RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 MRPS34P82930 218 aaKnown RBP4.79□□□□□ -1.64
GABPB1-207ENST00000558335 BAXQ07812 192 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 FOXF1Q12946 379 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 POU2AF1Q16633 256 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 PRSS8Q16651 343 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 IAH1Q2TAA2 248 aaPredicted RBP4.79□□□□□ -1.64
GABPB1-207ENST00000558335 TMEM249Q2WGJ8 235 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 DEFB133Q30KQ1 61 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 TMEM164Q5U3C3 297 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 C1QL3Q5VWW1 255 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 ASPHD2Q6ICH7 369 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 FAM71F2Q6NXP2 309 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 ZNF562Q6V9R5 426 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 TMPPEQ6ZT21 453 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 LINC00596Q86U02 117 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 WDR5BQ86VZ2 330 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 LGI3Q8N145 548 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 KLHDC1Q8N7A1 406 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 FADS6Q8N9I5 356 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 ZSCAN4Q8NAM6 433 aaPredicted RBP4.79□□□□□ -1.64
GABPB1-207ENST00000558335 POC1AQ8NBT0 407 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 NFAM1Q8NET5 270 aaPredicted RBP4.79□□□□□ -1.64
GABPB1-207ENST00000558335 LYPD6BQ8NI32 183 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 GLMPQ8WWB7 406 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 DNASE2BQ8WZ79 361 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 ADAT3Q96EY9 351 aaPredicted RBP4.79□□□□□ -1.64
GABPB1-207ENST00000558335 AKR1E2Q96JD6 320 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 SIGMAR1Q99720 223 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 NICN1Q9BSH3 213 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 ADAT1Q9BUB4 502 aaKnown RBP4.79□□□□□ -1.64
GABPB1-207ENST00000558335 OR11A1Q9GZK7 315 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 SLC35B3Q9H1N7 401 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 ZNF286AQ9HBT8 521 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 KCNJ16Q9NPI9 418 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 FKBP11Q9NYL4 201 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 RNF150Q9ULK6 438 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 MRPS16Q9Y3D3 137 aaKnown RBP4.79□□□□□ -1.64
GABPB1-207ENST00000558335 RHBDD3Q9Y3P4 386 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 LHFPL6Q9Y693 200 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 PCNTO95613 3336 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 SRCAPQ6ZRS2 3230 aa4.79□□□□□ -1.64
GABPB1-207ENST00000558335 TRBV24-1A0A075B6N3 115 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 LOC105371242A0A075B767 164 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 TMEM265A0A087WTH1 108 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 TMEM213A2RRL7 107 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 CDC14CA4D256 554 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 OR6C6A6NF89 314 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 CRYM-AS1A6NIL9 109 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 ZNF814B7Z6K7 855 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 J3QR89 54 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 XRCC2O43543 280 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 TRAF3IP2O43734 574 aaPredicted RBP4.78□□□□□ -1.64
GABPB1-207ENST00000558335 DEDDO75618 318 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 SCRG1O75711 98 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 IL18BPO95998 194 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 IGLV3-1P01715 115 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 AMBPP02760 352 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 ZNF728P0DKX0 622 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 FGF5P12034 268 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 F2RP25116 425 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 GPR12P47775 334 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 GABRA2P47869 451 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 THBS3P49746 956 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 NPY4RP50391 375 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 FUT6P51993 359 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 PRSS12P56730 875 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 CLDN15P56746 228 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 OR1D5P58170 312 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 S100A10P60903 97 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 CKS1BP61024 79 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 UBE2KP61086 200 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 HERV-K104P61576 105 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 PAFAH1B2P68402 229 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 MALLQ13021 153 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 MFAP5Q13361 173 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 ATXN7L3Q14CW9 347 aaPredicted RBP4.78□□□□□ -1.64
GABPB1-207ENST00000558335 ACOT6Q3I5F7 207 aaPredicted RBP4.78□□□□□ -1.64
GABPB1-207ENST00000558335 SNAI3Q3KNW1 292 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 SPIN3Q5JUX0 258 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 C9orf50Q5SZB4 431 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 STPG1Q5TH74 334 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 FAM27BQ5VT28 67 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 TMEM211Q6ICI0 200 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 DHRS11Q6UWP2 260 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 UNQ6126/PRO20091Q6UXV3 157 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 Q6ZS49 121 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 FAM57BQ71RH2 274 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 SPRED2Q7Z698 418 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 SLC35E3Q7Z769 313 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 SAXO1Q8IYX7 474 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 OR5AS1Q8N127 324 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 SPEM1Q8N4L4 309 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 APCDD1LQ8NCL9 501 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 OR2M3Q8NG83 312 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 OR4B1Q8NGF8 309 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 OR8B12Q8NGG6 310 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 OR4P4Q8NGL7 312 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 OR4A4PQ8NGN8 299 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 OR1L6Q8NGR2 347 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 OR1P1Q8NH06 330 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms