RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 C17orf58Q2M2W7 97 aa14.3□□□□□ -0.12
TUBB3-211ENST00000556536 CR1LQ2VPA4 569 aa14.3□□□□□ -0.12
TUBB3-211ENST00000556536 FAHD2BQ6P2I3 314 aaPredicted RBP14.3□□□□□ -0.12
TUBB3-211ENST00000556536 ZNF880Q6PDB4 577 aa14.3□□□□□ -0.12
TUBB3-211ENST00000556536 BTNL3Q6UXE8 466 aa14.3□□□□□ -0.12
TUBB3-211ENST00000556536 C11orf42Q8N5U0 333 aa14.3□□□□□ -0.12
TUBB3-211ENST00000556536 Q8N7P7 452 aa14.3□□□□□ -0.12
TUBB3-211ENST00000556536 OR4M2Q8NGB6 313 aa14.3□□□□□ -0.12
TUBB3-211ENST00000556536 UBALD1Q8TB05 177 aa14.3□□□□□ -0.12
TUBB3-211ENST00000556536 SETD6Q8TBK2 473 aa14.3□□□□□ -0.12
TUBB3-211ENST00000556536 MAFIPQ8WZ33 124 aa14.3□□□□□ -0.12
TUBB3-211ENST00000556536 FAHD2AQ96GK7 314 aa14.3□□□□□ -0.12
TUBB3-211ENST00000556536 ZNF714Q96N38 554 aa14.3□□□□□ -0.12
TUBB3-211ENST00000556536 ABHD1Q96SE0 405 aa14.3□□□□□ -0.12
TUBB3-211ENST00000556536 SOSTQ9BQB4 213 aa14.3□□□□□ -0.12
TUBB3-211ENST00000556536 RIMS4Q9H426 269 aaPredicted RBP14.3□□□□□ -0.12
TUBB3-211ENST00000556536 MBNL3Q9NUK0 354 aaKnown RBP14.3□□□□□ -0.12
TUBB3-211ENST00000556536 ZNF230Q9UIE0 474 aaPredicted RBP14.3□□□□□ -0.12
TUBB3-211ENST00000556536 MEIOCA2RUB1 952 aa14.29□□□□□ -0.12
TUBB3-211ENST00000556536 MMP23AO75900 390 aa14.29□□□□□ -0.12
TUBB3-211ENST00000556536 FCGR3AP08637 254 aa14.29□□□□□ -0.12
TUBB3-211ENST00000556536 SSTR5P35346 364 aa14.29□□□□□ -0.12
TUBB3-211ENST00000556536 DLX1P56177 255 aa14.29□□□□□ -0.12
TUBB3-211ENST00000556536 MRPS15P82914 257 aaKnown RBP14.29□□□□□ -0.12
TUBB3-211ENST00000556536 CCDC190Q86UF4 302 aa14.29□□□□□ -0.12
TUBB3-211ENST00000556536 PRIMA1Q86XR5 153 aa14.29□□□□□ -0.12
TUBB3-211ENST00000556536 KIR3DL3Q8N743 410 aa14.29□□□□□ -0.12
TUBB3-211ENST00000556536 ZNF565Q8N9K5 539 aa14.29□□□□□ -0.12
TUBB3-211ENST00000556536 SPATA3Q8NHX4 192 aa14.29□□□□□ -0.12
TUBB3-211ENST00000556536 TMPRSS13Q9BYE2 586 aa14.29□□□□□ -0.12
TUBB3-211ENST00000556536 SIRPDQ9H106 197 aa14.29□□□□□ -0.12
TUBB3-211ENST00000556536 Q9N2K0 584 aa14.29□□□□□ -0.12
TUBB3-211ENST00000556536 TAS2R3Q9NYW6 316 aa14.29□□□□□ -0.12
TUBB3-211ENST00000556536 CALYQ9NYX4 217 aa14.29□□□□□ -0.12
TUBB3-211ENST00000556536 KBTBD11-OT1A0A1B0GTJ5 212 aa14.28□□□□□ -0.12
TUBB3-211ENST00000556536 A0A1W2PPH5 198 aa14.28□□□□□ -0.12
TUBB3-211ENST00000556536 MEIS3P1A6NDR6 274 aa14.28□□□□□ -0.12
TUBB3-211ENST00000556536 ARHGAP32A7KAX9 2087 aa14.28□□□□□ -0.12
TUBB3-211ENST00000556536 C17orf98A8MV24 154 aa14.28□□□□□ -0.12
TUBB3-211ENST00000556536 C12orf77C9JDV5 145 aa14.28□□□□□ -0.12
TUBB3-211ENST00000556536 C15orf65H3BRN8 121 aa14.28□□□□□ -0.12
TUBB3-211ENST00000556536 LY6G6DO95868 133 aa14.28□□□□□ -0.12
TUBB3-211ENST00000556536 MMP9P14780 707 aa14.28□□□□□ -0.12
TUBB3-211ENST00000556536 PRSS3P35030 304 aa14.28□□□□□ -0.12
TUBB3-211ENST00000556536 GDNFP39905 211 aa14.28□□□□□ -0.12
TUBB3-211ENST00000556536 PRB3Q04118 309 aaPredicted RBP14.28□□□□□ -0.12
TUBB3-211ENST00000556536 PRAMEF5Q5TYX0 476 aa14.28□□□□□ -0.12
TUBB3-211ENST00000556536 RFESDQ8TAC1 157 aa14.28□□□□□ -0.12
TUBB3-211ENST00000556536 DMRTB1Q96MA1 342 aa14.28□□□□□ -0.12
TUBB3-211ENST00000556536 TAF9BQ9HBM6 251 aa14.28□□□□□ -0.12
TUBB3-211ENST00000556536 OPN4Q9UHM6 478 aa14.28□□□□□ -0.12
TUBB3-211ENST00000556536 KPTNQ9Y664 436 aa14.28□□□□□ -0.12
TUBB3-211ENST00000556536 V9GYH0 126 aa14.28□□□□□ -0.12
TUBB3-211ENST00000556536 ANK3Q12955 4377 aaKnown RBP14.28□□□□□ -0.12
TUBB3-211ENST00000556536 IGKV1D-8A0A087WSZ0 117 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 FABP12A6NFH5 140 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 ZNF729A6NN14 1252 aaPredicted RBP14.27□□□□□ -0.13
TUBB3-211ENST00000556536 M0R1W7 72 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 TPPPO94811 219 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 AVPP01185 164 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 GZMHP20718 246 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 OMGP23515 440 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 GATA3P23771 443 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 DTYMKP23919 212 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 PITPNAQ00169 270 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 IL18Q14116 193 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 HMGN3Q15651 99 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 RNASE12Q5GAN4 147 aaKnown RBP14.27□□□□□ -0.13
TUBB3-211ENST00000556536 C6orf183Q5T699 404 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 FAM131AQ6UXB0 335 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 BAIAP2L2Q6UXY1 529 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 GVQW1Q8N7I0 195 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 OR1L1Q8NH94 360 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 ARL11Q969Q4 196 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 TBX15Q96SF7 602 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 ST6GALNAC5Q9BVH7 336 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 GAL3ST2Q9H3Q3 398 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 C7orf69Q9H7B7 122 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 LINC00574Q9H8X3 128 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 AUP1Q9Y679 476 aa14.27□□□□□ -0.13
TUBB3-211ENST00000556536 NPIPB11E5RHQ5 1161 aa14.26□□□□□ -0.13
TUBB3-211ENST00000556536 J3QLI3 93 aa14.26□□□□□ -0.13
TUBB3-211ENST00000556536 ORC5O43913 435 aa14.26□□□□□ -0.13
TUBB3-211ENST00000556536 TOX4O94842 621 aa14.26□□□□□ -0.13
TUBB3-211ENST00000556536 HBZP02008 142 aa14.26□□□□□ -0.13
TUBB3-211ENST00000556536 FCER2P06734 321 aa14.26□□□□□ -0.13
TUBB3-211ENST00000556536 LTC4SQ16873 150 aa14.26□□□□□ -0.13
TUBB3-211ENST00000556536 UTF1Q5T230 341 aa14.26□□□□□ -0.13
TUBB3-211ENST00000556536 METTL11BQ5VVY1 283 aa14.26□□□□□ -0.13
TUBB3-211ENST00000556536 PYHIN1Q6K0P9 492 aa14.26□□□□□ -0.13
TUBB3-211ENST00000556536 ZNF782Q6ZMW2 699 aaPredicted RBP14.26□□□□□ -0.13
TUBB3-211ENST00000556536 C1orf229Q6ZS94 237 aaPredicted RBP14.26□□□□□ -0.13
TUBB3-211ENST00000556536 MOB1BQ7L9L4 216 aa14.26□□□□□ -0.13
TUBB3-211ENST00000556536 VMO1Q7Z5L0 202 aa14.26□□□□□ -0.13
TUBB3-211ENST00000556536 PRR18Q8N4B5 295 aa14.26□□□□□ -0.13
TUBB3-211ENST00000556536 GPX8Q8TED1 209 aa14.26□□□□□ -0.13
TUBB3-211ENST00000556536 OCSTAMPQ9BR26 566 aa14.26□□□□□ -0.13
TUBB3-211ENST00000556536 PCGF1Q9BSM1 259 aa14.26□□□□□ -0.13
TUBB3-211ENST00000556536 SIRT7Q9NRC8 400 aa14.26□□□□□ -0.13
TUBB3-211ENST00000556536 YAE1D1Q9NRH1 226 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms