RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 MEIG1Q5JSS6 88 aa7.85□□□□□ -1.15
SYNE3-205ENST00000557275 ANKRD33Q7Z3H0 272 aa7.85□□□□□ -1.15
SYNE3-205ENST00000557275 MUC20Q8N307 709 aaPredicted RBP7.85□□□□□ -1.15
SYNE3-205ENST00000557275 SIRT6Q8N6T7 355 aa7.85□□□□□ -1.15
SYNE3-205ENST00000557275 TREM2Q9NZC2 230 aa7.85□□□□□ -1.15
SYNE3-205ENST00000557275 DPTQ07507 201 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 CLEC18BQ6UXF7 455 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 OR6X1Q8NH79 312 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 WRAP73Q9P2S5 460 aaPredicted RBP7.84□□□□□ -1.15
SYNE3-205ENST00000557275 KDM3BQ7LBC6 1761 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 TMEM50AO95807 157 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 COX20Q5RI15 118 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 Q6AWC8 147 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 OR4C13Q8NGP0 309 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 R3HDM4Q96D70 268 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 MDP1Q86V88 176 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 OR5M9Q8NGP3 310 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 OR2Z1Q8NG97 314 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 ABHD1Q96SE0 405 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 PLPP1O14494 284 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 MC5RP33032 325 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 OR4A5Q8NH83 315 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 SIGLEC11Q96RL6 698 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 VN1R1Q9GZP7 353 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 METTL1Q9UBP6 276 aaKnown RBP7.84□□□□□ -1.15
SYNE3-205ENST00000557275 TMEM189A5PLL7 270 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 ANK1P16157 1881 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 A1L4Q6 167 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 NRG2O14511 850 aaPredicted RBP7.84□□□□□ -1.15
SYNE3-205ENST00000557275 CD74P04233 296 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 FAM209BQ5JX69 171 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 IBA57Q5T440 356 aaKnown RBP7.84□□□□□ -1.15
SYNE3-205ENST00000557275 WFDC8Q8IUA0 241 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 C7orf66A4D0T2 115 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 HSPB1P04792 205 aaKnown RBP7.84□□□□□ -1.15
SYNE3-205ENST00000557275 CLEC2LP0C7M8 214 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 WDTC1Q8N5D0 677 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 WNT5BQ9H1J7 359 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 SIRT5Q9NXA8 310 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 TMEM56-RWDD3S4R434 201 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 KLF16Q9BXK1 252 aaPredicted RBP7.84□□□□□ -1.15
SYNE3-205ENST00000557275 CLEC5AQ9NY25 188 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 GLI4P10075 376 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 PI3P19957 117 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 LRRC75AQ8NAA5 344 aa7.84□□□□□ -1.15
SYNE3-205ENST00000557275 MBLAC1A4D2B0 266 aaPredicted RBP7.84□□□□□ -1.16
SYNE3-205ENST00000557275 LAMTOR1Q6IAA8 161 aa7.84□□□□□ -1.16
SYNE3-205ENST00000557275 MRGPRX1Q96LB2 322 aa7.84□□□□□ -1.16
SYNE3-205ENST00000557275 HEXA-AS1Q9H8Q6 139 aa7.84□□□□□ -1.16
SYNE3-205ENST00000557275 ERRFI1Q9UJM3 462 aaPredicted RBP7.84□□□□□ -1.16
SYNE3-205ENST00000557275 ONECUT2O95948 504 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 RPS4XP62701 263 aaKnown RBP7.83□□□□□ -1.16
SYNE3-205ENST00000557275 TM4SF20Q53R12 229 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 MSL2Q9HCI7 577 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 DLX6P56179 175 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 ZNF77Q15935 545 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 DSPPQ9NZW4 1301 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 BHLHA15Q7RTS1 189 aaPredicted RBP7.83□□□□□ -1.16
SYNE3-205ENST00000557275 OR1P1Q8NH06 330 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 HSPB9Q9BQS6 159 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 SSBP4Q9BWG4 385 aaPredicted RBP7.83□□□□□ -1.16
SYNE3-205ENST00000557275 PYCR3Q53H96 274 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 TMEM99Q8N816 258 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 GNRHR2Q96P88 292 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 CBLN4Q9NTU7 201 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 NEU3Q9UQ49 428 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 LEUTXA8MZ59 168 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 SRD5A2P31213 254 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 OR8B2Q96RD0 313 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 DMRTA2Q96SC8 542 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 TMUB1Q9BVT8 246 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 CNTD2Q9H8S5 307 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 TRAV39A0A0B4J263 110 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 Q6ZPB1 254 aaPredicted RBP7.83□□□□□ -1.16
SYNE3-205ENST00000557275 LINC00696Q6ZRV3 163 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 RBM45Q8IUH3 476 aaKnown RBP7.83□□□□□ -1.16
SYNE3-205ENST00000557275 ZNF740Q8NDX6 193 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 RGPD2P0DJD1 1756 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 TIMP1P01033 207 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 LRTM2Q8N967 370 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 OR2V1Q8NHB1 315 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 DOK4Q8TEW6 326 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 ATOH1Q92858 354 aaPredicted RBP7.83□□□□□ -1.16
SYNE3-205ENST00000557275 CLDN16Q9Y5I7 305 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 CACNA1AO00555 2505 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 TRGC2P03986 189 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 NUTF2P61970 127 aaKnown RBP7.83□□□□□ -1.16
SYNE3-205ENST00000557275 NCMAPQ5T1S8 102 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 ADAMTS5Q9UNA0 930 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 SIT1Q9Y3P8 196 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 SPCS1Q9Y6A9 102 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 CCL11P51671 97 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 MRPL54Q6P161 138 aaKnown RBP7.83□□□□□ -1.16
SYNE3-205ENST00000557275 FLYWCH2Q96CP2 140 aaKnown RBP7.83□□□□□ -1.16
SYNE3-205ENST00000557275 ASCL3Q9NQ33 180 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 LRP12Q9Y561 859 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 FAM208BQ5VWN6 2430 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 CICQ96RK0 1608 aaPredicted RBP7.83□□□□□ -1.16
SYNE3-205ENST00000557275 FAM181BA6NEQ2 426 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 CD27P26842 260 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms