RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 WWTR1Q9GZV5 400 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 OR51B6Q9H340 312 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 GSX1Q9H4S2 264 aaPredicted RBP9.65□□□□□ -0.86
PCAT29-201ENST00000558411 MANBALQ9NQG1 85 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 IGKV3D-11A0A0A0MRZ8 115 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 TRAV39A0A0B4J263 110 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 TRBV11-1A0A0K0K1C0 115 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 OR6C6A6NF89 314 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 NKX6-3A6NJ46 265 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 IFNL4K9M1U5 179 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 CCL5P13501 91 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 CDAP32320 146 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 RTP5Q14D33 572 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 PRSS8Q16651 343 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 DMRTC1Q5HYR2 192 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 Q6ZS49 121 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 ZNF525Q8N782 197 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 MRPL30Q8TCC3 161 aaKnown RBP9.65□□□□□ -0.86
PCAT29-201ENST00000558411 RNASE8Q8TDE3 154 aaKnown RBP9.65□□□□□ -0.86
PCAT29-201ENST00000558411 LHX4Q969G2 390 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 TECTBQ96PL2 329 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 RNF208Q9H0X6 261 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 ZNF160Q9HCG1 818 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 TMEM9BQ9NQ34 198 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 TAAR3PQ9P1P4 343 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 TIMM9Q9Y5J7 89 aa9.65□□□□□ -0.86
PCAT29-201ENST00000558411 H0Y8X5 98 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 MMP23AO75900 390 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 BPIFB3P59826 476 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 FOXL1Q12952 345 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 BATFQ16520 125 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 Q6ZWC4 215 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 OR4B1Q8NGF8 309 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 OR1N1Q8NGS0 311 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 SLC37A2Q8TED4 501 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 EXTL1Q92935 676 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 FOXJ2Q9P0K8 574 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 A0A1W2PN81 502 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 C5orf63A6NC05 138 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 H0Y980 276 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 NUPR1O60356 82 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 CNOT4O95628 575 aaKnown RBP9.64□□□□□ -0.87
PCAT29-201ENST00000558411 PDGFBP01127 241 aaPredicted RBP9.64□□□□□ -0.87
PCAT29-201ENST00000558411 GCH1P30793 250 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 CHRNA7P36544 502 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 YPEL3P61236 119 aaPredicted RBP9.64□□□□□ -0.87
PCAT29-201ENST00000558411 PPP1CBP62140 327 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 MFAP5Q13361 173 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 SRSF7Q16629 238 aaKnown RBP eCLIP9.64□□□□□ -0.87
PCAT29-201ENST00000558411 HIST3H3Q16695 136 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 ZNF295-AS1Q8N0V1 137 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 METTL27Q8N6F8 245 aaPredicted RBP9.64□□□□□ -0.87
PCAT29-201ENST00000558411 ZNF441Q8N8Z8 693 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 NUDT22Q9BRQ3 303 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 SLC39A9Q9NUM3 307 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 IL36GQ9NZH8 169 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 ZNF581Q9P0T4 197 aa9.64□□□□□ -0.87
PCAT29-201ENST00000558411 LAMA3Q16787 3333 aa9.63□□□□□ -0.87
PCAT29-201ENST00000558411 VSTM2BA6NLU5 285 aa9.63□□□□□ -0.87
PCAT29-201ENST00000558411 MLNRO43193 412 aa9.63□□□□□ -0.87
PCAT29-201ENST00000558411 PDCD6O75340 191 aa9.63□□□□□ -0.87
PCAT29-201ENST00000558411 HBG1P69891 147 aa9.63□□□□□ -0.87
PCAT29-201ENST00000558411 HBG2P69892 147 aa9.63□□□□□ -0.87
PCAT29-201ENST00000558411 TMEM267Q0VDI3 215 aaPredicted RBP9.63□□□□□ -0.87
PCAT29-201ENST00000558411 MALLQ13021 153 aa9.63□□□□□ -0.87
PCAT29-201ENST00000558411 CNN3Q15417 329 aaKnown RBP9.63□□□□□ -0.87
PCAT29-201ENST00000558411 CLEC12BQ2HXU8 276 aa9.63□□□□□ -0.87
PCAT29-201ENST00000558411 CDCP2Q5VXM1 449 aa9.63□□□□□ -0.87
PCAT29-201ENST00000558411 CST9LP1Q5W188 147 aa9.63□□□□□ -0.87
PCAT29-201ENST00000558411 KCNE4Q8WWG9 221 aa9.63□□□□□ -0.87
PCAT29-201ENST00000558411 DYRK2Q92630 601 aa9.63□□□□□ -0.87
PCAT29-201ENST00000558411 OBP2AQ9NY56 170 aa9.63□□□□□ -0.87
PCAT29-201ENST00000558411 SLC45A2Q9UMX9 530 aa9.63□□□□□ -0.87
PCAT29-201ENST00000558411 PAM16Q9Y3D7 125 aa9.63□□□□□ -0.87
PCAT29-201ENST00000558411 WIPI2Q9Y4P8 454 aa9.63□□□□□ -0.87
PCAT29-201ENST00000558411 A0A0U1RQK1 487 aa9.62□□□□□ -0.87
PCAT29-201ENST00000558411 ZNF320A2RRD8 509 aa9.62□□□□□ -0.87
PCAT29-201ENST00000558411 KIAA1324LA8MWY0 1029 aaPredicted RBP9.62□□□□□ -0.87
PCAT29-201ENST00000558411 HS3ST1O14792 307 aa9.62□□□□□ -0.87
PCAT29-201ENST00000558411 OPN1LWP04000 364 aa9.62□□□□□ -0.87
PCAT29-201ENST00000558411 MNX1P50219 401 aaPredicted RBP9.62□□□□□ -0.87
PCAT29-201ENST00000558411 PTTG1IPP53801 180 aa9.62□□□□□ -0.87
PCAT29-201ENST00000558411 YPEL5P62699 121 aa9.62□□□□□ -0.87
PCAT29-201ENST00000558411 RAC1P63000 192 aa9.62□□□□□ -0.87
PCAT29-201ENST00000558411 RUNX3Q13761 415 aa9.62□□□□□ -0.87
PCAT29-201ENST00000558411 TDRG1Q3Y452 100 aa9.62□□□□□ -0.87
PCAT29-201ENST00000558411 SPIN3Q5JUX0 258 aa9.62□□□□□ -0.87
PCAT29-201ENST00000558411 FAM78BQ5VT40 261 aa9.62□□□□□ -0.87
PCAT29-201ENST00000558411 RABEPKQ7Z6M1 372 aa9.62□□□□□ -0.87
PCAT29-201ENST00000558411 OSR2Q8N2R0 312 aa9.62□□□□□ -0.87
PCAT29-201ENST00000558411 CPEB3Q8NE35 698 aaKnown RBP9.62□□□□□ -0.87
PCAT29-201ENST00000558411 GJC3Q8NFK1 279 aa9.62□□□□□ -0.87
PCAT29-201ENST00000558411 OR2D3Q8NGH3 330 aa9.62□□□□□ -0.87
PCAT29-201ENST00000558411 CIB3Q96Q77 187 aaPredicted RBP9.62□□□□□ -0.87
PCAT29-201ENST00000558411 WDR61Q9GZS3 305 aaKnown RBP9.62□□□□□ -0.87
PCAT29-201ENST00000558411 NCOR1P1Q9H4R4 102 aa9.62□□□□□ -0.87
PCAT29-201ENST00000558411 SLC7A10Q9NS82 523 aa9.62□□□□□ -0.87
PCAT29-201ENST00000558411 COPS7AQ9UBW8 275 aa9.62□□□□□ -0.87
PCAT29-201ENST00000558411 CCDC163A0A0D9SF12 145 aa9.62□□□□□ -0.87
PCAT29-201ENST00000558411 TRAF3IP2O43734 574 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms