RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 hCG_1809904A0A1W2PP81 198 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 A0A1W2PPE2 198 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 A0A1W2PPH5 198 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 A0A1W2PR64 198 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 A0A1W2PRV1 198 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-237ENST00000556274 TRIM77I1YAP6 450 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 TNFRSF13BO14836 293 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-237ENST00000556274 SIGLEC5O15389 551 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 CRTAPO75718 401 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-237ENST00000556274 PAHP00439 452 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 TK1P04183 234 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 CRYBA1P05813 215 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 IGHV4-38-2P0DP08 117 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 LYL1P12980 280 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 CPT2P23786 658 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 COX7A1P24310 79 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 CRHBPP24387 322 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 CFHR2P36980 270 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 PTGFRP43088 359 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 OR3A4PP47883 348 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 RPL31P62899 125 aaKnown RBP3.81□□□□□ -1.8
ATXN3-237ENST00000556274 AESQ08117 197 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 KLRD1Q13241 179 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 DYNC1I2Q13409 638 aaKnown RBP3.81□□□□□ -1.8
ATXN3-237ENST00000556274 INSL4Q14641 139 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 LTC4SQ16873 150 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 SLC22A6Q4U2R8 563 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 YIF1BQ5BJH7 314 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 PIK3CD-AS1Q5SR53 167 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 STUMQ69YW2 141 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 DMKNQ6E0U4 476 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-237ENST00000556274 Q8IYB0 196 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 PNKDQ8N490 385 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 PARP16Q8N5Y8 322 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 TPRX1Q8N7U7 411 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 OR4S1Q8NGB4 309 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 OR51A2Q8NGJ7 313 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 CCDC107Q8WV48 283 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 TMEM158Q8WZ71 300 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 RGP1Q92546 391 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-237ENST00000556274 SPSB1Q96BD6 273 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 C12orf43Q96C57 262 aaKnown RBP3.81□□□□□ -1.8
ATXN3-237ENST00000556274 SMIM19Q96E16 107 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 CPNE2Q96FN4 548 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-237ENST00000556274 ZNF184Q99676 751 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-237ENST00000556274 NRIP2Q9BQI9 281 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 DCTN5Q9BTE1 182 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 SUCNR1Q9BXA5 334 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 ANKRD60Q9BZ19 345 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 DNTTIP1Q9H147 329 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 PPA2Q9H2U2 334 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 BANF2Q9H503 90 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 NOX4Q9NPH5 578 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 TMEM138Q9NPI0 162 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 PCDHB16Q9NRJ7 776 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 PAK1IP1Q9NWT1 392 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-237ENST00000556274 IL36RNQ9UBH0 155 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 KAAG1Q9UBP8 84 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 OPN4Q9UHM6 478 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 MRPS28Q9Y2Q9 187 aaKnown RBP3.81□□□□□ -1.8
ATXN3-237ENST00000556274 MAB21L2Q9Y586 359 aa3.81□□□□□ -1.8
ATXN3-237ENST00000556274 TRAV8-7A0A075B6U6 113 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 TRAV39A0A0B4J263 110 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 IGHV1-69DA0A0B4J2H0 117 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 IGKV1-12A0A0C4DH73 117 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 CENPVL3A0A0U1RRI6 287 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 MDFIC2A0A1B0GVS7 189 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 SMIM31A0A1B0GVY4 71 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 MEIOCA2RUB1 952 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 FUOMA2VDF0 154 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 NPIPB5A8MRT5 1133 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 A8MXK9 166 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 K7N7A8 449 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 GABRPO00591 440 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 DENRO43583 198 aaKnown RBP3.8□□□□□ -1.8
ATXN3-237ENST00000556274 NOS1APO75052 506 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-237ENST00000556274 FCN3O75636 299 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 KDM4BO94953 1096 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 NDUFB8O95169 186 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 VENTXO95231 258 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 FSTL3O95633 263 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 OR2H2O95918 312 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 IGKV1D-12P01611 117 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 IGHV1-69P01742 117 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 ALDOBP05062 364 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 IGKV2-30P06310 120 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 CCL3L1P16619 93 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 SRMP19623 302 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 NFYBP25208 207 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 MAPK3P27361 379 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-237ENST00000556274 PSMB9P28065 219 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 CAV3P56539 151 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 RPS25P62851 125 aaKnown RBP3.8□□□□□ -1.8
ATXN3-237ENST00000556274 ACTG1P63261 375 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 SLC35A2P78381 396 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 ATXN7L3Q14CW9 347 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-237ENST00000556274 DEFB112Q30KQ8 113 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 PIGYQ3MUY2 71 aa3.8□□□□□ -1.8
ATXN3-237ENST00000556274 HSD17B12Q53GQ0 312 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms