RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 PIPOXQ9P0Z9 390 aa10.46□□□□□ -0.74
SHMT2-233ENST00000557529 KIF25Q9UIL4 384 aa10.46□□□□□ -0.74
SHMT2-233ENST00000557529 FBXO9Q9UK97 447 aaPredicted RBP10.46□□□□□ -0.74
SHMT2-233ENST00000557529 NBASA2RRP1 2371 aa10.46□□□□□ -0.74
SHMT2-233ENST00000557529 IGHV3OR15-7A0A075B7D8 119 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 TEX13DA0A0J9YY54 714 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-233ENST00000557529 CRYM-AS1A6NIL9 109 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 SMLR1H3BR10 107 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 SIAH2O43255 324 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 ZG16O60844 167 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 RGS11O94810 467 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 ZNF205O95201 554 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 PLAUP00749 431 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 IFNA2P01563 188 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 RPS2P15880 293 aaKnown RBP10.45□□□□□ -0.74
SHMT2-233ENST00000557529 DNASE1P24855 282 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 PIGPP57054 158 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 SNRPD2P62316 118 aaKnown RBP10.45□□□□□ -0.74
SHMT2-233ENST00000557529 SUPT4H1P63272 117 aaKnown RBP10.45□□□□□ -0.74
SHMT2-233ENST00000557529 HOXA4Q00056 320 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-233ENST00000557529 AESQ08117 197 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 KCNJ8Q15842 424 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 C2orf68Q2NKX9 166 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 MST1LQ2TV78 715 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 KRBOX4Q5JUW0 171 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 TEX36Q5VZQ5 186 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 STUMQ69YW2 141 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 H1FOOQ8IZA3 346 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-233ENST00000557529 ZNF561Q8N587 486 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 ZNF565Q8N9K5 539 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 OR5D13Q8NGL4 314 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 OR5M8Q8NGP6 311 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 SDSLQ96GA7 329 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 COQ2Q96H96 371 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 SHARPINQ9H0F6 387 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 NCOR1P1Q9H4R4 102 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 TAF9BQ9HBM6 251 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 METRNQ9UJH8 293 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 KCNIP3Q9Y2W7 256 aa10.45□□□□□ -0.74
SHMT2-233ENST00000557529 ANKHD1Q8IWZ3 2542 aaKnown RBP10.45□□□□□ -0.74
SHMT2-233ENST00000557529 DBX1A6NMT0 343 aa10.44□□□□□ -0.74
SHMT2-233ENST00000557529 K7N7A8 449 aa10.44□□□□□ -0.74
SHMT2-233ENST00000557529 LGALS8O00214 317 aa10.44□□□□□ -0.74
SHMT2-233ENST00000557529 SNAPC5O75971 98 aa10.44□□□□□ -0.74
SHMT2-233ENST00000557529 SIX6O95475 246 aa10.44□□□□□ -0.74
SHMT2-233ENST00000557529 CYB5R3P00387 301 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-233ENST00000557529 RBMXP38159 391 aaKnown RBP10.44□□□□□ -0.74
SHMT2-233ENST00000557529 H2BFSP57053 126 aa10.44□□□□□ -0.74
SHMT2-233ENST00000557529 SRSF4Q08170 494 aaKnown RBP10.44□□□□□ -0.74
SHMT2-233ENST00000557529 SLC9A3R2Q15599 337 aa10.44□□□□□ -0.74
SHMT2-233ENST00000557529 SWI5Q1ZZU3 235 aa10.44□□□□□ -0.74
SHMT2-233ENST00000557529 KCTD9Q7L273 389 aa10.44□□□□□ -0.74
SHMT2-233ENST00000557529 MUC15Q8N387 334 aa10.44□□□□□ -0.74
SHMT2-233ENST00000557529 IL1F10Q8WWZ1 152 aa10.44□□□□□ -0.74
SHMT2-233ENST00000557529 GALMQ96C23 342 aa10.44□□□□□ -0.74
SHMT2-233ENST00000557529 GALNT14Q96FL9 552 aa10.44□□□□□ -0.74
SHMT2-233ENST00000557529 LURAP1Q96LR2 239 aa10.44□□□□□ -0.74
SHMT2-233ENST00000557529 SLC5A7Q9GZV3 580 aa10.44□□□□□ -0.74
SHMT2-233ENST00000557529 DNTTIP1Q9H147 329 aa10.44□□□□□ -0.74
SHMT2-233ENST00000557529 NAA60Q9H7X0 242 aa10.44□□□□□ -0.74
SHMT2-233ENST00000557529 SLC2A9Q9NRM0 540 aa10.44□□□□□ -0.74
SHMT2-233ENST00000557529 OPN4Q9UHM6 478 aa10.44□□□□□ -0.74
SHMT2-233ENST00000557529 OR2W1Q9Y3N9 320 aa10.44□□□□□ -0.74
SHMT2-233ENST00000557529 DIDO1Q9BTC0 2240 aaKnown RBP10.44□□□□□ -0.74
SHMT2-233ENST00000557529 CHD3Q12873 2000 aaKnown RBP10.43□□□□□ -0.74
SHMT2-233ENST00000557529 TRAV39A0A0B4J263 110 aa10.43□□□□□ -0.74
SHMT2-233ENST00000557529 TRAV38-1A0A0B4J264 116 aa10.43□□□□□ -0.74
SHMT2-233ENST00000557529 GPR31O00270 319 aa10.43□□□□□ -0.74
SHMT2-233ENST00000557529 HSPA12AO43301 675 aa10.43□□□□□ -0.74
SHMT2-233ENST00000557529 TFF1P04155 84 aa10.43□□□□□ -0.74
SHMT2-233ENST00000557529 S100GP29377 79 aa10.43□□□□□ -0.74
SHMT2-233ENST00000557529 IL2RGP31785 369 aa10.43□□□□□ -0.74
SHMT2-233ENST00000557529 GLIPR1P48060 266 aa10.43□□□□□ -0.74
SHMT2-233ENST00000557529 PPOXP50336 477 aa10.43□□□□□ -0.74
SHMT2-233ENST00000557529 RND3P61587 244 aa10.43□□□□□ -0.74
SHMT2-233ENST00000557529 LY6G6FQ5SQ64 297 aa10.43□□□□□ -0.74
SHMT2-233ENST00000557529 DCAF12L2Q5VW00 463 aa10.43□□□□□ -0.74
SHMT2-233ENST00000557529 C5orf24Q7Z6I8 188 aa10.43□□□□□ -0.74
SHMT2-233ENST00000557529 SECTM1Q8WVN6 248 aa10.43□□□□□ -0.74
SHMT2-233ENST00000557529 RTN4IP1Q8WWV3 396 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-233ENST00000557529 CNTNAP3BQ96NU0 1288 aa10.43□□□□□ -0.74
SHMT2-233ENST00000557529 VRK1Q99986 396 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-233ENST00000557529 SUCNR1Q9BXA5 334 aa10.43□□□□□ -0.74
SHMT2-233ENST00000557529 CNTNAP3Q9BZ76 1288 aa10.43□□□□□ -0.74
SHMT2-233ENST00000557529 FAM234AQ9H0X4 552 aa10.43□□□□□ -0.74
SHMT2-233ENST00000557529 ZNF665Q9H7R5 613 aa10.43□□□□□ -0.74
SHMT2-233ENST00000557529 RAB18Q9NP72 206 aa10.43□□□□□ -0.74
SHMT2-233ENST00000557529 RAB9BQ9NP90 201 aa10.43□□□□□ -0.74
SHMT2-233ENST00000557529 TMEM106BQ9NUM4 274 aa10.43□□□□□ -0.74
SHMT2-233ENST00000557529 ODAMA1E959 279 aa10.42□□□□□ -0.74
SHMT2-233ENST00000557529 NKX6-3A6NJ46 265 aa10.42□□□□□ -0.74
SHMT2-233ENST00000557529 C12orf77C9JDV5 145 aa10.42□□□□□ -0.74
SHMT2-233ENST00000557529 TMEM178BH3BS89 294 aa10.42□□□□□ -0.74
SHMT2-233ENST00000557529 SPINT2O43291 252 aa10.42□□□□□ -0.74
SHMT2-233ENST00000557529 HEXAP06865 529 aa10.42□□□□□ -0.74
SHMT2-233ENST00000557529 GZMHP20718 246 aa10.42□□□□□ -0.74
SHMT2-233ENST00000557529 GNRHRP30968 328 aa10.42□□□□□ -0.74
SHMT2-233ENST00000557529 LUMP51884 338 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-233ENST00000557529 P2RX3P56373 397 aa10.42□□□□□ -0.74
SHMT2-233ENST00000557529 FGL1Q08830 312 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms