RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 LY6G5BQ8NDX9 201 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 GCDHQ92947 438 aaPredicted RBP5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 FAHD2AQ96GK7 314 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 DMRTB1Q96MA1 342 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 SCPEP1Q9HB40 452 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 ZNF286AQ9HBT8 521 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 IFT46Q9NQC8 304 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 MMP26Q9NRE1 261 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 TAS2R3Q9NYW6 316 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 CALYQ9NYX4 217 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 ELF5Q9UKW6 265 aaPredicted RBP5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 KCNK7Q9Y2U2 307 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 UBE2J1Q9Y385 318 aaPredicted RBP5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 INSIG2Q9Y5U4 225 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 KPTNQ9Y664 436 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 ABCA2Q9BZC7 2435 aa5.44□□□□□ -1.54
CHRNA3-204ENST00000559002 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 TRBV6-6A0A0A6YYG2 114 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 KBTBD11-OT1A0A1B0GTJ5 212 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 MEIS3P1A6NDR6 274 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 C12orf77C9JDV5 145 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 J3QLI3 93 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 SULT1C2O00338 296 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 CD5LO43866 347 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 ORC5O43913 435 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 SSX5O60225 188 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 TOX4O94842 621 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 HLA-DQB1P01920 261 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 LPLP06858 475 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 MELTFP08582 738 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 FOSL1P15407 271 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 RCC1P18754 421 aaPredicted RBP5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 SSTR5P35346 364 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 KIR2DS4P43632 304 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 ARPC4P59998 168 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 ERVFRD-1P60508 538 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 HLA-DRB3P79483 266 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 GUCA2AQ02747 115 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 PAX2Q02962 417 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 KIR2DS1Q14954 304 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 PYDC2Q56P42 97 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 PRAMEF5Q5TYX0 476 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 ZNF880Q6PDB4 577 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 LINC00299Q6ZSB3 139 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 TCF23Q7RTU1 214 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 ZNF554Q86TJ5 538 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 CCDC190Q86UF4 302 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 RFESDQ8TAC1 157 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 UBALD1Q8TB05 177 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 MAFIPQ8WZ33 124 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 CORO2AQ92828 525 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 ARL11Q969Q4 196 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 DACT3Q96B18 629 aaPredicted RBP5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 PCGF1Q9BSM1 259 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 ST6GALNAC5Q9BVH7 336 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 TMUB1Q9BVT8 246 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 C7orf69Q9H7B7 122 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 METTL8Q9H825 291 aaKnown RBP5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 TAF9BQ9HBM6 251 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 Q9N2K0 584 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 MBNL3Q9NUK0 354 aaKnown RBP5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 OPN4Q9UHM6 478 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 ZNF230Q9UIE0 474 aaPredicted RBP5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 AUP1Q9Y679 476 aa5.43□□□□□ -1.54
CHRNA3-204ENST00000559002 F8P00451 2351 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 ZNF469Q96JG9 3925 aaPredicted RBP5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 MEIOCA2RUB1 952 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 C17orf98A8MV24 154 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 TRDCB7Z8K6 153 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 GABARAPH6UMI1 98 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 FABP7O15540 132 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 HSPA12AO43301 675 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 HBZP02008 142 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 RBP4P02753 201 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 FCER2P06734 321 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 IGHV1-8P0DP01 117 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 HNF1AP20823 631 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 OMGP23515 440 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 NFYBP25208 207 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 PTBP1P26599 531 aaKnown RBP eCLIP5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 RCVRNP35243 200 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 ETV6P41212 452 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 DLX6P56179 175 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 ACTBP60709 375 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 ACTG1P63261 375 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 PAX8Q06710 450 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 HMGN3Q15651 99 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 SRSF7Q16629 238 aaKnown RBP eCLIP5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 LTC4SQ16873 150 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 C17orf58Q2M2W7 97 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 TMEM30BQ3MIR4 351 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 CHRFAM7AQ494W8 412 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 OR52W1Q6IF63 320 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 CLEC9AQ6UXN8 241 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 HEPN1Q6WQI6 88 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 ZNF782Q6ZMW2 699 aaPredicted RBP5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 C1orf122Q6ZSJ8 110 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 VMO1Q7Z5L0 202 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 HOGA1Q86XE5 327 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 TEX29Q8N6K0 151 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms