RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 SPRY2O43597 315 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 FCGR3BO75015 233 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 CRTAPO75718 401 aaPredicted RBP4.63□□□□□ -1.67
VPS33B-207ENST00000557470 ZFPL1O95159 310 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 H2BFMP0C1H6 154 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 OCM2P0CE71 109 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 OCMP0CE72 109 aaPredicted RBP4.63□□□□□ -1.67
VPS33B-207ENST00000557470 PGA5P0DJD9 388 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 COX4I1P13073 169 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 RPA2P15927 270 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 DUSP1P28562 367 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 RRM2P31350 389 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 NUP62P37198 522 aaPredicted RBP4.63□□□□□ -1.67
VPS33B-207ENST00000557470 ACTA2P62736 377 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 RPL23AP62750 156 aaKnown RBP4.63□□□□□ -1.67
VPS33B-207ENST00000557470 ACTG2P63267 376 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 ACTC1P68032 377 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 ACTA1P68133 377 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 FAM98BQ52LJ0 330 aaKnown RBP4.63□□□□□ -1.67
VPS33B-207ENST00000557470 TMEM41BQ5BJD5 291 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 MINOS1Q5TGZ0 78 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 PLCXD3Q63HM9 321 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 GLYATQ6IB77 296 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 UNQ9370/PRO34162Q6UXP9 181 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 RASSF6Q6ZTQ3 369 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 C16orf82Q7Z2V1 217 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 ZNF329Q86UD4 541 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 TBC1D26Q86UD7 250 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.63□□□□□ -1.67
VPS33B-207ENST00000557470 AQP12AQ8IXF9 295 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 OSR2Q8N2R0 312 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 ASCC1Q8N9N2 400 aaKnown RBP4.63□□□□□ -1.67
VPS33B-207ENST00000557470 OR51D1Q8NGF3 324 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 OR5A2Q8NGI9 324 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 OR4P4Q8NGL7 312 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 OR4Q3Q8NH05 313 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 RP9Q8TA86 221 aaKnown RBP4.63□□□□□ -1.67
VPS33B-207ENST00000557470 GRPEL2Q8TAA5 225 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 GIPC3Q8TF64 312 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 BORCS5Q969J3 196 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 AKR1E2Q96JD6 320 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 OPALINQ96PE5 141 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 PRR25Q96S07 402 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 HOPXQ9BPY8 73 aaPredicted RBP4.63□□□□□ -1.67
VPS33B-207ENST00000557470 NRIP2Q9BQI9 281 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 C9orf16Q9BUW7 83 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 TSSK6Q9BXA6 273 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 PPIL3Q9H2H8 161 aaKnown RBP4.63□□□□□ -1.67
VPS33B-207ENST00000557470 ABCD2Q9UBJ2 740 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 OR14J1Q9UGF5 321 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 CEPT1Q9Y6K0 416 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 MINOS1-NBL1R4GNA1 71 aa4.63□□□□□ -1.67
VPS33B-207ENST00000557470 CSMD3Q7Z407 3707 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 LCE6AA0A183 80 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 UBE2QL1A1L167 161 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 PSMB11A5LHX3 300 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 CBY3A6NI87 242 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 OR5B21A6NL26 309 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 FAM183AA6NL82 134 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 RIIAD1A6NNX1 92 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 J3QT63 122 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 K7N7A8 449 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 NOS1APO75052 506 aaPredicted RBP4.62□□□□□ -1.67
VPS33B-207ENST00000557470 ZNF737O75373 536 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 MMP23AO75900 390 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 OR2F2O95006 317 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 NXPH2O95156 264 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 SOX14O95416 240 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 SERPINA3P01011 423 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 FABP3P05413 133 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 LYNP07948 512 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 SPP1P10451 314 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 CAPGP40121 348 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 CNN1P51911 297 aaKnown RBP4.62□□□□□ -1.67
VPS33B-207ENST00000557470 EDDM3BP56851 147 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 IL18R1Q13478 541 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 HACD2Q6Y1H2 254 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 SHFQ7M4L6 423 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 OR2W3Q7Z3T1 314 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 HAPLN4Q86UW8 402 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 COMMD2Q86X83 199 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 RNF148Q8N7C7 305 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 ZNF676Q8N7Q3 588 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 ZNF565Q8N9K5 539 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 OR2T33Q8NG76 320 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 OTOSQ8NHW6 89 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 TMEM170AQ8WVE7 144 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 CAPSLQ8WWF8 208 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 MCUR1Q96AQ8 359 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 PYURFQ96I23 114 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 ZNF714Q96N38 554 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 DUX3Q96PT4 197 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 P2RX4Q99571 388 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 SPAG8Q99932 426 aaPredicted RBP4.62□□□□□ -1.67
VPS33B-207ENST00000557470 SLC25A33Q9BSK2 321 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 GON7Q9BXV9 100 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 NIPAL2Q9H841 368 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 HES4Q9HCC6 221 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 VNN3Q9NY84 501 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 TAS2R1Q9NYW7 299 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms