RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 APOL4Q9BPW4 351 aa6.84□□□□□ -1.31
SNRPA1-208ENST00000559686 SSBP4Q9BWG4 385 aaPredicted RBP6.84□□□□□ -1.31
SNRPA1-208ENST00000559686 TOLLIPQ9H0E2 274 aa6.84□□□□□ -1.31
SNRPA1-208ENST00000559686 IL1RAPQ9NPH3 570 aa6.84□□□□□ -1.31
SNRPA1-208ENST00000559686 OR52A1Q9UKL2 312 aa6.84□□□□□ -1.31
SNRPA1-208ENST00000559686 COPS3Q9UNS2 423 aa6.84□□□□□ -1.31
SNRPA1-208ENST00000559686 PKHD1P08F94 4074 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 MEIKINA0A087WXM9 373 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 TRAV41A0A0B4J266 112 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 A0A1W2PN81 502 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 H3BN98 237 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 IGLV1-40P01703 118 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 LGALS1P09382 135 aaKnown RBP6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 CHRNA7P36544 502 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 FUT6P51993 359 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 CDC42P60953 191 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 ZNF816Q0VGE8 651 aaPredicted RBP6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 MRPL28Q13084 256 aaKnown RBP6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 APOFQ13790 326 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 ECSCRQ19T08 205 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 SPIN3Q5JUX0 258 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 CPOQ8IVL8 374 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 IZUMO1Q8IYV9 350 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 ZNF679Q8IYX0 411 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 PGAM4Q8N0Y7 254 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 MRGPRDQ8TDS7 321 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 MS4A10Q96PG2 267 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 HOPXQ9BPY8 73 aaPredicted RBP6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 KRTAP4-5Q9BYR2 181 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 ZCCHC4Q9H5U6 513 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 HMG20AQ9NP66 347 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 KIF25Q9UIL4 384 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 PRELID1Q9Y255 219 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 A3GALT2U3KPV4 340 aa6.83□□□□□ -1.32
SNRPA1-208ENST00000559686 TNCP24821 2201 aa6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 IZUMO1RA6ND01 250 aa6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 NUPR2A6NF83 97 aa6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 SLC33A1O00400 549 aaPredicted RBP6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 RPP14O95059 124 aaKnown RBP6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 IL1AP01583 271 aa6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 HSPB1P04792 205 aaKnown RBP6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 COX4I1P13073 169 aa6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 BLVRBP30043 206 aaPredicted RBP6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 HTR1FP30939 366 aa6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 SSTR5P35346 364 aa6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 MAGEA2P43356 314 aa6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 RANBP1P43487 201 aa6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 MTCP1P56278 107 aa6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 PSME3P61289 254 aa6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 EWSR1Q01844 656 aaKnown RBP eCLIP6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 SMUG1Q53HV7 270 aa6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 TOR2AQ5JU69 321 aa6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 HDXQ7Z353 690 aa6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 ELMOD2Q8IZ81 293 aa6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 OR5D18Q8NGL1 313 aa6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 WFDC10AQ9H1F0 79 aa6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 MRPS28Q9Y2Q9 187 aaKnown RBP6.82□□□□□ -1.32
SNRPA1-208ENST00000559686 DYNC1H1Q14204 4646 aaKnown RBP6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 IGHV3-43A0A0B4J1X8 118 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 IGKV1-12A0A0C4DH73 117 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 DEGS1O15121 323 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 SYT7O43581 403 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 ZNF254O75437 659 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 SRSF10O75494 262 aaKnown RBP6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 GATBO75879 557 aaKnown RBP6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 RGS11O94810 467 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 CNIH1O95406 144 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 IGKV1D-12P01611 117 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 GSTP1P09211 210 aaKnown RBP6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 IGHV3-43DP0DP04 118 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 CD1BP29016 333 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 C21orf33P30042 268 aaPredicted RBP6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 KIR3DL2P43630 455 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 RBP2P50120 134 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 ATP1B3P54709 279 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 CD81P60033 236 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 MMDQ15546 238 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 THOC7Q6I9Y2 204 aaKnown RBP6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 C8orf82Q6P1X6 216 aaPredicted RBP6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 DEGS2Q6QHC5 323 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 DEFB125Q8N687 156 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 LINC00469Q8N7U9 141 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 ZNF565Q8N9K5 539 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 TMEM104Q8NE00 496 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 RTN4IP1Q8WWV3 396 aaPredicted RBP6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 FLYWCH2Q96CP2 140 aaKnown RBP6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 SPACA5Q96QH8 159 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 NR1H4Q96RI1 486 aaPredicted RBP6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 MNTQ99583 582 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 NIPSNAP1Q9BPW8 284 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 SIKE1Q9BRV8 207 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 YIPF3Q9GZM5 350 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 EFCAB1Q9HAE3 211 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 SEBOXQ9HB31 216 aaPredicted RBP6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 NEK6Q9HC98 313 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 SIGLEC8Q9NYZ4 499 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 RAB21Q9UL25 225 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 R4GMQ9 66 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 FAT2Q9NYQ8 4349 aa6.81□□□□□ -1.32
SNRPA1-208ENST00000559686 SHISA3A0PJX4 238 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms