RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 CD34P28906 385 aa13.68□□□□□ -0.22
RPL28-209ENST00000560055 BLVRBP30043 206 aaPredicted RBP13.68□□□□□ -0.22
RPL28-209ENST00000560055 SSTR5P35346 364 aa13.68□□□□□ -0.22
RPL28-209ENST00000560055 TGFBR1P36897 503 aa13.68□□□□□ -0.22
RPL28-209ENST00000560055 ALDH3B2P48448 385 aa13.68□□□□□ -0.22
RPL28-209ENST00000560055 EFNB2P52799 333 aa13.68□□□□□ -0.22
RPL28-209ENST00000560055 TMEM50BP56557 158 aa13.68□□□□□ -0.22
RPL28-209ENST00000560055 MXD1Q05195 221 aa13.68□□□□□ -0.22
RPL28-209ENST00000560055 KRTAP24-1Q3LI83 254 aa13.68□□□□□ -0.22
RPL28-209ENST00000560055 NKAPLQ5M9Q1 402 aa13.68□□□□□ -0.22
RPL28-209ENST00000560055 OR52W1Q6IF63 320 aa13.68□□□□□ -0.22
RPL28-209ENST00000560055 C6orf201Q7Z4U5 140 aa13.68□□□□□ -0.22
RPL28-209ENST00000560055 RTN4RL2Q86UN3 420 aa13.68□□□□□ -0.22
RPL28-209ENST00000560055 ZFAND2BQ8WV99 257 aa13.68□□□□□ -0.22
RPL28-209ENST00000560055 C17orf50Q8WW18 174 aa13.68□□□□□ -0.22
RPL28-209ENST00000560055 TMEM158Q8WZ71 300 aa13.68□□□□□ -0.22
RPL28-209ENST00000560055 PTX4Q96A99 478 aa13.68□□□□□ -0.22
RPL28-209ENST00000560055 KIRREL1Q96J84 757 aa13.68□□□□□ -0.22
RPL28-209ENST00000560055 HSF4Q9ULV5 492 aa13.68□□□□□ -0.22
RPL28-209ENST00000560055 UBE2QL1A1L167 161 aa13.67□□□□□ -0.22
RPL28-209ENST00000560055 C15orf65H3BRN8 121 aa13.67□□□□□ -0.22
RPL28-209ENST00000560055 MELTFP08582 738 aa13.67□□□□□ -0.22
RPL28-209ENST00000560055 FBP1P09467 338 aa13.67□□□□□ -0.22
RPL28-209ENST00000560055 GZMHP20718 246 aa13.67□□□□□ -0.22
RPL28-209ENST00000560055 UBA52P62987 128 aaKnown RBP13.67□□□□□ -0.22
RPL28-209ENST00000560055 BAMBIQ13145 260 aa13.67□□□□□ -0.22
RPL28-209ENST00000560055 SLC9A3R2Q15599 337 aa13.67□□□□□ -0.22
RPL28-209ENST00000560055 LDLRAD2Q5SZI1 272 aa13.67□□□□□ -0.22
RPL28-209ENST00000560055 UTF1Q5T230 341 aa13.67□□□□□ -0.22
RPL28-209ENST00000560055 OR10A7Q8NGE5 316 aa13.67□□□□□ -0.22
RPL28-209ENST00000560055 CCDC107Q8WV48 283 aa13.67□□□□□ -0.22
RPL28-209ENST00000560055 FAAP24Q9BTP7 215 aa13.67□□□□□ -0.22
RPL28-209ENST00000560055 CLEC7AQ9BXN2 247 aa13.67□□□□□ -0.22
RPL28-209ENST00000560055 MBNL3Q9NUK0 354 aaKnown RBP13.67□□□□□ -0.22
RPL28-209ENST00000560055 ZNRD1Q9P1U0 126 aa13.67□□□□□ -0.22
RPL28-209ENST00000560055 HOXA3O43365 443 aaPredicted RBP13.66□□□□□ -0.22
RPL28-209ENST00000560055 ORC5O43913 435 aa13.66□□□□□ -0.22
RPL28-209ENST00000560055 ARG1P05089 322 aa13.66□□□□□ -0.22
RPL28-209ENST00000560055 VEGFCP49767 419 aa13.66□□□□□ -0.22
RPL28-209ENST00000560055 PLAC9Q5JTB6 97 aa13.66□□□□□ -0.22
RPL28-209ENST00000560055 SLC16A12Q6ZSM3 486 aa13.66□□□□□ -0.22
RPL28-209ENST00000560055 TMEM86BQ8N661 226 aa13.66□□□□□ -0.22
RPL28-209ENST00000560055 BEND2Q8NDZ0 799 aa13.66□□□□□ -0.22
RPL28-209ENST00000560055 OR56B1Q8NGI3 324 aa13.66□□□□□ -0.22
RPL28-209ENST00000560055 OR4K15Q8NH41 348 aa13.66□□□□□ -0.22
RPL28-209ENST00000560055 MRPL30Q8TCC3 161 aaKnown RBP13.66□□□□□ -0.22
RPL28-209ENST00000560055 ZDHHC16Q969W1 377 aa13.66□□□□□ -0.22
RPL28-209ENST00000560055 ZMAT3Q9HA38 289 aaKnown RBP13.66□□□□□ -0.22
RPL28-209ENST00000560055 PLEKHJ1Q9NW61 149 aa13.66□□□□□ -0.22
RPL28-209ENST00000560055 IDI2-AS1Q9NZ38 188 aa13.66□□□□□ -0.22
RPL28-209ENST00000560055 DAPK2Q9UIK4 370 aa13.66□□□□□ -0.22
RPL28-209ENST00000560055 FAM96BQ9Y3D0 163 aa13.66□□□□□ -0.22
RPL28-209ENST00000560055 TBL2Q9Y4P3 447 aaKnown RBP13.66□□□□□ -0.22
RPL28-209ENST00000560055 RAB27BO00194 218 aa13.65□□□□□ -0.22
RPL28-209ENST00000560055 NAPSAO96009 420 aa13.65□□□□□ -0.22
RPL28-209ENST00000560055 IGLV1-47P01700 117 aa13.65□□□□□ -0.22
RPL28-209ENST00000560055 RNASE1P07998 156 aaKnown RBP13.65□□□□□ -0.22
RPL28-209ENST00000560055 RCC1P18754 421 aaPredicted RBP13.65□□□□□ -0.22
RPL28-209ENST00000560055 IER3P46695 156 aa13.65□□□□□ -0.22
RPL28-209ENST00000560055 LSM3P62310 102 aaKnown RBP13.65□□□□□ -0.22
RPL28-209ENST00000560055 Q6ZPA2 131 aa13.65□□□□□ -0.22
RPL28-209ENST00000560055 LHFPL4Q7Z7J7 247 aa13.65□□□□□ -0.22
RPL28-209ENST00000560055 ABHD12Q8N2K0 398 aa13.65□□□□□ -0.22
RPL28-209ENST00000560055 OR4P4Q8NGL7 312 aa13.65□□□□□ -0.22
RPL28-209ENST00000560055 RFESDQ8TAC1 157 aa13.65□□□□□ -0.22
RPL28-209ENST00000560055 SSMEM1Q8WWF3 244 aa13.65□□□□□ -0.22
RPL28-209ENST00000560055 ARHGAP5-AS1Q96IT6 56 aa13.65□□□□□ -0.22
RPL28-209ENST00000560055 DUX5Q96PT3 197 aa13.65□□□□□ -0.22
RPL28-209ENST00000560055 MEGF9Q9H1U4 602 aa13.65□□□□□ -0.22
RPL28-209ENST00000560055 ZNF286AQ9HBT8 521 aa13.65□□□□□ -0.22
RPL28-209ENST00000560055 TRAPPC2LQ9UL33 140 aa13.65□□□□□ -0.22
RPL28-209ENST00000560055 POMT1Q9Y6A1 747 aa13.65□□□□□ -0.22
RPL28-209ENST00000560055 FAM172BPA6NC97 362 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 C12orf77C9JDV5 145 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 TRIM77I1YAP6 450 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 F2RL2O00254 374 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 TMEM127O75204 238 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 GABARAPO95166 117 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 PAHP00439 452 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 SNRPBP14678 240 aaKnown RBP13.64□□□□□ -0.23
RPL28-209ENST00000560055 RPS19P39019 145 aaKnown RBP13.64□□□□□ -0.23
RPL28-209ENST00000560055 LGALS4P56470 323 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 SCAND1P57086 179 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 LOXL3P58215 753 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 NCS1P62166 190 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 FAM189A2Q15884 450 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 MOGAT2Q3SYC2 334 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 C6orf183Q5T699 404 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 MINOS1Q5TGZ0 78 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 ZNF880Q6PDB4 577 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 Q6ZTK2 550 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 ZNF554Q86TJ5 538 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 ANKRD13BQ86YJ7 626 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 LGALS14Q8TCE9 139 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 FAM216AQ8WUB2 273 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 ARL11Q969Q4 196 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 PECRQ9BY49 303 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 KCNK7Q9Y2U2 307 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 MINOS1-NBL1R4GNA1 71 aa13.64□□□□□ -0.23
RPL28-209ENST00000560055 TRBV6-6A0A0A6YYG2 114 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms