RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 GPR50Q13585 617 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 RBM39Q14498 530 aaKnown RBP8.1□□□□□ -1.11
USP3-207ENST00000558218 PIGYQ3MUY2 71 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 PLA1AQ53H76 456 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 TPTE2P1Q5T6R2 138 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 TMEM219Q86XT9 240 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 NDUFA11Q86Y39 141 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 MS4A15Q8N5U1 240 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 NKAIN3Q8N8D7 197 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 C8orf31Q8N9H6 132 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 SUMF2Q8NBJ7 301 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 OR13A1Q8NGR1 328 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 RBM14Q96PK6 669 aaKnown RBP8.1□□□□□ -1.11
USP3-207ENST00000558218 ZNF184Q99676 751 aaPredicted RBP8.1□□□□□ -1.11
USP3-207ENST00000558218 UQCC2Q9BRT2 126 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 MMP28Q9H239 520 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 PPIL3Q9H2H8 161 aaKnown RBP8.1□□□□□ -1.11
USP3-207ENST00000558218 CALYQ9NYX4 217 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 GHRLQ9UBU3 117 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 TRRAPQ9Y4A5 3859 aa8.1□□□□□ -1.11
USP3-207ENST00000558218 TMEM30CPA0ZSE6 113 aa8.09□□□□□ -1.11
USP3-207ENST00000558218 OR7C1O76099 320 aaPredicted RBP8.09□□□□□ -1.11
USP3-207ENST00000558218 GNAO1P09471 354 aa8.09□□□□□ -1.11
USP3-207ENST00000558218 VSIG10L2P0DP72 767 aa8.09□□□□□ -1.11
USP3-207ENST00000558218 CELP19835 753 aa8.09□□□□□ -1.11
USP3-207ENST00000558218 NFYBP25208 207 aa8.09□□□□□ -1.11
USP3-207ENST00000558218 GDNFP39905 211 aa8.09□□□□□ -1.11
USP3-207ENST00000558218 RAB7AP51149 207 aa8.09□□□□□ -1.11
USP3-207ENST00000558218 MADCAM1Q13477 382 aa8.09□□□□□ -1.11
USP3-207ENST00000558218 TMEM30BQ3MIR4 351 aa8.09□□□□□ -1.11
USP3-207ENST00000558218 SLC22A6Q4U2R8 563 aa8.09□□□□□ -1.11
USP3-207ENST00000558218 PDLIM3Q53GG5 364 aaPredicted RBP8.09□□□□□ -1.11
USP3-207ENST00000558218 LAIR2Q6ISS4 152 aa8.09□□□□□ -1.11
USP3-207ENST00000558218 LYPD6Q86Y78 171 aa8.09□□□□□ -1.11
USP3-207ENST00000558218 OR8H3Q8N146 312 aa8.09□□□□□ -1.11
USP3-207ENST00000558218 BPIFB6Q8NFQ5 453 aa8.09□□□□□ -1.11
USP3-207ENST00000558218 OR10K1Q8NGX5 313 aa8.09□□□□□ -1.11
USP3-207ENST00000558218 MYDGFQ969H8 173 aa8.09□□□□□ -1.11
USP3-207ENST00000558218 RPEQ96AT9 228 aa8.09□□□□□ -1.11
USP3-207ENST00000558218 DERL3Q96Q80 235 aa8.09□□□□□ -1.11
USP3-207ENST00000558218 SCN3BQ9NY72 215 aa8.09□□□□□ -1.11
USP3-207ENST00000558218 PSG11Q9UQ72 335 aa8.09□□□□□ -1.11
USP3-207ENST00000558218 TRAV8-7A0A075B6U6 113 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 MCRIP1C9JLW8 97 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 HSPB6O14558 160 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 GEMIN2O14893 280 aaKnown RBP8.08□□□□□ -1.12
USP3-207ENST00000558218 KCNAB3O43448 404 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 XPNPEP2O43895 674 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 TSPAN15O95858 294 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 MT-ND4P03905 459 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 CDK1P06493 297 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 GSTP1P09211 210 aaKnown RBP8.08□□□□□ -1.12
USP3-207ENST00000558218 SERPINA2P20848 420 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 GLP1RP43220 463 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 VDAC2P45880 294 aaPredicted RBP8.08□□□□□ -1.12
USP3-207ENST00000558218 C6orf141Q5SZD1 244 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 ATAD3CQ5T2N8 411 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 STEAP3Q658P3 488 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 TRAT1Q6PIZ9 186 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 UNQ9370/PRO34162Q6UXP9 181 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 BAIAP2L2Q6UXY1 529 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 ZNF497Q6ZNH5 498 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 AHSA2Q719I0 299 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 ZNF554Q86TJ5 538 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 GAPTQ8N292 157 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 LINC00311Q8N616 119 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 OR4F17Q8NGA8 305 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 FAM110DQ8TAY7 271 aaPredicted RBP8.08□□□□□ -1.12
USP3-207ENST00000558218 PLPPR1Q8TBJ4 325 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 MRGPRDQ8TDS7 321 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 OR14A2Q96R54 314 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 OR4F4Q96R69 305 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 SLC25A33Q9BSK2 321 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 ING3Q9NXR8 418 aa8.08□□□□□ -1.12
USP3-207ENST00000558218 RCC2Q9P258 522 aaKnown RBP8.08□□□□□ -1.12
USP3-207ENST00000558218 MRPS28Q9Y2Q9 187 aaKnown RBP8.08□□□□□ -1.12
USP3-207ENST00000558218 C15orf65H3BRN8 121 aa8.07□□□□□ -1.12
USP3-207ENST00000558218 CCRL2O00421 344 aa8.07□□□□□ -1.12
USP3-207ENST00000558218 PIN1P1O15428 100 aa8.07□□□□□ -1.12
USP3-207ENST00000558218 GAPDHP04406 335 aaKnown RBP8.07□□□□□ -1.12
USP3-207ENST00000558218 UBBP0CG47 229 aa8.07□□□□□ -1.12
USP3-207ENST00000558218 CD37P11049 281 aa8.07□□□□□ -1.12
USP3-207ENST00000558218 JUNBP17275 347 aaPredicted RBP8.07□□□□□ -1.12
USP3-207ENST00000558218 FUT3P21217 361 aa8.07□□□□□ -1.12
USP3-207ENST00000558218 RANBP1P43487 201 aa8.07□□□□□ -1.12
USP3-207ENST00000558218 CD83Q01151 205 aa8.07□□□□□ -1.12
USP3-207ENST00000558218 ZNF816Q0VGE8 651 aaPredicted RBP8.07□□□□□ -1.12
USP3-207ENST00000558218 HABP2Q14520 560 aaPredicted RBP8.07□□□□□ -1.12
USP3-207ENST00000558218 SPHARQ15513 63 aa8.07□□□□□ -1.12
USP3-207ENST00000558218 GLIPR1L1Q6UWM5 242 aa8.07□□□□□ -1.12
USP3-207ENST00000558218 CENPVQ7Z7K6 275 aaPredicted RBP8.07□□□□□ -1.12
USP3-207ENST00000558218 JAGN1Q8N5M9 183 aa8.07□□□□□ -1.12
USP3-207ENST00000558218 ZFP41Q8N8Y5 198 aa8.07□□□□□ -1.12
USP3-207ENST00000558218 OR5AU1Q8NGC0 362 aa8.07□□□□□ -1.12
USP3-207ENST00000558218 OR13C5Q8NGS8 318 aa8.07□□□□□ -1.12
USP3-207ENST00000558218 RFESDQ8TAC1 157 aa8.07□□□□□ -1.12
USP3-207ENST00000558218 PHYHIPQ92561 330 aa8.07□□□□□ -1.12
USP3-207ENST00000558218 TOMM40LQ969M1 308 aa8.07□□□□□ -1.12
USP3-207ENST00000558218 MND1Q9BWT6 205 aa8.07□□□□□ -1.12
USP3-207ENST00000558218 TPRKBQ9Y3C4 175 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms