RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 C1orf174Q8IYL3 243 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 Q8NFD4 153 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 OR51F2Q8NH61 342 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 OR2V1Q8NHB1 315 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 LILRB1Q8NHL6 650 aaPredicted RBP5.25□□□□□ -1.57
CPSF2-205ENST00000556622 LYPD6BQ8NI32 183 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 FAM216AQ8WUB2 273 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 PCNPQ8WW12 178 aaKnown RBP5.25□□□□□ -1.57
CPSF2-205ENST00000556622 SPSB4Q96A44 273 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 TMEM230Q96A57 120 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 APOBEC3DQ96AK3 386 aaPredicted RBP5.25□□□□□ -1.57
CPSF2-205ENST00000556622 SGK3Q96BR1 496 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 MOB3AQ96BX8 217 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 ZNF524Q96C55 264 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 CMBLQ96DG6 245 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 AKR1E2Q96JD6 320 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 JSRP1Q96MG2 331 aaPredicted RBP5.25□□□□□ -1.57
CPSF2-205ENST00000556622 ZNF75AQ96N20 296 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 NRIP2Q9BQI9 281 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 GINS3Q9BRX5 216 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 SLC35B3Q9H1N7 401 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 ARV1Q9H2C2 271 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 HIPK2Q9H2X6 1198 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 HRH4Q9H3N8 390 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 ZNF442Q9H7R0 627 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 OR2S2Q9NQN1 319 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 CYTL1Q9NRR1 136 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 P4HTMQ9NXG6 502 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 RCC2Q9P258 522 aaKnown RBP5.25□□□□□ -1.57
CPSF2-205ENST00000556622 MCTS1Q9ULC4 181 aaKnown RBP5.25□□□□□ -1.57
CPSF2-205ENST00000556622 ST3GAL6Q9Y274 331 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 STARD10Q9Y365 291 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 UBE2J1Q9Y385 318 aaPredicted RBP5.25□□□□□ -1.57
CPSF2-205ENST00000556622 MPC1Q9Y5U8 109 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 ZFHX4Q86UP3 3567 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 CPAMD8Q8IZJ3 1885 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 ATRXP46100 2492 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 COL6A6A6NMZ7 2263 aa5.25□□□□□ -1.57
CPSF2-205ENST00000556622 CNTRLQ7Z7A1 2325 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 IGKV1D-43A0A0B4J1Z2 117 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 IGKV1-9A0A0C4DH69 117 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 C3orf85A0A1B0GTC6 90 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 OR5B21A6NL26 309 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 ANKRD30BLA7E2S9 258 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 DIRC3C9JPN6 131 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 ZNF587BE7ETH6 402 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 TRAPPC2LH3BP13 241 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 RPL36A-HNRNPH2H7BZ11 118 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 GPR31O00270 319 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 SYNGR3O43761 229 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 LMX1BO60663 402 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 CYTIPO60759 359 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 NDUFS6O75380 124 aaKnown RBP5.24□□□□□ -1.57
CPSF2-205ENST00000556622 IFNA1P01562 189 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 IFNA5P01569 189 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 UMODP07911 640 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 FCGR3AP08637 254 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 WNT2P09544 360 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 SFTA3P0C7M3 94 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 OR8U9P0C7N5 309 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 SPP1P10451 314 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 COX6A1P12074 109 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 VDAC1P21796 283 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 CRYGSP22914 178 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 CHATP28329 748 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 NKX2-1P43699 371 aaPredicted RBP5.24□□□□□ -1.57
CPSF2-205ENST00000556622 FOXL2P58012 376 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 SUPT4H1P63272 117 aaKnown RBP5.24□□□□□ -1.57
CPSF2-205ENST00000556622 HBG1P69891 147 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 HBG2P69892 147 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 MZT1Q08AG7 82 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 ANKRD55Q3KP44 614 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 ACSF3Q4G176 576 aaPredicted RBP5.24□□□□□ -1.57
CPSF2-205ENST00000556622 FAM74A1Q5RGS3 127 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 GGNBP1Q5YKI7 109 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 PLCXD3Q63HM9 321 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 BTNL8Q6UX41 500 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 MRPL21Q7Z2W9 205 aaKnown RBP5.24□□□□□ -1.57
CPSF2-205ENST00000556622 STX12Q86Y82 276 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 MCEMP1Q8IX19 187 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 PUSL1Q8N0Z8 303 aaKnown RBP5.24□□□□□ -1.57
CPSF2-205ENST00000556622 TCTEX1D1Q8N7M0 179 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 OR5A2Q8NGI9 324 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 GLYATL2Q8WU03 294 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 NABP1Q96AH0 204 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 MRGPRFQ96AM1 343 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 DNAJA3Q96EY1 480 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 BTF3L4Q96K17 158 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 RAB40CQ96S21 281 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 NKX3-1Q99801 234 aaPredicted RBP5.24□□□□□ -1.57
CPSF2-205ENST00000556622 FAM173AQ9BQD7 235 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 C1QTNF5Q9BXJ0 243 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 OR2H1Q9GZK4 316 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 EIF5A2Q9GZV4 153 aaKnown RBP5.24□□□□□ -1.57
CPSF2-205ENST00000556622 KCNK15Q9H427 330 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 CRLF2Q9HC73 371 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 SH2D2AQ9NP31 389 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 SLC2A9Q9NRM0 540 aa5.24□□□□□ -1.57
CPSF2-205ENST00000556622 TREM2Q9NZC2 230 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms