RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 CXorf66Q5JRM2 361 aaPredicted RBP14.35□□□□□ -0.11
VIPAS39-209ENST00000556909 SATL1Q86VE3 508 aa14.35□□□□□ -0.11
VIPAS39-209ENST00000556909 Q8N9W7 124 aa14.35□□□□□ -0.11
VIPAS39-209ENST00000556909 OR5M8Q8NGP6 311 aa14.35□□□□□ -0.11
VIPAS39-209ENST00000556909 OR2T10Q8NGZ9 312 aa14.35□□□□□ -0.11
VIPAS39-209ENST00000556909 GON7Q9BXV9 100 aa14.35□□□□□ -0.11
VIPAS39-209ENST00000556909 FAM118AQ9NWS6 357 aa14.35□□□□□ -0.11
VIPAS39-209ENST00000556909 EI24O14681 340 aa14.34□□□□□ -0.11
VIPAS39-209ENST00000556909 MAGEB3O15480 346 aa14.34□□□□□ -0.11
VIPAS39-209ENST00000556909 HTR3BO95264 441 aa14.34□□□□□ -0.11
VIPAS39-209ENST00000556909 CDX1P47902 265 aaPredicted RBP14.34□□□□□ -0.11
VIPAS39-209ENST00000556909 FOXE3Q13461 319 aa14.34□□□□□ -0.11
VIPAS39-209ENST00000556909 C9orf66Q5T8R8 295 aa14.34□□□□□ -0.11
VIPAS39-209ENST00000556909 ASCL4Q6XD76 172 aa14.34□□□□□ -0.11
VIPAS39-209ENST00000556909 LINC00311Q8N616 119 aa14.34□□□□□ -0.11
VIPAS39-209ENST00000556909 RNF152Q8N8N0 203 aa14.34□□□□□ -0.11
VIPAS39-209ENST00000556909 TMEM104Q8NE00 496 aa14.34□□□□□ -0.11
VIPAS39-209ENST00000556909 MYCBPQ99417 103 aaPredicted RBP14.34□□□□□ -0.11
VIPAS39-209ENST00000556909 IFT22Q9H7X7 185 aa14.34□□□□□ -0.11
VIPAS39-209ENST00000556909 TAS2R4Q9NYW5 299 aa14.34□□□□□ -0.11
VIPAS39-209ENST00000556909 ORC6Q9Y5N6 252 aa14.34□□□□□ -0.11
VIPAS39-209ENST00000556909 DNAH7Q8WXX0 4024 aa14.33□□□□□ -0.11
VIPAS39-209ENST00000556909 TMEM30CPA0ZSE6 113 aa14.33□□□□□ -0.12
VIPAS39-209ENST00000556909 C15orf65H3BRN8 121 aa14.33□□□□□ -0.12
VIPAS39-209ENST00000556909 MPZL2O60487 215 aa14.33□□□□□ -0.12
VIPAS39-209ENST00000556909 OR7C1O76099 320 aaPredicted RBP14.33□□□□□ -0.12
VIPAS39-209ENST00000556909 GABRB1P18505 474 aa14.33□□□□□ -0.12
VIPAS39-209ENST00000556909 RBM11P57052 281 aaKnown RBP14.33□□□□□ -0.12
VIPAS39-209ENST00000556909 CFHR3Q02985 330 aa14.33□□□□□ -0.12
VIPAS39-209ENST00000556909 MRPL28Q13084 256 aaKnown RBP14.33□□□□□ -0.12
VIPAS39-209ENST00000556909 KIR2DS1Q14954 304 aa14.33□□□□□ -0.12
VIPAS39-209ENST00000556909 ZIK1Q3SY52 487 aaPredicted RBP14.33□□□□□ -0.12
VIPAS39-209ENST00000556909 FAM53AQ6NSI3 398 aaPredicted RBP14.33□□□□□ -0.12
VIPAS39-209ENST00000556909 UBALD1Q8TB05 177 aa14.33□□□□□ -0.12
VIPAS39-209ENST00000556909 RTN4IP1Q8WWV3 396 aaPredicted RBP14.33□□□□□ -0.12
VIPAS39-209ENST00000556909 RGP1Q92546 391 aaPredicted RBP14.33□□□□□ -0.12
VIPAS39-209ENST00000556909 JAM3Q9BX67 310 aa14.33□□□□□ -0.12
VIPAS39-209ENST00000556909 PLSCR3Q9NRY6 295 aa14.33□□□□□ -0.12
VIPAS39-209ENST00000556909 ERVK13-1Q9NX77 482 aa14.33□□□□□ -0.12
VIPAS39-209ENST00000556909 ST3GAL6Q9Y274 331 aa14.33□□□□□ -0.12
VIPAS39-209ENST00000556909 SEC14L6B5MCN3 397 aa14.32□□□□□ -0.12
VIPAS39-209ENST00000556909 SDCBPO00560 298 aaPredicted RBP14.32□□□□□ -0.12
VIPAS39-209ENST00000556909 CDRT1O95170 752 aa14.32□□□□□ -0.12
VIPAS39-209ENST00000556909 ELANEP08246 267 aa14.32□□□□□ -0.12
VIPAS39-209ENST00000556909 GZMHP20718 246 aa14.32□□□□□ -0.12
VIPAS39-209ENST00000556909 ECI1P42126 302 aa14.32□□□□□ -0.12
VIPAS39-209ENST00000556909 SOX2P48431 317 aa14.32□□□□□ -0.12
VIPAS39-209ENST00000556909 RASSF2P50749 326 aa14.32□□□□□ -0.12
VIPAS39-209ENST00000556909 NHLRC3Q5JS37 347 aa14.32□□□□□ -0.12
VIPAS39-209ENST00000556909 C8orf31Q8N9H6 132 aa14.32□□□□□ -0.12
VIPAS39-209ENST00000556909 OR52M1Q8NGK5 317 aa14.32□□□□□ -0.12
VIPAS39-209ENST00000556909 ARL11Q969Q4 196 aa14.32□□□□□ -0.12
VIPAS39-209ENST00000556909 ST6GALNAC6Q969X2 333 aa14.32□□□□□ -0.12
VIPAS39-209ENST00000556909 S1PR3Q99500 378 aa14.32□□□□□ -0.12
VIPAS39-209ENST00000556909 HSPB9Q9BQS6 159 aa14.32□□□□□ -0.12
VIPAS39-209ENST00000556909 GFOD1Q9NXC2 390 aa14.32□□□□□ -0.12
VIPAS39-209ENST00000556909 IL36GQ9NZH8 169 aa14.32□□□□□ -0.12
VIPAS39-209ENST00000556909 SORL1Q92673 2214 aa14.31□□□□□ -0.12
VIPAS39-209ENST00000556909 ZNF736B4DX44 427 aaPredicted RBP14.31□□□□□ -0.12
VIPAS39-209ENST00000556909 GEMIN2O14893 280 aaKnown RBP14.31□□□□□ -0.12
VIPAS39-209ENST00000556909 RRP9O43818 475 aaKnown RBP14.31□□□□□ -0.12
VIPAS39-209ENST00000556909 FADS2O95864 444 aaKnown RBP14.31□□□□□ -0.12
VIPAS39-209ENST00000556909 MOSP00540 346 aa14.31□□□□□ -0.12
VIPAS39-209ENST00000556909 CD1BP29016 333 aa14.31□□□□□ -0.12
VIPAS39-209ENST00000556909 ALDH3A2P51648 485 aa14.31□□□□□ -0.12
VIPAS39-209ENST00000556909 GBX2P52951 348 aaPredicted RBP14.31□□□□□ -0.12
VIPAS39-209ENST00000556909 FHL3Q13643 280 aa14.31□□□□□ -0.12
VIPAS39-209ENST00000556909 FAM71E2Q8N5Q1 922 aa14.31□□□□□ -0.12
VIPAS39-209ENST00000556909 OR52N1Q8NH53 320 aa14.31□□□□□ -0.12
VIPAS39-209ENST00000556909 C4orf3Q8WVX3 66 aa14.31□□□□□ -0.12
VIPAS39-209ENST00000556909 PYDC1Q8WXC3 89 aa14.31□□□□□ -0.12
VIPAS39-209ENST00000556909 SCOCQ9UIL1 159 aa14.31□□□□□ -0.12
VIPAS39-209ENST00000556909 IGHV3-43A0A0B4J1X8 118 aa14.3□□□□□ -0.12
VIPAS39-209ENST00000556909 SLC31A2O15432 143 aa14.3□□□□□ -0.12
VIPAS39-209ENST00000556909 IGHG4P01861 327 aa14.3□□□□□ -0.12
VIPAS39-209ENST00000556909 IGHV3-43DP0DP04 118 aa14.3□□□□□ -0.12
VIPAS39-209ENST00000556909 IL3RAP26951 378 aa14.3□□□□□ -0.12
VIPAS39-209ENST00000556909 GTF2A1P52655 376 aaPredicted RBP14.3□□□□□ -0.12
VIPAS39-209ENST00000556909 LINC00596Q86U02 117 aa14.3□□□□□ -0.12
VIPAS39-209ENST00000556909 CCDC107Q8WV48 283 aa14.3□□□□□ -0.12
VIPAS39-209ENST00000556909 RBMXL1Q96E39 390 aaKnown RBP14.3□□□□□ -0.12
VIPAS39-209ENST00000556909 ASCL2Q99929 193 aa14.3□□□□□ -0.12
VIPAS39-209ENST00000556909 RASL11BQ9BPW5 248 aa14.3□□□□□ -0.12
VIPAS39-209ENST00000556909 METTL9Q9H1A3 318 aa14.3□□□□□ -0.12
VIPAS39-209ENST00000556909 AMBNQ9NP70 447 aa14.3□□□□□ -0.12
VIPAS39-209ENST00000556909 ING4Q9UNL4 249 aa14.3□□□□□ -0.12
VIPAS39-209ENST00000556909 GMPPBQ9Y5P6 360 aa14.3□□□□□ -0.12
VIPAS39-209ENST00000556909 ORC5O43913 435 aa14.29□□□□□ -0.12
VIPAS39-209ENST00000556909 CIB2O75838 187 aa14.29□□□□□ -0.12
VIPAS39-209ENST00000556909 CD2P06729 351 aa14.29□□□□□ -0.12
VIPAS39-209ENST00000556909 SERPINA2P20848 420 aa14.29□□□□□ -0.12
VIPAS39-209ENST00000556909 VDAC1P21796 283 aa14.29□□□□□ -0.12
VIPAS39-209ENST00000556909 PSMB8P28062 276 aa14.29□□□□□ -0.12
VIPAS39-209ENST00000556909 RAB40BQ12829 278 aa14.29□□□□□ -0.12
VIPAS39-209ENST00000556909 MPV17LQ2QL34 196 aa14.29□□□□□ -0.12
VIPAS39-209ENST00000556909 KLHL22Q53GT1 634 aa14.29□□□□□ -0.12
VIPAS39-209ENST00000556909 DDI2Q5TDH0 399 aa14.29□□□□□ -0.12
VIPAS39-209ENST00000556909 OR8H1Q8NGG4 311 aa14.29□□□□□ -0.12
VIPAS39-209ENST00000556909 OR52I1Q8NGK6 324 aa14.29□□□□□ -0.12
VIPAS39-209ENST00000556909 GPR148Q8TDV2 347 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms