RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 GAB4Q2WGN9 574 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 VSTM2LQ96N03 204 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 BOKQ9UMX3 212 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-248ENST00000558190 UBE2L5PA0A1B0GUS4 154 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 TMEM189A5PLL7 270 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 P01737 135 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 DLX1P56177 255 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 PRAMEF5Q5TYX0 476 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 PRAMEF6Q5VXH4 476 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 FER1L6-AS1Q8NA97 138 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 OR1N1Q8NGS0 311 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 OR8B2Q96RD0 313 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 PEF1Q9UBV8 284 aaKnown RBP3.23□□□□□ -1.89
ATXN3-248ENST00000558190 TRBV5-7A0A0A0MS05 114 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 C16orf47Q6ZP98 133 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-248ENST00000558190 RPS19BP1Q86WX3 136 aaKnown RBP3.23□□□□□ -1.89
ATXN3-248ENST00000558190 ZNF683Q8IZ20 524 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 SGK494Q96LW2 274 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 GPX1P07203 203 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 MAS1LP35410 378 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 ASCL3Q9NQ33 180 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 SRSF12Q8WXF0 261 aaKnown RBP3.23□□□□□ -1.89
ATXN3-248ENST00000558190 BOD1Q96IK1 185 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 WNT16Q9UBV4 365 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 HS3ST2Q9Y278 367 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 CD226Q15762 336 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 LHFPL4Q7Z7J7 247 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 NAA38Q9BRA0 125 aaKnown RBP3.23□□□□□ -1.89
ATXN3-248ENST00000558190 SEBOXQ9HB31 216 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-248ENST00000558190 CA3P07451 260 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 HMGA1P17096 107 aaKnown RBP3.23□□□□□ -1.89
ATXN3-248ENST00000558190 TNFRSF4P43489 277 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 RPS23P62266 143 aaKnown RBP3.23□□□□□ -1.89
ATXN3-248ENST00000558190 BCL6BQ8N143 479 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-248ENST00000558190 PNKDQ8N490 385 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 CDX2Q99626 313 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-248ENST00000558190 CLEC5AQ9NY25 188 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 FGF16O43320 207 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 TOX2Q96NM4 488 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 GNB4Q9HAV0 340 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 LHFPL2Q6ZUX7 228 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 CCL4L1Q8NHW4 92 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 LEPP41159 167 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 KLRB1Q12918 225 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 WFDC3Q8IUB2 231 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 WDR34Q96EX3 536 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 PLPPR2Q96GM1 343 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 SNHG12Q9BXW3 62 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 KDM5DQ9BY66 1539 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 TRBV5-3A0A0A0MS03 114 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 CD5LO43866 347 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 SOD2P04179 222 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 LINC00614P0C842 121 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 MRPS11P82912 194 aaKnown RBP3.23□□□□□ -1.89
ATXN3-248ENST00000558190 ZNF502Q8TBZ5 544 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 CLN8Q9UBY8 286 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 CCL26Q9Y258 94 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 VAX1Q5SQQ9 334 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 CLDND2Q8NHS1 167 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 MYH11P35749 1972 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 MPLP40238 635 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 HHEXQ03014 270 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 DEFB110Q30KQ9 67 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 PYY3Q5JQD4 70 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 CLLU1OSQ5K130 101 aa3.23□□□□□ -1.89
ATXN3-248ENST00000558190 PARS2Q7L3T8 475 aaKnown RBP3.23□□□□□ -1.89
ATXN3-248ENST00000558190 PXNP49023 591 aaPredicted RBP3.22□□□□□ -1.89
ATXN3-248ENST00000558190 OR4S2Q8NH73 311 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 DENND4BO75064 1496 aaPredicted RBP3.22□□□□□ -1.89
ATXN3-248ENST00000558190 EGR1P18146 543 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 NMUP48645 174 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 ZP1P60852 638 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 RFNGQ9Y644 331 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 Q8WTZ3 238 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 SLC25A33Q9BSK2 321 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 DECR2Q9NUI1 292 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 ADAMTS12P58397 1594 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 ABCC1P33527 1531 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 GAGE12JA6NER3 117 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 GAGE7O76087 117 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 CXCL1P09341 107 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 GAGE12FP0CL80 117 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 GAGE12GP0CL81 117 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 GAGE12IP0CL82 117 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 GAGE4Q13068 117 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 RUNX3Q13761 415 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 TMEM38BQ9NVV0 291 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 A0A087WWC5 75 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 TRBV5-5A0A0J9YX44 114 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 C2CD3Q4AC94 2353 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 HNRNPA1P09651 372 aaKnown RBP eCLIP3.22□□□□□ -1.89
ATXN3-248ENST00000558190 SRSF1Q07955 248 aaKnown RBP eCLIP3.22□□□□□ -1.89
ATXN3-248ENST00000558190 SRSF5Q13243 272 aaKnown RBP3.22□□□□□ -1.89
ATXN3-248ENST00000558190 MIC13Q5XKP0 118 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 UTP23Q9BRU9 249 aaKnown RBP3.22□□□□□ -1.89
ATXN3-248ENST00000558190 CD1BP29016 333 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 MBNL2Q5VZF2 373 aaKnown RBP3.22□□□□□ -1.89
ATXN3-248ENST00000558190 DEFB132Q7Z7B7 95 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 TGIF2LYQ8IUE0 185 aa3.22□□□□□ -1.89
ATXN3-248ENST00000558190 LRTM2Q8N967 370 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms