RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 TMEM229AB2RXF0 380 aa14.98□□□□□ -0.01
PTPN21-208ENST00000556564 DOLPP1Q86YN1 238 aa14.98□□□□□ -0.01
PTPN21-208ENST00000556564 NECAP1Q8NC96 275 aa14.98□□□□□ -0.01
PTPN21-208ENST00000556564 OR4A4PQ8NGN8 299 aa14.98□□□□□ -0.01
PTPN21-208ENST00000556564 FAM24AA6NFZ4 105 aa14.98□□□□□ -0.01
PTPN21-208ENST00000556564 SYNGR3O43761 229 aa14.98□□□□□ -0.01
PTPN21-208ENST00000556564 SRSF6Q13247 344 aaKnown RBP14.98□□□□□ -0.01
PTPN21-208ENST00000556564 RIPPLY2Q5TAB7 128 aa14.98□□□□□ -0.01
PTPN21-208ENST00000556564 C11orf87Q6NUJ2 197 aa14.98□□□□□ -0.01
PTPN21-208ENST00000556564 TICRRQ7Z2Z1 1910 aa14.98□□□□□ -0.01
PTPN21-208ENST00000556564 CTRB1P17538 263 aa14.98□□□□□ -0.01
PTPN21-208ENST00000556564 APOBEC3AP31941 199 aaPredicted RBP14.98□□□□□ -0.01
PTPN21-208ENST00000556564 CTRB2Q6GPI1 263 aa14.98□□□□□ -0.01
PTPN21-208ENST00000556564 HIST2H3AQ71DI3 136 aa14.98□□□□□ -0.01
PTPN21-208ENST00000556564 ABHD14AQ9BUJ0 271 aa14.98□□□□□ -0.01
PTPN21-208ENST00000556564 OR2W1Q9Y3N9 320 aa14.98□□□□□ -0.01
PTPN21-208ENST00000556564 URGCP-MRPS24S4R325 110 aa14.98□□□□□ -0.01
PTPN21-208ENST00000556564 IGHV3-21A0A0B4J1V1 117 aa14.97□□□□□ -0.01
PTPN21-208ENST00000556564 K7N7A8 449 aa14.97□□□□□ -0.01
PTPN21-208ENST00000556564 CCDC144NLQ6NUI1 221 aa14.97□□□□□ -0.01
PTPN21-208ENST00000556564 IRF3Q14653 427 aa14.97□□□□□ -0.01
PTPN21-208ENST00000556564 RXFP4Q8TDU9 374 aa14.97□□□□□ -0.01
PTPN21-208ENST00000556564 RAB40CQ96S21 281 aa14.97□□□□□ -0.01
PTPN21-208ENST00000556564 PINLYPA6NC86 204 aa14.97□□□□□ -0.01
PTPN21-208ENST00000556564 TXNL1O43396 289 aa14.97□□□□□ -0.01
PTPN21-208ENST00000556564 CTSDP07339 412 aaPredicted RBP14.97□□□□□ -0.01
PTPN21-208ENST00000556564 RAB32Q13637 225 aa14.97□□□□□ -0.01
PTPN21-208ENST00000556564 TIMM23BQ5SRD1 257 aa14.97□□□□□ -0.01
PTPN21-208ENST00000556564 ZNF596Q8TC21 504 aa14.97□□□□□ -0.01
PTPN21-208ENST00000556564 MITD1Q8WV92 249 aa14.97□□□□□ -0.01
PTPN21-208ENST00000556564 RBPMSQ93062 196 aaKnown RBP14.97□□□□□ -0.01
PTPN21-208ENST00000556564 B9A039 149 aa14.97□□□□□ -0.01
PTPN21-208ENST00000556564 TRAPPC2P0DI81 140 aa14.97□□□□□ -0.01
PTPN21-208ENST00000556564 TRAPPC2BP0DI82 140 aa14.97□□□□□ -0.01
PTPN21-208ENST00000556564 FGF12P61328 243 aa14.97□□□□□ -0.01
PTPN21-208ENST00000556564 RHOBP62745 196 aa14.97□□□□□ -0.01
PTPN21-208ENST00000556564 TMEM45BQ96B21 275 aa14.97□□□□□ -0.01
PTPN21-208ENST00000556564 DEPPQ9NTK1 212 aa14.97□□□□□ -0.01
PTPN21-208ENST00000556564 MGST3O14880 152 aa14.96□□□□□ -0.01
PTPN21-208ENST00000556564 TIGITQ495A1 244 aa14.96□□□□□ -0.01
PTPN21-208ENST00000556564 ST8SIA2Q92186 375 aa14.96□□□□□ -0.01
PTPN21-208ENST00000556564 SIRT7Q9NRC8 400 aa14.96□□□□□ -0.01
PTPN21-208ENST00000556564 MRPS18AQ9NVS2 196 aaKnown RBP14.96□□□□□ -0.01
PTPN21-208ENST00000556564 FAM206AQ9NX38 181 aa14.96□□□□□ -0.01
PTPN21-208ENST00000556564 LOC102723996A0A087X1L8 192 aa14.96□□□□□ -0.01
PTPN21-208ENST00000556564 KLF7O75840 302 aaPredicted RBP14.96□□□□□ -0.01
PTPN21-208ENST00000556564 LY86O95711 162 aa14.96□□□□□ -0.01
PTPN21-208ENST00000556564 TBX6O95947 436 aaPredicted RBP14.96□□□□□ -0.01
PTPN21-208ENST00000556564 HBZP02008 142 aa14.96□□□□□ -0.01
PTPN21-208ENST00000556564 LY6EQ16553 131 aa14.96□□□□□ -0.01
PTPN21-208ENST00000556564 OR5C1Q8NGR4 320 aa14.96□□□□□ -0.01
PTPN21-208ENST00000556564 TUBG2Q9NRH3 451 aa14.96□□□□□ -0.01
PTPN21-208ENST00000556564 LRRC3CA6NJW4 275 aa14.96□□□□□ -0.02
PTPN21-208ENST00000556564 HAX1O00165 279 aa14.96□□□□□ -0.02
PTPN21-208ENST00000556564 CD40P25942 277 aa14.96□□□□□ -0.02
PTPN21-208ENST00000556564 ERVS71-1P61550 626 aa14.96□□□□□ -0.02
PTPN21-208ENST00000556564 ARF6P62330 175 aa14.96□□□□□ -0.02
PTPN21-208ENST00000556564 OR5M8Q8NGP6 311 aa14.96□□□□□ -0.02
PTPN21-208ENST00000556564 TANC1Q9C0D5 1861 aa14.96□□□□□ -0.02
PTPN21-208ENST00000556564 IGHV1-2P23083 117 aa14.96□□□□□ -0.02
PTPN21-208ENST00000556564 CLEC9AQ6UXN8 241 aa14.96□□□□□ -0.02
PTPN21-208ENST00000556564 MIOXQ9UGB7 285 aa14.96□□□□□ -0.02
PTPN21-208ENST00000556564 LOC105371242A0A075B767 164 aa14.95□□□□□ -0.02
PTPN21-208ENST00000556564 A0A1W2PP11 408 aa14.95□□□□□ -0.02
PTPN21-208ENST00000556564 GNG7O60262 68 aa14.95□□□□□ -0.02
PTPN21-208ENST00000556564 SSX7Q7RTT5 188 aa14.95□□□□□ -0.02
PTPN21-208ENST00000556564 PPIAL4CA0A0B4J2A2 164 aa14.95□□□□□ -0.02
PTPN21-208ENST00000556564 PPIAL4GP0DN37 164 aa14.95□□□□□ -0.02
PTPN21-208ENST00000556564 PSG2P11465 335 aa14.95□□□□□ -0.02
PTPN21-208ENST00000556564 RPL7L1Q6DKI1 246 aaKnown RBP14.95□□□□□ -0.02
PTPN21-208ENST00000556564 OR5R1Q8NH85 324 aa14.95□□□□□ -0.02
PTPN21-208ENST00000556564 MRGPRFQ96AM1 343 aa14.95□□□□□ -0.02
PTPN21-208ENST00000556564 ASCL3Q9NQ33 180 aa14.95□□□□□ -0.02
PTPN21-208ENST00000556564 PARP11Q9NR21 331 aa14.95□□□□□ -0.02
PTPN21-208ENST00000556564 BCL2L11O43521 198 aa14.95□□□□□ -0.02
PTPN21-208ENST00000556564 H3F3AP84243 136 aa14.95□□□□□ -0.02
PTPN21-208ENST00000556564 BTN1A1Q13410 526 aa14.95□□□□□ -0.02
PTPN21-208ENST00000556564 LINC00470Q9BZP3 86 aa14.95□□□□□ -0.02
PTPN21-208ENST00000556564 SPRR3Q9UBC9 169 aa14.95□□□□□ -0.02
PTPN21-208ENST00000556564 NDUFA6P56556 154 aa14.95□□□□□ -0.02
PTPN21-208ENST00000556564 POLR2GP62487 172 aaKnown RBP eCLIP14.95□□□□□ -0.02
PTPN21-208ENST00000556564 FAM3AP98173 230 aa14.94□□□□□ -0.02
PTPN21-208ENST00000556564 ZNF260Q3ZCT1 412 aa14.94□□□□□ -0.02
PTPN21-208ENST00000556564 PRDM14Q9GZV8 571 aa14.94□□□□□ -0.02
PTPN21-208ENST00000556564 ZNF331Q9NQX6 463 aaPredicted RBP14.94□□□□□ -0.02
PTPN21-208ENST00000556564 IFNL4K9M1U5 179 aa14.94□□□□□ -0.02
PTPN21-208ENST00000556564 ADAP1O75689 374 aa14.94□□□□□ -0.02
PTPN21-208ENST00000556564 THY1P04216 161 aa14.94□□□□□ -0.02
PTPN21-208ENST00000556564 CECR9P0C854 216 aa14.94□□□□□ -0.02
PTPN21-208ENST00000556564 ABHD14BQ96IU4 210 aa14.94□□□□□ -0.02
PTPN21-208ENST00000556564 GAB2Q9UQC2 676 aa14.94□□□□□ -0.02
PTPN21-208ENST00000556564 LHX2P50458 406 aa14.94□□□□□ -0.02
PTPN21-208ENST00000556564 ADAD2Q8NCV1 583 aaKnown RBP14.94□□□□□ -0.02
PTPN21-208ENST00000556564 SNX22Q96L94 193 aa14.94□□□□□ -0.02
PTPN21-208ENST00000556564 TXN2Q99757 166 aa14.94□□□□□ -0.02
PTPN21-208ENST00000556564 NUDT16L1Q9BRJ7 211 aaKnown RBP14.94□□□□□ -0.02
PTPN21-208ENST00000556564 NAGKQ9UJ70 344 aa14.94□□□□□ -0.02
PTPN21-208ENST00000556564 RNF24Q9Y225 148 aa14.94□□□□□ -0.02
PTPN21-208ENST00000556564 RAB29O14966 203 aa14.94□□□□□ -0.02
PTPN21-208ENST00000556564 BAP18Q8IXM2 172 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms