RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 CENPOQ9BU64 300 aa15.16■□□□□ 0.02
CASC4-209ENST00000559222 NCOR1P1Q9H4R4 102 aa15.16■□□□□ 0.02
CASC4-209ENST00000559222 ETAA1Q9NY74 926 aa15.16■□□□□ 0.02
CASC4-209ENST00000559222 LOC100506127A0A0U1RQW1 187 aa15.15■□□□□ 0.02
CASC4-209ENST00000559222 FOXI3A8MTJ6 420 aaPredicted RBP15.15■□□□□ 0.02
CASC4-209ENST00000559222 MCRIP1C9JLW8 97 aa15.15■□□□□ 0.02
CASC4-209ENST00000559222 C15orf65H3BRN8 121 aa15.15■□□□□ 0.02
CASC4-209ENST00000559222 AIPO00170 330 aa15.15■□□□□ 0.02
CASC4-209ENST00000559222 IL1AP01583 271 aa15.15■□□□□ 0.02
CASC4-209ENST00000559222 FUT3P21217 361 aa15.15■□□□□ 0.02
CASC4-209ENST00000559222 NFYBP25208 207 aa15.15■□□□□ 0.02
CASC4-209ENST00000559222 ACTG1P63261 375 aa15.15■□□□□ 0.02
CASC4-209ENST00000559222 C2orf76Q3KRA6 126 aa15.15■□□□□ 0.02
CASC4-209ENST00000559222 OR2W3Q7Z3T1 314 aa15.15■□□□□ 0.02
CASC4-209ENST00000559222 BEND2Q8NDZ0 799 aa15.15■□□□□ 0.02
CASC4-209ENST00000559222 OR4P4Q8NGL7 312 aa15.15■□□□□ 0.02
CASC4-209ENST00000559222 SSMEM1Q8WWF3 244 aa15.15■□□□□ 0.02
CASC4-209ENST00000559222 YIPF6Q96EC8 236 aa15.15■□□□□ 0.02
CASC4-209ENST00000559222 CLEC7AQ9BXN2 247 aa15.15■□□□□ 0.02
CASC4-209ENST00000559222 IDI2-AS1Q9NZ38 188 aa15.15■□□□□ 0.02
CASC4-209ENST00000559222 STEAP1Q9UHE8 339 aa15.15■□□□□ 0.02
CASC4-209ENST00000559222 SSR3Q9UNL2 185 aa15.15■□□□□ 0.02
CASC4-209ENST00000559222 IFITM5A6NNB3 132 aa15.14■□□□□ 0.01
CASC4-209ENST00000559222 NPIPB11E5RHQ5 1161 aa15.14■□□□□ 0.01
CASC4-209ENST00000559222 PDCD5O14737 125 aa15.14■□□□□ 0.01
CASC4-209ENST00000559222 PAHP00439 452 aa15.14■□□□□ 0.01
CASC4-209ENST00000559222 GAPTQ8N292 157 aa15.14■□□□□ 0.01
CASC4-209ENST00000559222 ABHD12Q8N2K0 398 aa15.14■□□□□ 0.01
CASC4-209ENST00000559222 MRPL30Q8TCC3 161 aaKnown RBP15.14■□□□□ 0.01
CASC4-209ENST00000559222 FAAP24Q9BTP7 215 aa15.14■□□□□ 0.01
CASC4-209ENST00000559222 LINC00574Q9H8X3 128 aa15.14■□□□□ 0.01
CASC4-209ENST00000559222 SPACA1Q9HBV2 294 aa15.14■□□□□ 0.01
CASC4-209ENST00000559222 FAM181BA6NEQ2 426 aa15.13■□□□□ 0.01
CASC4-209ENST00000559222 H3BUX3 64 aa15.13■□□□□ 0.01
CASC4-209ENST00000559222 RCC1P18754 421 aaPredicted RBP15.13■□□□□ 0.01
CASC4-209ENST00000559222 CFPP27918 469 aa15.13■□□□□ 0.01
CASC4-209ENST00000559222 CD34P28906 385 aa15.13■□□□□ 0.01
CASC4-209ENST00000559222 BLVRBP30043 206 aaPredicted RBP15.13■□□□□ 0.01
CASC4-209ENST00000559222 SDC2P34741 201 aa15.13■□□□□ 0.01
CASC4-209ENST00000559222 C16orf87Q6PH81 154 aa15.13■□□□□ 0.01
CASC4-209ENST00000559222 PIFOQ8TCI5 191 aa15.13■□□□□ 0.01
CASC4-209ENST00000559222 HDHD3Q9BSH5 251 aaPredicted RBP15.13■□□□□ 0.01
CASC4-209ENST00000559222 IGHV3-43A0A0B4J1X8 118 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 A0A1W2PPE3 182 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 C12orf77C9JDV5 145 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 GPR137BO60478 399 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 IGLV1-47P01700 117 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 IGHV3-43DP0DP04 118 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 VEGFCP49767 419 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 RAB13P51153 203 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 LGALS4P56470 323 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 TMEM50BP56557 158 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 RELBQ01201 579 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 MXD1Q05195 221 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 RBM39Q14498 530 aaKnown RBP15.12■□□□□ 0.01
CASC4-209ENST00000559222 SSX2Q16385 188 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 LY6EQ16553 131 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 MOGAT2Q3SYC2 334 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 FBLN7Q53RD9 439 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 OLFML2AQ68BL7 652 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 FAM89BQ8N5H3 189 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 TMEM86BQ8N661 226 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 ZNF565Q8N9K5 539 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 OR1L1Q8NH94 360 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 ARL11Q969Q4 196 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 NEDD4LQ96PU5 975 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 SSX3Q99909 188 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 MEGF9Q9H1U4 602 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 ZMAT3Q9HA38 289 aaKnown RBP15.12■□□□□ 0.01
CASC4-209ENST00000559222 LIN7BQ9HAP6 207 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 TBL2Q9Y4P3 447 aaKnown RBP15.12■□□□□ 0.01
CASC4-209ENST00000559222 HILPDAQ9Y5L2 63 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 POMT1Q9Y6A1 747 aa15.12■□□□□ 0.01
CASC4-209ENST00000559222 A0A087X0M5 115 aa15.11■□□□□ 0.01
CASC4-209ENST00000559222 A0A1B0GX30 115 aa15.11■□□□□ 0.01
CASC4-209ENST00000559222 TMEM89A2RUT3 159 aa15.11■□□□□ 0.01
CASC4-209ENST00000559222 GNG10P50151 68 aa15.11■□□□□ 0.01
CASC4-209ENST00000559222 LSM3P62310 102 aaKnown RBP15.11■□□□□ 0.01
CASC4-209ENST00000559222 PLAC9Q5JTB6 97 aa15.11■□□□□ 0.01
CASC4-209ENST00000559222 NDNFQ8TB73 568 aa15.11■□□□□ 0.01
CASC4-209ENST00000559222 FBLN5Q9UBX5 448 aa15.11■□□□□ 0.01
CASC4-209ENST00000559222 TRAPPC2LQ9UL33 140 aa15.11■□□□□ 0.01
CASC4-209ENST00000559222 GLAP06280 429 aa15.1■□□□□ 0.01
CASC4-209ENST00000559222 HKR1P10072 659 aa15.1■□□□□ 0.01
CASC4-209ENST00000559222 SNRPBP14678 240 aaKnown RBP15.1■□□□□ 0.01
CASC4-209ENST00000559222 PSMD7P51665 324 aa15.1■□□□□ 0.01
CASC4-209ENST00000559222 FAM189A2Q15884 450 aa15.1■□□□□ 0.01
CASC4-209ENST00000559222 LRRC75BQ2VPJ9 315 aa15.1■□□□□ 0.01
CASC4-209ENST00000559222 HLA-DRB5Q30154 266 aa15.1■□□□□ 0.01
CASC4-209ENST00000559222 OR52W1Q6IF63 320 aa15.1■□□□□ 0.01
CASC4-209ENST00000559222 PRR18Q8N4B5 295 aa15.1■□□□□ 0.01
CASC4-209ENST00000559222 GCDHQ92947 438 aaPredicted RBP15.1■□□□□ 0.01
CASC4-209ENST00000559222 ARHGAP5-AS1Q96IT6 56 aa15.1■□□□□ 0.01
CASC4-209ENST00000559222 KCTD7Q96MP8 289 aa15.1■□□□□ 0.01
CASC4-209ENST00000559222 URM1Q9BTM9 101 aaKnown RBP15.1■□□□□ 0.01
CASC4-209ENST00000559222 C1RLQ9NZP8 487 aa15.1■□□□□ 0.01
CASC4-209ENST00000559222 AK3Q9UIJ7 227 aa15.1■□□□□ 0.01
CASC4-209ENST00000559222 VPREB3Q9UKI3 123 aa15.1■□□□□ 0.01
CASC4-209ENST00000559222 PSG11Q9UQ72 335 aa15.1■□□□□ 0.01
CASC4-209ENST00000559222 STAB1Q9NY15 2570 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms