCU0 254 aa10.61□□□□□ -0.71
SMAD3-213ENST00000560175 ATAD3CQ5T2N8 411 aa10.61□□□□□ -0.71
SMAD3-213ENST00000560175 BRICD5Q6PL45 260 aa10.61□□□□□ -0.71
SMAD3-213ENST00000560175 CD200R1LQ6Q8B3 271 aa10.61□□□□□ -0.71
SMAD3-213ENST00000560175 C8orf31Q8N9H6 132 aa10.61□□□□□ -0.71
SMAD3-213ENST00000560175 NDNFQ8TB73 568 aa10.61□□□□□ -0.71
SMAD3-213ENST00000560175 MRGPRDQ8TDS7 321 aa10.61□□□□□ -0.71
SMAD3-213ENST00000560175 TM2D1Q9BX74 207 aa10.61□□□□□ -0.71
SMAD3-213ENST00000560175 YTHDF1Q9BYJ9 559 aaKnown RBP10.61□□□□□ -0.71
SMAD3-213ENST00000560175 SELENOIQ9C0D9 397 aa10.61□□□□□ -0.71
SMAD3-213ENST00000560175 MMP28Q9H239 520 aa10.61□□□□□ -0.71
SMAD3-213ENST00000560175 BANF2Q9H503 90 aa10.61□□□□□ -0.71
SMAD3-213ENST00000560175 PSG11Q9UQ72 335 aa10.61□□□□□ -0.71
SMAD3-213ENST00000560175 TMEM14DPA8MWL7 114 aa10.6□□□□□ -0.71
SMAD3-213ENST00000560175 MCRIP1C9JLW8 97 aa10.6□□□□□ -0.71
SMAD3-213ENST00000560175 GABRA5P31644 462 aa10.6□□□□□ -0.71
SMAD3-213ENST00000560175 SSTR5P35346 364 aa10.6□□□□□ -0.71
SMAD3-213ENST00000560175 CEACAM3P40198 252 aa10.6□□□□□ -0.71
SMAD3-213ENST00000560175 RPS25P62851 125 aaKnown RBP10.6□□□□□ -0.71
SMAD3-213ENST00000560175 FABP5Q01469 135 aa10.6□□□□□ -0.71
SMAD3-213ENST00000560175 SSX1Q16384 188 aa10.6□□□□□ -0.71
SMAD3-213ENST00000560175 TPTE2P1Q5T6R2 138 aa10.6□□□□□ -0.71
SMAD3-213ENST00000560175 RAB12Q6IQ22 244 aa10.6□□□□□ -0.71
SMAD3-213ENST00000560175 C16orf82Q7Z2V1 217 aa10.6□□□□□ -0.71
SMAD3-213ENST00000560175 ZNF554Q86TJ5 538 aa10.6□□□□□ -0.71
SMAD3-213ENST00000560175 THNSL2Q86YJ6 484 aa10.6□□□□□ -0.71
SMAD3-213ENST00000560175 LINC00311Q8N616 119 aa10.6□□□□□ -0.71
SMAD3-213ENST00000560175 RFESDQ8TAC1 157 aa10.6□□□□□ -0.71
SMAD3-213ENST00000560175 WIPF2Q8TF74 440 aaPredicted RBP10.6□□□□□ -0.71
SMAD3-213ENST00000560175 TMEM203Q969S6 136 aa10.6□□□□□ -0.71
SMAD3-213ENST00000560175 NPFFR1Q9GZQ6 430 aa10.6□□□□□ -0.71
SMAD3-213ENST00000560175 CCDC90BQ9GZT6 254 aa10.6□□□□□ -0.71
SMAD3-213ENST00000560175 CST11Q9H112 138 aa10.6□□□□□ -0.71
SMAD3-213ENST00000560175 ZNF702PQ9H963 129 aa10.6□□□□□ -0.71
SMAD3-213ENST00000560175 ABCB10Q9NRK6 738 aa10.6□□□□□ -0.71
SMAD3-213ENST00000560175 MBNL3Q9NUK0 354 aaKnown RBP10.6□□□□□ -0.71
SMAD3-213ENST00000560175 PEX16Q9Y5Y5 336 aa10.6□□□□□ -0.71
SMAD3-213ENST00000560175 TRAV39A0A0B4J263 110 aa10.59□□□□□ -0.71
SMAD3-213ENST00000560175 FAM172BPA6NC97 362 aa10.59□□□□□ -0.71
SMAD3-213ENST00000560175 SLC17A2O00624 439 aa10.59□□□□□ -0.71
SMAD3-213ENST00000560175 TOR1AO14656 332 aa10.59□□□□□ -0.71
SMAD3-213ENST00000560175 PDCD6O75340 191 aa10.59□□□□□ -0.71
SMAD3-213ENST00000560175 CRTAPO75718 401 aaPredicted RBP10.59□□□□□ -0.71
SMAD3-213ENST00000560175 ARL6IP5O75915 188 aa10.59□□□□□ -0.71
SMAD3-213ENST00000560175 HSMCR30P0CW71 290 aa10.59□□□□□ -0.71
SMAD3-213ENST00000560175 GALP22466 123 aa10.59□□□□□ -0.71
SMAD3-213ENST00000560175 HTR2CP28335 458 aa10.59□□□□□ -0.71
SMAD3-213ENST00000560175 RPS27AP62979 156 aaKnown RBP10.59□□□□□ -0.71
SMAD3-213ENST00000560175 UNC119Q13432 240 aa10.59□□□□□ -0.71
SMAD3-213ENST00000560175 PLA1AQ53H76 456 aa10.59□□□□□ -0.71
SMAD3-213ENST00000560175 ZNF367Q7RTV3 350 aa10.59□□□□□ -0.71
SMAD3-213ENST00000560175 FAM89BQ8N5H3 189 aa10.59□□□□□ -0.71
SMAD3-213ENST00000560175 OR6M1Q8NGM8 313 aa10.59□□□□□ -0.71
SMAD3-213ENST00000560175 OR4C13Q8NGP0 309 aa10.59□□□□□ -0.71
SMAD3-213ENST00000560175 KCNG3Q8TAE7 436 aa10.59□□□□□ -0.71
SMAD3-213ENST00000560175 CFHR4Q92496 578 aa10.59□□□□□ -0.71
SMAD3-213ENST00000560175 ARL11Q969Q4 196 aa10.59□□□□□ -0.71
SMAD3-213ENST00000560175 SERTAD4Q9NUC0 356 aa10.59□□□□□ -0.71
SMAD3-213ENST00000560175 LRRC42Q9Y546 428 aa10.59□□□□□ -0.71
SMAD3-213ENST00000560175 BPNT1O95861 308 aa10.58□□□□□ -0.72
SMAD3-213ENST00000560175 NFYBP25208 207 aa10.58□□□□□ -0.72
SMAD3-213ENST00000560175 CHATP28329 748 aa10.58□□□□□ -0.72
SMAD3-213ENST00000560175 BRS3P32247 399 aa10.58□□□□□ -0.72
SMAD3-213ENST00000560175 HABP2Q14520 560 aaPredicted RBP10.58□□□□□ -0.72
SMAD3-213ENST00000560175 TMEM30BQ3MIR4 351 aa10.58□□□□□ -0.72
SMAD3-213ENST00000560175 SYT6Q5T7P8 510 aaPredicted RBP10.58□□□□□ -0.72
SMAD3-213ENST00000560175 UBE2UQ5VVX9 321 aa10.58□□□□□ -0.72
SMAD3-213ENST00000560175 OR10K2Q6IF99 312 aa10.58□□□□□ -0.72
SMAD3-213ENST00000560175 CCDC144NLQ6NUI1 221 aa10.58□□□□□ -0.72
SMAD3-213ENST00000560175 OR2T6Q8NHC8 308 aa10.58□□□□□ -0.72
SMAD3-213ENST00000560175 ST6GALNAC6Q969X2 333 aa10.58□□□□□ -0.72
SMAD3-213ENST00000560175 CYYR1Q96J86 154 aa10.58□□□□□ -0.72
SMAD3-213ENST00000560175 WNT10AQ9GZT5 417 aa10.58□□□□□ -0.72
SMAD3-213ENST00000560175 LIN7BQ9HAP6 207 aa10.58□□□□□ -0.72
SMAD3-213ENST00000560175 NDUFB11Q9NX14 153 aa10.58□□□□□ -0.72
SMAD3-213ENST00000560175 GFOD1Q9NXC2 390 aa10.58□□□□□ -0.72
SMAD3-213ENST00000560175 ETAA1Q9NY74 926 aa10.58□□□□□ -0.72
SMAD3-213ENST00000560175 SIGLEC9Q9Y336 463 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms