RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 RIMS4Q9H426 269 aaPredicted RBP15.45■□□□□ 0.06
SDR39U1-220ENST00000556548 TRAPPC2LQ9UL33 140 aa15.45■□□□□ 0.06
SDR39U1-220ENST00000556548 IGKV1D-13A0A0B4J2D9 117 aa15.45■□□□□ 0.06
SDR39U1-220ENST00000556548 C1QTNF9BB2RNN3 333 aa15.45■□□□□ 0.06
SDR39U1-220ENST00000556548 DIRAS3O95661 229 aa15.45■□□□□ 0.06
SDR39U1-220ENST00000556548 PTBP3O95758 552 aaKnown RBP15.45■□□□□ 0.06
SDR39U1-220ENST00000556548 C1QTNF9P0C862 333 aa15.45■□□□□ 0.06
SDR39U1-220ENST00000556548 IGKV1-13P0DP09 117 aa15.45■□□□□ 0.06
SDR39U1-220ENST00000556548 CD40P25942 277 aa15.45■□□□□ 0.06
SDR39U1-220ENST00000556548 ZNF600Q6ZNG1 722 aa15.45■□□□□ 0.06
SDR39U1-220ENST00000556548 MS4A7Q9GZW8 240 aaPredicted RBP15.45■□□□□ 0.06
SDR39U1-220ENST00000556548 NAA60Q9H7X0 242 aa15.45■□□□□ 0.06
SDR39U1-220ENST00000556548 HES4Q9HCC6 221 aa15.45■□□□□ 0.06
SDR39U1-220ENST00000556548 MBD2Q9UBB5 411 aa15.45■□□□□ 0.06
SDR39U1-220ENST00000556548 A0A0B4J2A0 478 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 TRGV8A0A0C4DH27 118 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 PSMB6P28072 239 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 GNRHRP30968 328 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 SRSF7Q16629 238 aaKnown RBP eCLIP15.44■□□□□ 0.062e-7■■□□□ 11.4
SDR39U1-220ENST00000556548 ACP7Q6ZNF0 438 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 C1orf174Q8IYL3 243 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 CLRN3Q8NCR9 226 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 THAP6Q8TBB0 222 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 LRRC29Q8WV35 223 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 SHPKQ9UHJ6 478 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 KCNIP3Q9Y2W7 256 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 ICE1Q9Y2F5 2266 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 ATRXP46100 2492 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 HSD17B6O14756 317 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 RPA2P15927 270 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 RBPJQ06330 500 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 FIP1L1Q6UN15 594 aaKnown RBP15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 ZNF497Q6ZNH5 498 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 PIK3IP1Q96FE7 263 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 RSRP1Q9BUV0 290 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 MRPL37Q9BZE1 423 aaKnown RBP15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 TLNRD1Q9H1K6 362 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 MED9Q9NWA0 146 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 OR1A1Q9P1Q5 309 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 METRNQ9UJH8 293 aa15.44■□□□□ 0.06
SDR39U1-220ENST00000556548 MEX3AA1L020 520 aaKnown RBP15.43■□□□□ 0.06
SDR39U1-220ENST00000556548 IGHV3-13P01766 116 aa15.43■□□□□ 0.06
SDR39U1-220ENST00000556548 GLAP06280 429 aa15.43■□□□□ 0.06
SDR39U1-220ENST00000556548 C4BPBP20851 252 aa15.43■□□□□ 0.06
SDR39U1-220ENST00000556548 HLA-DRB3P79483 266 aa15.43■□□□□ 0.06
SDR39U1-220ENST00000556548 PCSK4Q6UW60 755 aa15.43■□□□□ 0.06
SDR39U1-220ENST00000556548 FOXRED2Q8IWF2 684 aa15.43■□□□□ 0.06
SDR39U1-220ENST00000556548 MRPL24Q96A35 216 aaKnown RBP15.43■□□□□ 0.06
SDR39U1-220ENST00000556548 NMES1Q9C002 83 aa15.43■□□□□ 0.06
SDR39U1-220ENST00000556548 TAAR3PQ9P1P4 343 aa15.43■□□□□ 0.06
SDR39U1-220ENST00000556548 ARID1AO14497 2285 aa15.43■□□□□ 0.06
SDR39U1-220ENST00000556548 F8W036 122 aa15.43■□□□□ 0.06
SDR39U1-220ENST00000556548 ABCD4O14678 606 aa15.43■□□□□ 0.06
SDR39U1-220ENST00000556548 UCP3P55916 312 aa15.43■□□□□ 0.06
SDR39U1-220ENST00000556548 SNTB1Q13884 538 aaKnown RBP15.43■□□□□ 0.06
SDR39U1-220ENST00000556548 ZNF880Q6PDB4 577 aa15.43■□□□□ 0.06
SDR39U1-220ENST00000556548 ZNF818PQ6ZRF7 136 aa15.43■□□□□ 0.06
SDR39U1-220ENST00000556548 ZNF565Q8N9K5 539 aa15.43■□□□□ 0.06
SDR39U1-220ENST00000556548 OR2V2Q96R30 315 aa15.43■□□□□ 0.06
SDR39U1-220ENST00000556548 SLC5A7Q9GZV3 580 aa15.43■□□□□ 0.06
SDR39U1-220ENST00000556548 TNFSF18Q9UNG2 199 aa15.43■□□□□ 0.06
SDR39U1-220ENST00000556548 TRBV6-6A0A0A6YYG2 114 aa15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 PHF1O43189 567 aaPredicted RBP15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 RP2O75695 350 aa15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 SLC25A4P12235 298 aa15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 TMEM187Q14656 261 aa15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 C3orf36Q3SXR2 165 aa15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 GAPTQ8N292 157 aa15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 OR10J5Q8NHC4 309 aa15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 RND1Q92730 232 aa15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 VRK1Q99986 396 aaPredicted RBP15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 ELOVL5Q9NYP7 299 aa15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 A8MXK9 166 aa15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 H0YIZ8 118 aa15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 TNFSF12O43508 249 aa15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 EGR1P18146 543 aa15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 MDH2P40926 338 aaKnown RBP15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 AKR1D1P51857 326 aa15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 AESQ08117 197 aa15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 GGNBP1Q5YKI7 109 aa15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 MEX3BQ6ZN04 569 aaKnown RBP15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 LDLRAD3Q86YD5 345 aa15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 OR4A4PQ8NGN8 299 aa15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 DCUN1D4Q92564 292 aa15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 C2orf50Q96LR7 162 aa15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 TP53RKQ96S44 253 aa15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 CCL28Q9NRJ3 127 aa15.42■□□□□ 0.06
SDR39U1-220ENST00000556548 THBDP07204 575 aa15.41■□□□□ 0.06
SDR39U1-220ENST00000556548 ACAA1P09110 424 aaPredicted RBP15.41■□□□□ 0.06
SDR39U1-220ENST00000556548 RPL35P42766 123 aaKnown RBP15.41■□□□□ 0.06
SDR39U1-220ENST00000556548 S100A10P60903 97 aa15.41■□□□□ 0.06
SDR39U1-220ENST00000556548 CYCSP99999 105 aaKnown RBP15.41■□□□□ 0.06
SDR39U1-220ENST00000556548 RAB32Q13637 225 aa15.41■□□□□ 0.06
SDR39U1-220ENST00000556548 IAH1Q2TAA2 248 aaPredicted RBP15.41■□□□□ 0.06
SDR39U1-220ENST00000556548 LYZL2Q7Z4W2 148 aa15.41■□□□□ 0.06
SDR39U1-220ENST00000556548 MOGAT3Q86VF5 341 aa15.41■□□□□ 0.06
SDR39U1-220ENST00000556548 TPRX1Q8N7U7 411 aa15.41■□□□□ 0.06
SDR39U1-220ENST00000556548 RNF126Q9BV68 326 aa15.41■□□□□ 0.06
SDR39U1-220ENST00000556548 TREM2Q9NZC2 230 aa15.41■□□□□ 0.06
SDR39U1-220ENST00000556548 CHD3Q12873 2000 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms