RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 A0A1W2PPK0 400 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 WI2-2373I1.2A0A1W2PRP0 233 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 FAM90A18PA6NE21 464 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 FAM90A16PA6NEW6 464 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 FAM90A20PA6NIJ5 464 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 FAM90A9PA6NNJ1 464 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 FAM90A12PA8MX19 464 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 FAM90A5PA8MXJ8 464 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 NPIPB11E5RHQ5 1161 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 WBP4O75554 376 aaKnown RBP12.3□□□□□ -0.44
TPM1-211ENST00000558314 GAPDHP04406 335 aaKnown RBP12.3□□□□□ -0.44
TPM1-211ENST00000558314 FAM90A15PP0C7V4 464 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 FAM90A13PP0C7W8 464 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 FAM90A14PP0C7W9 464 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 FAM90A24PP0C7X0 464 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 DCKP27707 260 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 KRTAP10-11P60412 298 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 RPL23AP62750 156 aaKnown RBP12.3□□□□□ -0.44
TPM1-211ENST00000558314 SLC35B1P78383 322 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 RIPK1Q13546 671 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 LRRC36Q1X8D7 754 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 FOXRED2Q8IWF2 684 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 MRPL41Q8IXM3 137 aaKnown RBP12.3□□□□□ -0.44
TPM1-211ENST00000558314 OR8H3Q8N146 312 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 PRR18Q8N4B5 295 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 STX19Q8N4C7 294 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 JAGN1Q8N5M9 183 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 RBMXL1Q96E39 390 aaKnown RBP12.3□□□□□ -0.44
TPM1-211ENST00000558314 DUX3Q96PT4 197 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 NCOR1P1Q9H4R4 102 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 MRPS18AQ9NVS2 196 aaKnown RBP12.3□□□□□ -0.44
TPM1-211ENST00000558314 BABAM2Q9NXR7 383 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 CLEC2DQ9UHP7 191 aa12.3□□□□□ -0.44
TPM1-211ENST00000558314 IGHV1-3A0A0C4DH29 117 aa12.29□□□□□ -0.44
TPM1-211ENST00000558314 AIPO00170 330 aa12.29□□□□□ -0.44
TPM1-211ENST00000558314 GZMHP20718 246 aa12.29□□□□□ -0.44
TPM1-211ENST00000558314 CCDC58Q4VC31 144 aa12.29□□□□□ -0.44
TPM1-211ENST00000558314 ASCL4Q6XD76 172 aa12.29□□□□□ -0.44
TPM1-211ENST00000558314 OR2W3Q7Z3T1 314 aa12.29□□□□□ -0.44
TPM1-211ENST00000558314 LINC00482Q8N8I6 264 aa12.29□□□□□ -0.44
TPM1-211ENST00000558314 OR10A7Q8NGE5 316 aa12.29□□□□□ -0.44
TPM1-211ENST00000558314 OR10V1Q8NGI7 309 aa12.29□□□□□ -0.44
TPM1-211ENST00000558314 GHSRQ92847 366 aa12.29□□□□□ -0.44
TPM1-211ENST00000558314 MUL1Q969V5 352 aa12.29□□□□□ -0.44
TPM1-211ENST00000558314 SMIM19Q96E16 107 aa12.29□□□□□ -0.44
TPM1-211ENST00000558314 PAK1IP1Q9NWT1 392 aaPredicted RBP12.29□□□□□ -0.44
TPM1-211ENST00000558314 CKLFQ9UBR5 152 aa12.29□□□□□ -0.44
TPM1-211ENST00000558314 TRAPPC2LQ9UL33 140 aa12.29□□□□□ -0.44
TPM1-211ENST00000558314 EXOSC1Q9Y3B2 195 aaKnown RBP12.29□□□□□ -0.44
TPM1-211ENST00000558314 IRGMA1A4Y4 181 aa12.28□□□□□ -0.44
TPM1-211ENST00000558314 MAGEA13PA6NCF6 341 aa12.28□□□□□ -0.44
TPM1-211ENST00000558314 LINC01548A6NM66 108 aa12.28□□□□□ -0.44
TPM1-211ENST00000558314 FGF16O43320 207 aa12.28□□□□□ -0.44
TPM1-211ENST00000558314 DUS4LO95620 317 aaKnown RBP12.28□□□□□ -0.44
TPM1-211ENST00000558314 LALBAP00709 142 aa12.28□□□□□ -0.44
TPM1-211ENST00000558314 GTF2F2P13984 249 aa12.28□□□□□ -0.44
TPM1-211ENST00000558314 IL3RAP26951 378 aa12.28□□□□□ -0.44
TPM1-211ENST00000558314 ETV3LQ6ZN32 361 aa12.28□□□□□ -0.44
TPM1-211ENST00000558314 LCNL1Q6ZST4 164 aa12.28□□□□□ -0.44
TPM1-211ENST00000558314 OR4K15Q8NH41 348 aa12.28□□□□□ -0.44
TPM1-211ENST00000558314 EAF1Q96JC9 268 aaPredicted RBP12.28□□□□□ -0.44
TPM1-211ENST00000558314 LINC00574Q9H8X3 128 aa12.28□□□□□ -0.44
TPM1-211ENST00000558314 IL36GQ9NZH8 169 aa12.28□□□□□ -0.44
TPM1-211ENST00000558314 GNG12Q9UBI6 72 aa12.28□□□□□ -0.44
TPM1-211ENST00000558314 MRPS28Q9Y2Q9 187 aaKnown RBP12.28□□□□□ -0.44
TPM1-211ENST00000558314 MCRIP1C9JLW8 97 aa12.27□□□□□ -0.45
TPM1-211ENST00000558314 SLC31A2O15432 143 aa12.27□□□□□ -0.45
TPM1-211ENST00000558314 ZNF780AO75290 641 aaPredicted RBP12.27□□□□□ -0.45
TPM1-211ENST00000558314 MAS1P04201 325 aa12.27□□□□□ -0.45
TPM1-211ENST00000558314 MED21Q13503 144 aa12.27□□□□□ -0.45
TPM1-211ENST00000558314 AWAT2Q6E213 333 aa12.27□□□□□ -0.45
TPM1-211ENST00000558314 GLIPR1L1Q6UWM5 242 aa12.27□□□□□ -0.45
TPM1-211ENST00000558314 SLC16A12Q6ZSM3 486 aa12.27□□□□□ -0.45
TPM1-211ENST00000558314 STPG2Q8N412 459 aa12.27□□□□□ -0.45
TPM1-211ENST00000558314 Q8NFD4 153 aa12.27□□□□□ -0.45
TPM1-211ENST00000558314 OR2T10Q8NGZ9 312 aa12.27□□□□□ -0.45
TPM1-211ENST00000558314 TMEM80Q96HE8 168 aa12.27□□□□□ -0.45
TPM1-211ENST00000558314 RASL11BQ9BPW5 248 aa12.27□□□□□ -0.45
TPM1-211ENST00000558314 BANF2Q9H503 90 aa12.27□□□□□ -0.45
TPM1-211ENST00000558314 GFOD1Q9NXC2 390 aa12.27□□□□□ -0.45
TPM1-211ENST00000558314 ETAA1Q9NY74 926 aa12.27□□□□□ -0.45
TPM1-211ENST00000558314 TRAV8-7A0A075B6U6 113 aa12.26□□□□□ -0.45
TPM1-211ENST00000558314 ZNF736B4DX44 427 aaPredicted RBP12.26□□□□□ -0.45
TPM1-211ENST00000558314 C15orf65H3BRN8 121 aa12.26□□□□□ -0.45
TPM1-211ENST00000558314 EBAG9O00559 213 aa12.26□□□□□ -0.45
TPM1-211ENST00000558314 OGG1O15527 345 aa12.26□□□□□ -0.45
TPM1-211ENST00000558314 MT-ND4P03905 459 aa12.26□□□□□ -0.45
TPM1-211ENST00000558314 THBS3P49746 956 aa12.26□□□□□ -0.45
TPM1-211ENST00000558314 ZNF816Q0VGE8 651 aaPredicted RBP12.26□□□□□ -0.45
TPM1-211ENST00000558314 MPV17LQ2QL34 196 aa12.26□□□□□ -0.45
TPM1-211ENST00000558314 Q499Y3 187 aa12.26□□□□□ -0.45
TPM1-211ENST00000558314 NHLRC3Q5JS37 347 aa12.26□□□□□ -0.45
TPM1-211ENST00000558314 SYT6Q5T7P8 510 aaPredicted RBP12.26□□□□□ -0.45
TPM1-211ENST00000558314 C11orf87Q6NUJ2 197 aa12.26□□□□□ -0.45
TPM1-211ENST00000558314 LINC00596Q86U02 117 aa12.26□□□□□ -0.45
TPM1-211ENST00000558314 ZNF695Q8IW36 515 aa12.26□□□□□ -0.45
TPM1-211ENST00000558314 OR1L1Q8NH94 360 aa12.26□□□□□ -0.45
TPM1-211ENST00000558314 OR14A2Q96R54 314 aa12.26□□□□□ -0.45
TPM1-211ENST00000558314 GPR61Q9BZJ8 451 aa12.26□□□□□ -0.45
TPM1-211ENST00000558314 SELENOIQ9C0D9 397 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms