RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 ARHGAP5-AS1Q96IT6 56 aa7.36□□□□□ -1.23
CHD8-214ENST00000557727 BCL7BQ9BQE9 202 aa7.36□□□□□ -1.23
CHD8-214ENST00000557727 FAAP24Q9BTP7 215 aa7.36□□□□□ -1.23
CHD8-214ENST00000557727 DCSTAMPQ9H295 470 aa7.36□□□□□ -1.23
CHD8-214ENST00000557727 SPACA1Q9HBV2 294 aa7.36□□□□□ -1.23
CHD8-214ENST00000557727 SIRT7Q9NRC8 400 aa7.36□□□□□ -1.23
CHD8-214ENST00000557727 ONECUT1Q9UBC0 465 aa7.36□□□□□ -1.23
CHD8-214ENST00000557727 LPAR3Q9UBY5 353 aa7.36□□□□□ -1.23
CHD8-214ENST00000557727 CDC42EP3Q9UKI2 254 aa7.36□□□□□ -1.23
CHD8-214ENST00000557727 HSF4Q9ULV5 492 aa7.36□□□□□ -1.23
CHD8-214ENST00000557727 UBE2J1Q9Y385 318 aaPredicted RBP7.36□□□□□ -1.23
CHD8-214ENST00000557727 TRBV6-6A0A0A6YYG2 114 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 TRAV40A0A0B4J280 105 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 hADV38S2A0JD32 116 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 UBE2QL1A1L167 161 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 CCDC160A6NGH7 325 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 NPIPB11E5RHQ5 1161 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 IGHV1-8P0DP01 117 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 BLVRBP30043 206 aaPredicted RBP7.35□□□□□ -1.23
CHD8-214ENST00000557727 VEGFCP49767 419 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 KLRD1Q13241 179 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 LDLRAD2Q5SZI1 272 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 METTL11BQ5VVY1 283 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 FOXB2Q5VYV0 432 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 CDPF1Q6NVV7 123 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 ZNF880Q6PDB4 577 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 C9orf139Q6ZV77 190 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 USP43Q70EL4 1123 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 BCL6BQ8N143 479 aaPredicted RBP7.35□□□□□ -1.23
CHD8-214ENST00000557727 PNKDQ8N490 385 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 OR10R2Q8NGX6 335 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 ZNF714Q96N38 554 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 HDHD3Q9BSH5 251 aaPredicted RBP7.35□□□□□ -1.23
CHD8-214ENST00000557727 PCGF1Q9BSM1 259 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 URM1Q9BTM9 101 aaKnown RBP7.35□□□□□ -1.23
CHD8-214ENST00000557727 PECRQ9BY49 303 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 ABCG5Q9H222 651 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 METTL8Q9H825 291 aaKnown RBP7.35□□□□□ -1.23
CHD8-214ENST00000557727 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.35□□□□□ -1.23
CHD8-214ENST00000557727 MBNL3Q9NUK0 354 aaKnown RBP7.35□□□□□ -1.23
CHD8-214ENST00000557727 RHBDL2Q9NX52 303 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 ING3Q9NXR8 418 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 TAS2R3Q9NYW6 316 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 ABRACLQ9P1F3 81 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 ZNF69Q9UC07 566 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 AK3Q9UIJ7 227 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 ELF5Q9UKW6 265 aaPredicted RBP7.35□□□□□ -1.23
CHD8-214ENST00000557727 SPATA2Q9UM82 520 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 ETV7Q9Y603 341 aa7.35□□□□□ -1.23
CHD8-214ENST00000557727 COL6A5A8TX70 2615 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 IGHV3OR16-10A0A075B7F0 116 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 MEIKINA0A087WXM9 373 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 A0A087X0M5 115 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 KBTBD11-OT1A0A1B0GTJ5 212 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 A0A1B0GX30 115 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 TMEM30CPA0ZSE6 113 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 A6NHS1 94 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 ZNF729A6NN14 1252 aaPredicted RBP7.34□□□□□ -1.23
CHD8-214ENST00000557727 ODF3BA8MYP8 253 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 MCRIP1C9JLW8 97 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 CA11O75493 328 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 FAM157CP0CG43 387 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 RCC1P18754 421 aaPredicted RBP7.34□□□□□ -1.23
CHD8-214ENST00000557727 SSTR5P35346 364 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 RBM39Q14498 530 aaKnown RBP7.34□□□□□ -1.23
CHD8-214ENST00000557727 CHRFAM7AQ494W8 412 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 RUSC1-AS1Q66K80 236 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 FAM53AQ6NSI3 398 aaPredicted RBP7.34□□□□□ -1.23
CHD8-214ENST00000557727 HEPN1Q6WQI6 88 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 BRD3OSQ6XYD6 125 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 CROCCP3Q8IVE0 287 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 CMTM4Q8IZR5 234 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 OR56B1Q8NGI3 324 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 NANPQ8TBE9 248 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 KIRREL1Q96J84 757 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 ZNF48Q96MX3 618 aaPredicted RBP7.34□□□□□ -1.23
CHD8-214ENST00000557727 NEDD4LQ96PU5 975 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 BEX2Q9BXY8 128 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 ETAA1Q9NY74 926 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 CALYQ9NYX4 217 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 OR6C3Q9NZP0 311 aa7.34□□□□□ -1.23
CHD8-214ENST00000557727 TRGV10A0A0A0MS01 117 aa7.33□□□□□ -1.24
CHD8-214ENST00000557727 IGHV1-69DA0A0B4J2H0 117 aa7.33□□□□□ -1.24
CHD8-214ENST00000557727 SMIM31A0A1B0GVY4 71 aa7.33□□□□□ -1.24
CHD8-214ENST00000557727 FUOMA2VDF0 154 aa7.33□□□□□ -1.24
CHD8-214ENST00000557727 C12orf77C9JDV5 145 aa7.33□□□□□ -1.24
CHD8-214ENST00000557727 F2RL2O00254 374 aa7.33□□□□□ -1.24
CHD8-214ENST00000557727 EREGO14944 169 aa7.33□□□□□ -1.24
CHD8-214ENST00000557727 CLPXO76031 633 aa7.33□□□□□ -1.24
CHD8-214ENST00000557727 IGHV1-69P01742 117 aa7.33□□□□□ -1.24
CHD8-214ENST00000557727 HIST1H1DP16402 221 aaKnown RBP7.33□□□□□ -1.24
CHD8-214ENST00000557727 GNB3P16520 340 aa7.33□□□□□ -1.24
CHD8-214ENST00000557727 SRD5A1P18405 259 aa7.33□□□□□ -1.24
CHD8-214ENST00000557727 OMGP23515 440 aa7.33□□□□□ -1.24
CHD8-214ENST00000557727 CDK2P24941 298 aa7.33□□□□□ -1.24
CHD8-214ENST00000557727 CD34P28906 385 aa7.33□□□□□ -1.24
CHD8-214ENST00000557727 GLP1RP43220 463 aa7.33□□□□□ -1.24
CHD8-214ENST00000557727 RANBP1P43487 201 aa7.33□□□□□ -1.24
CHD8-214ENST00000557727 LOXL3P58215 753 aa7.33□□□□□ -1.24
CHD8-214ENST00000557727 DYNC1I2Q13409 638 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms