RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 FGF12P61328 243 aa13.13□□□□□ -0.31
TMEM55B-207ENST00000557041 HIST1H3AP68431 136 aa13.13□□□□□ -0.31
TMEM55B-207ENST00000557041 EIF3IQ13347 325 aaKnown RBP13.13□□□□□ -0.31
TMEM55B-207ENST00000557041 HIST2H3PS2Q5TEC6 136 aa13.13□□□□□ -0.31
TMEM55B-207ENST00000557041 PRAMEF6Q5VXH4 476 aa13.13□□□□□ -0.31
TMEM55B-207ENST00000557041 HIST2H3AQ71DI3 136 aa13.13□□□□□ -0.31
TMEM55B-207ENST00000557041 THNSL2Q86YJ6 484 aa13.13□□□□□ -0.31
TMEM55B-207ENST00000557041 TAAR5O14804 337 aa13.13□□□□□ -0.31
TMEM55B-207ENST00000557041 WNT9BO14905 357 aa13.13□□□□□ -0.31
TMEM55B-207ENST00000557041 CLDN1O95832 211 aa13.13□□□□□ -0.31
TMEM55B-207ENST00000557041 PSG2P11465 335 aa13.13□□□□□ -0.31
TMEM55B-207ENST00000557041 TDGF1P13385 188 aa13.13□□□□□ -0.31
TMEM55B-207ENST00000557041 TMEM211Q6ICI0 200 aa13.13□□□□□ -0.31
TMEM55B-207ENST00000557041 FIP1L1Q6UN15 594 aaKnown RBP13.13□□□□□ -0.31
TMEM55B-207ENST00000557041 LCN15Q6UWW0 184 aa13.13□□□□□ -0.31
TMEM55B-207ENST00000557041 MMP26Q9NRE1 261 aa13.13□□□□□ -0.31
TMEM55B-207ENST00000557041 HSF4Q9ULV5 492 aa13.13□□□□□ -0.31
TMEM55B-207ENST00000557041 METTL15P1P0C7V9 234 aa13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 HLA-GP17693 338 aa13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 OR8B8Q15620 311 aa13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 BTNL3Q6UXE8 466 aa13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 AQP10Q96PS8 301 aa13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 PRDM14Q9GZV8 571 aa13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 LOC105371267A0A1B0GV96 52 aa13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 RAC2P15153 192 aa13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 F2RL1P55085 397 aa13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 MRGPRDQ8TDS7 321 aa13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 MOB3AQ96BX8 217 aa13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 CYTL1Q9NRR1 136 aa13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 CACNG5Q9UF02 275 aa13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 SMCO3A2RU48 225 aa13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 ZFP92A6NM28 416 aa13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 TXNL1O43396 289 aa13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 RPS2P15880 293 aaKnown RBP13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 OR3A1P47881 315 aa13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 AESQ08117 197 aa13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 ADAM5Q6NVV9 412 aa13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 OR5A2Q8NGI9 324 aa13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 SPRR3Q9UBC9 169 aa13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 TMED3Q9Y3Q3 217 aa13.12□□□□□ -0.31
TMEM55B-207ENST00000557041 TRDCB7Z8K6 153 aa13.11□□□□□ -0.31
TMEM55B-207ENST00000557041 H0YL77 283 aa13.11□□□□□ -0.31
TMEM55B-207ENST00000557041 WNT5AP41221 380 aa13.11□□□□□ -0.31
TMEM55B-207ENST00000557041 ZNF83P51522 516 aa13.11□□□□□ -0.31
TMEM55B-207ENST00000557041 CRIP3Q6Q6R5 217 aa13.11□□□□□ -0.31
TMEM55B-207ENST00000557041 CLRN3Q8NCR9 226 aa13.11□□□□□ -0.31
TMEM55B-207ENST00000557041 DMXL1Q9Y485 3027 aa13.11□□□□□ -0.31
TMEM55B-207ENST00000557041 LAMA5O15230 3695 aa13.11□□□□□ -0.31
TMEM55B-207ENST00000557041 ALDH3B1P43353 468 aa13.11□□□□□ -0.31
TMEM55B-207ENST00000557041 EWSR1Q01844 656 aaKnown RBP eCLIP13.11□□□□□ -0.31
TMEM55B-207ENST00000557041 VWA1Q6PCB0 445 aa13.11□□□□□ -0.31
TMEM55B-207ENST00000557041 LDLRAD3Q86YD5 345 aa13.11□□□□□ -0.31
TMEM55B-207ENST00000557041 POM121L2Q96KW2 1035 aa13.11□□□□□ -0.31
TMEM55B-207ENST00000557041 GNG12Q9UBI6 72 aa13.11□□□□□ -0.31
TMEM55B-207ENST00000557041 COL4A2P08572 1712 aa13.11□□□□□ -0.31
TMEM55B-207ENST00000557041 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.11□□□□□ -0.31
TMEM55B-207ENST00000557041 GPR137BO60478 399 aa13.11□□□□□ -0.31
TMEM55B-207ENST00000557041 ARG1P05089 322 aa13.11□□□□□ -0.31
TMEM55B-207ENST00000557041 DYNLT3P51808 116 aa13.11□□□□□ -0.31
TMEM55B-207ENST00000557041 OR2B8PP59922 312 aa13.11□□□□□ -0.31
TMEM55B-207ENST00000557041 GUK1Q16774 197 aa13.11□□□□□ -0.31
TMEM55B-207ENST00000557041 DLL3Q9NYJ7 618 aa13.11□□□□□ -0.31
TMEM55B-207ENST00000557041 FTH1P19P0C7X4 201 aa13.1□□□□□ -0.31
TMEM55B-207ENST00000557041 ZNF14P17017 642 aaPredicted RBP13.1□□□□□ -0.31
TMEM55B-207ENST00000557041 RPL23AP62750 156 aaKnown RBP13.1□□□□□ -0.31
TMEM55B-207ENST00000557041 C20orf204Q6ZNR8 217 aa13.1□□□□□ -0.31
TMEM55B-207ENST00000557041 OR2Z1Q8NG97 314 aa13.1□□□□□ -0.31
TMEM55B-207ENST00000557041 OR4A4PQ8NGN8 299 aa13.1□□□□□ -0.31
TMEM55B-207ENST00000557041 ABHD14AQ9BUJ0 271 aa13.1□□□□□ -0.31
TMEM55B-207ENST00000557041 SLC25A31Q9H0C2 315 aa13.1□□□□□ -0.31
TMEM55B-207ENST00000557041 ZFP57Q9NU63 452 aa13.1□□□□□ -0.31
TMEM55B-207ENST00000557041 ANKRD11Q6UB99 2663 aaPredicted RBP13.1□□□□□ -0.31
TMEM55B-207ENST00000557041 UMAD1C9J7I0 102 aa13.1□□□□□ -0.31
TMEM55B-207ENST00000557041 SH2D1BO14796 132 aa13.1□□□□□ -0.31
TMEM55B-207ENST00000557041 SOHLH1Q5JUK2 328 aa13.1□□□□□ -0.31
TMEM55B-207ENST00000557041 MARVELD3Q96A59 401 aa13.1□□□□□ -0.31
TMEM55B-207ENST00000557041 IP6K3Q96PC2 410 aa13.1□□□□□ -0.31
TMEM55B-207ENST00000557041 FAM117AQ9C073 453 aa13.1□□□□□ -0.31
TMEM55B-207ENST00000557041 C19orf12Q9NSK7 152 aa13.1□□□□□ -0.31
TMEM55B-207ENST00000557041 NCOR2Q9Y618 2525 aa13.1□□□□□ -0.31
TMEM55B-207ENST00000557041 WNK2Q9Y3S1 2297 aa13.1□□□□□ -0.31
TMEM55B-207ENST00000557041 IL18BPO95998 194 aa13.09□□□□□ -0.31
TMEM55B-207ENST00000557041 MPZP25189 248 aa13.09□□□□□ -0.31
TMEM55B-207ENST00000557041 FOXL2NBQ6ZUU3 175 aa13.09□□□□□ -0.31
TMEM55B-207ENST00000557041 RXFP4Q8TDU9 374 aa13.09□□□□□ -0.31
TMEM55B-207ENST00000557041 TCTEX1D2Q8WW35 142 aa13.09□□□□□ -0.31
TMEM55B-207ENST00000557041 PLK3Q9H4B4 646 aa13.09□□□□□ -0.31
TMEM55B-207ENST00000557041 Q9N2K0 584 aa13.09□□□□□ -0.31
TMEM55B-207ENST00000557041 AUP1Q9Y679 476 aa13.09□□□□□ -0.31
TMEM55B-207ENST00000557041 RAB19A4D1S5 217 aa13.09□□□□□ -0.31
TMEM55B-207ENST00000557041 CDK2AP1O14519 115 aa13.09□□□□□ -0.31
TMEM55B-207ENST00000557041 PPP1CCP36873 323 aaKnown RBP13.09□□□□□ -0.31
TMEM55B-207ENST00000557041 FAM53AQ6NSI3 398 aaPredicted RBP13.09□□□□□ -0.31
TMEM55B-207ENST00000557041 NRIP2Q9BQI9 281 aa13.09□□□□□ -0.31
TMEM55B-207ENST00000557041 PBDC1Q9BVG4 233 aa13.09□□□□□ -0.31
TMEM55B-207ENST00000557041 TMEM100Q9NV29 134 aa13.09□□□□□ -0.31
TMEM55B-207ENST00000557041 M0R1B8 84 aa13.09□□□□□ -0.31
TMEM55B-207ENST00000557041 OR2H2O95918 312 aa13.09□□□□□ -0.31
TMEM55B-207ENST00000557041 H2AFB1P0C5Y9 115 aa13.09□□□□□ -0.31
TMEM55B-207ENST00000557041 ZNF266Q14584 549 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms