RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 MFNGO00587 321 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 IL1AP01583 271 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 GLAP06280 429 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 RCC1P18754 421 aaPredicted RBP9.28□□□□□ -0.92
SNX1-204ENST00000559061 RAB6AP20340 208 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 CDK2P24941 298 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 CD34P28906 385 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 BLVRBP30043 206 aaPredicted RBP9.28□□□□□ -0.92
SNX1-204ENST00000559061 VEGFCP49767 419 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 PSMD7P51665 324 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 LOXL3P58215 753 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 FBLN7Q53RD9 439 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 GPR107Q5VW38 600 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 NCR3LG1Q68D85 454 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 ZNF626Q68DY1 528 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 ZNF880Q6PDB4 577 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 USP43Q70EL4 1123 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 TRAPPC6BQ86SZ2 158 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 TEX29Q8N6K0 151 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 OR4P4Q8NGL7 312 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 OR4K15Q8NH41 348 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 NDNFQ8TB73 568 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 LEAP2Q969E1 77 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 DUX5Q96PT3 197 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 MDFIQ99750 246 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 SUCNR1Q9BXA5 334 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 PECRQ9BY49 303 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 MS4A7Q9GZW8 240 aaPredicted RBP9.28□□□□□ -0.92
SNX1-204ENST00000559061 TMEM133Q9H2Q1 129 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 SPACA1Q9HBV2 294 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 ETAA1Q9NY74 926 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 OR6C3Q9NZP0 311 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 AK3Q9UIJ7 227 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 RAB22AQ9UL26 194 aa9.28□□□□□ -0.92
SNX1-204ENST00000559061 ATRQ13535 2644 aa9.27□□□□□ -0.93
SNX1-204ENST00000559061 MCRIP1C9JLW8 97 aa9.27□□□□□ -0.93
SNX1-204ENST00000559061 IGLV1-47P01700 117 aa9.27□□□□□ -0.93
SNX1-204ENST00000559061 MELTFP08582 738 aa9.27□□□□□ -0.93
SNX1-204ENST00000559061 GUCA2AQ02747 115 aa9.27□□□□□ -0.93
SNX1-204ENST00000559061 BLMHQ13867 455 aa9.27□□□□□ -0.93
SNX1-204ENST00000559061 SLC9A3R2Q15599 337 aa9.27□□□□□ -0.93
SNX1-204ENST00000559061 TIMM50Q3ZCQ8 353 aa9.27□□□□□ -0.93
SNX1-204ENST00000559061 Q6YL49 198 aa9.27□□□□□ -0.93
SNX1-204ENST00000559061 LDLRAD3Q86YD5 345 aa9.27□□□□□ -0.93
SNX1-204ENST00000559061 OR1L1Q8NH94 360 aa9.27□□□□□ -0.93
SNX1-204ENST00000559061 RFESDQ8TAC1 157 aa9.27□□□□□ -0.93
SNX1-204ENST00000559061 TAF15Q92804 592 aaKnown RBP eCLIP9.27□□□□□ -0.93
SNX1-204ENST00000559061 PTX4Q96A99 478 aa9.27□□□□□ -0.93
SNX1-204ENST00000559061 HSF4Q9ULV5 492 aa9.27□□□□□ -0.93
SNX1-204ENST00000559061 TRBV6-6A0A0A6YYG2 114 aa9.26□□□□□ -0.93
SNX1-204ENST00000559061 A0A1W2PPH5 198 aa9.26□□□□□ -0.93
SNX1-204ENST00000559061 FUOMA2VDF0 154 aa9.26□□□□□ -0.93
SNX1-204ENST00000559061 F2RL2O00254 374 aa9.26□□□□□ -0.93
SNX1-204ENST00000559061 TCF21O43680 179 aa9.26□□□□□ -0.93
SNX1-204ENST00000559061 IGHV3-7P01780 117 aa9.26□□□□□ -0.93
SNX1-204ENST00000559061 BPIFB3P59826 476 aa9.26□□□□□ -0.93
SNX1-204ENST00000559061 UBA52P62987 128 aaKnown RBP9.26□□□□□ -0.93
SNX1-204ENST00000559061 SPCS2Q15005 226 aa9.26□□□□□ -0.93
SNX1-204ENST00000559061 HMGN3Q15651 99 aa9.26□□□□□ -0.93
SNX1-204ENST00000559061 MIDNQ504T8 468 aa9.26□□□□□ -0.93
SNX1-204ENST00000559061 IDNKQ5T6J7 187 aa9.26□□□□□ -0.93
SNX1-204ENST00000559061 ZNF439Q8NDP4 499 aa9.26□□□□□ -0.93
SNX1-204ENST00000559061 PIFOQ8TCI5 191 aa9.26□□□□□ -0.93
SNX1-204ENST00000559061 NEK7Q8TDX7 302 aa9.26□□□□□ -0.93
SNX1-204ENST00000559061 SLC25A46Q96AG3 418 aa9.26□□□□□ -0.93
SNX1-204ENST00000559061 URM1Q9BTM9 101 aaKnown RBP9.26□□□□□ -0.93
SNX1-204ENST00000559061 GAL3ST2Q9H3Q3 398 aa9.26□□□□□ -0.93
SNX1-204ENST00000559061 IDI2-AS1Q9NZ38 188 aa9.26□□□□□ -0.93
SNX1-204ENST00000559061 MEIOCA2RUB1 952 aa9.25□□□□□ -0.93
SNX1-204ENST00000559061 LY6LH3BQJ8 138 aa9.25□□□□□ -0.93
SNX1-204ENST00000559061 SLC31A2O15432 143 aa9.25□□□□□ -0.93
SNX1-204ENST00000559061 HOXA3O43365 443 aaPredicted RBP9.25□□□□□ -0.93
SNX1-204ENST00000559061 ORC5O43913 435 aa9.25□□□□□ -0.93
SNX1-204ENST00000559061 IGHV4-59P01825 116 aa9.25□□□□□ -0.93
SNX1-204ENST00000559061 ARG1P05089 322 aa9.25□□□□□ -0.93
SNX1-204ENST00000559061 GNB3P16520 340 aa9.25□□□□□ -0.93
SNX1-204ENST00000559061 FPR2P25090 351 aa9.25□□□□□ -0.93
SNX1-204ENST00000559061 IER3P46695 156 aa9.25□□□□□ -0.93
SNX1-204ENST00000559061 SERPINB10P48595 397 aa9.25□□□□□ -0.93
SNX1-204ENST00000559061 RBM39Q14498 530 aaKnown RBP9.25□□□□□ -0.93
SNX1-204ENST00000559061 GNMTQ14749 295 aa9.25□□□□□ -0.93
SNX1-204ENST00000559061 LTC4SQ16873 150 aa9.25□□□□□ -0.93
SNX1-204ENST00000559061 GPR141Q7Z602 305 aa9.25□□□□□ -0.93
SNX1-204ENST00000559061 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.25□□□□□ -0.93
SNX1-204ENST00000559061 OR10R2Q8NGX6 335 aa9.25□□□□□ -0.93
SNX1-204ENST00000559061 NEDD4LQ96PU5 975 aa9.25□□□□□ -0.93
SNX1-204ENST00000559061 CLEC7AQ9BXN2 247 aa9.25□□□□□ -0.93
SNX1-204ENST00000559061 RBM38Q9H0Z9 239 aaKnown RBP9.25□□□□□ -0.93
SNX1-204ENST00000559061 HEXA-AS1Q9H8Q6 139 aa9.25□□□□□ -0.93
SNX1-204ENST00000559061 ZMAT3Q9HA38 289 aaKnown RBP9.25□□□□□ -0.93
SNX1-204ENST00000559061 IGKV1D-8A0A087WSZ0 117 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 A0A0A6YYJ9 748 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 IGHV3-43A0A0B4J1X8 118 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 IGKV1-6A0A0C4DH72 117 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 A0A1W2PPE3 182 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 CLDN34H7C241 214 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 CA11O75493 328 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 IFNA2P01563 188 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 HBZP02008 142 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 IGHV3-43DP0DP04 118 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms