RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 HAND1O96004 215 aa15.72■□□□□ 0.11
SDR39U1-218ENST00000556262 RBM39Q14498 530 aaKnown RBP15.72■□□□□ 0.11
SDR39U1-218ENST00000556262 ADIPOQQ15848 244 aa15.72■□□□□ 0.11
SDR39U1-218ENST00000556262 FBXL19-AS1Q494R0 122 aa15.72■□□□□ 0.11
SDR39U1-218ENST00000556262 SMUG1Q53HV7 270 aa15.72■□□□□ 0.11
SDR39U1-218ENST00000556262 SPIN3Q5JUX0 258 aa15.72■□□□□ 0.11
SDR39U1-218ENST00000556262 ITLN1Q8WWA0 313 aa15.72■□□□□ 0.11
SDR39U1-218ENST00000556262 RNASE6Q93091 150 aaKnown RBP15.72■□□□□ 0.11
SDR39U1-218ENST00000556262 CXorf58Q96LI9 332 aa15.72■□□□□ 0.11
SDR39U1-218ENST00000556262 RTBDNQ9BSG5 229 aaPredicted RBP15.72■□□□□ 0.11
SDR39U1-218ENST00000556262 RAB18Q9NP72 206 aa15.72■□□□□ 0.11
SDR39U1-218ENST00000556262 LRBAP50851 2863 aa15.72■□□□□ 0.11
SDR39U1-218ENST00000556262 RNF222A6NCQ9 220 aa15.71■□□□□ 0.11
SDR39U1-218ENST00000556262 CCSO14618 274 aa15.71■□□□□ 0.11
SDR39U1-218ENST00000556262 SPDEFO95238 335 aa15.71■□□□□ 0.11
SDR39U1-218ENST00000556262 SFT2D2O95562 160 aa15.71■□□□□ 0.11
SDR39U1-218ENST00000556262 SCTP09683 121 aa15.71■□□□□ 0.11
SDR39U1-218ENST00000556262 OR4A8P0C604 315 aa15.71■□□□□ 0.11
SDR39U1-218ENST00000556262 DHRS11Q6UWP2 260 aa15.71■□□□□ 0.11
SDR39U1-218ENST00000556262 MOGAT3Q86VF5 341 aa15.71■□□□□ 0.11
SDR39U1-218ENST00000556262 OR1S1Q8NH92 325 aa15.71■□□□□ 0.11
SDR39U1-218ENST00000556262 PLPPR1Q8TBJ4 325 aa15.71■□□□□ 0.11
SDR39U1-218ENST00000556262 CASTOR1Q8WTX7 329 aa15.71■□□□□ 0.11
SDR39U1-218ENST00000556262 VRK1Q99986 396 aaPredicted RBP15.71■□□□□ 0.11
SDR39U1-218ENST00000556262 DNTTIP1Q9H147 329 aa15.71■□□□□ 0.11
SDR39U1-218ENST00000556262 NGBQ9NPG2 151 aa15.71■□□□□ 0.11
SDR39U1-218ENST00000556262 RASL12Q9NYN1 266 aa15.71■□□□□ 0.11
SDR39U1-218ENST00000556262 GLAP06280 429 aa15.71■□□□□ 0.1
SDR39U1-218ENST00000556262 FGF2P09038 288 aa15.71■□□□□ 0.1
SDR39U1-218ENST00000556262 EGR1P18146 543 aa15.71■□□□□ 0.1
SDR39U1-218ENST00000556262 RCC1P18754 421 aaPredicted RBP15.71■□□□□ 0.1
SDR39U1-218ENST00000556262 TAGLNQ01995 201 aaKnown RBP15.71■□□□□ 0.1
SDR39U1-218ENST00000556262 ATXN7L3Q14CW9 347 aaPredicted RBP15.71■□□□□ 0.1
SDR39U1-218ENST00000556262 INO80EQ8NBZ0 244 aaPredicted RBP15.71■□□□□ 0.1
SDR39U1-218ENST00000556262 OR5T2Q8NGG2 359 aa15.71■□□□□ 0.1
SDR39U1-218ENST00000556262 CA5BP1Q8WTZ4 195 aa15.71■□□□□ 0.1
SDR39U1-218ENST00000556262 TMEM230Q96A57 120 aa15.71■□□□□ 0.1
SDR39U1-218ENST00000556262 PLPPR2Q96GM1 343 aa15.71■□□□□ 0.1
SDR39U1-218ENST00000556262 CACNA1BQ00975 2339 aa15.7■□□□□ 0.1
SDR39U1-218ENST00000556262 TRBV6-7A0A0A0MS04 114 aa15.7■□□□□ 0.1
SDR39U1-218ENST00000556262 TRAV39A0A0B4J263 110 aa15.7■□□□□ 0.1
SDR39U1-218ENST00000556262 BET1O15155 118 aa15.7■□□□□ 0.1
SDR39U1-218ENST00000556262 PSPNO60542 156 aa15.7■□□□□ 0.1
SDR39U1-218ENST00000556262 IGHV1-46P01743 117 aa15.7■□□□□ 0.1
SDR39U1-218ENST00000556262 RLN2P04090 185 aa15.7■□□□□ 0.1
SDR39U1-218ENST00000556262 PGAM2P15259 253 aa15.7■□□□□ 0.1
SDR39U1-218ENST00000556262 FCGR2CP31995 323 aa15.7■□□□□ 0.1
SDR39U1-218ENST00000556262 NUP62P37198 522 aaPredicted RBP15.7■□□□□ 0.1
SDR39U1-218ENST00000556262 FIP1L1Q6UN15 594 aaKnown RBP15.7■□□□□ 0.1
SDR39U1-218ENST00000556262 BOLLQ8N9W6 283 aaKnown RBP15.7■□□□□ 0.1
SDR39U1-218ENST00000556262 PRR7Q8TB68 274 aa15.7■□□□□ 0.1
SDR39U1-218ENST00000556262 NEUROG1Q92886 237 aa15.7■□□□□ 0.1
SDR39U1-218ENST00000556262 ESRP2Q9H6T0 727 aaKnown RBP15.7■□□□□ 0.1
SDR39U1-218ENST00000556262 SHISA9B4DS77 424 aa15.69■□□□□ 0.1
SDR39U1-218ENST00000556262 PSMB6P28072 239 aa15.69■□□□□ 0.1
SDR39U1-218ENST00000556262 NCMAPQ5T1S8 102 aa15.69■□□□□ 0.1
SDR39U1-218ENST00000556262 Q6ZS49 121 aa15.69■□□□□ 0.1
SDR39U1-218ENST00000556262 KCTD9Q7L273 389 aa15.69■□□□□ 0.1
SDR39U1-218ENST00000556262 DMRTC2Q8IXT2 367 aaPredicted RBP15.69■□□□□ 0.1
SDR39U1-218ENST00000556262 TOMM40LQ969M1 308 aa15.69■□□□□ 0.1
SDR39U1-218ENST00000556262 SEC22AQ96IW7 307 aa15.69■□□□□ 0.1
SDR39U1-218ENST00000556262 LINC00052Q96N35 136 aa15.69■□□□□ 0.1
SDR39U1-218ENST00000556262 ERRFI1Q9UJM3 462 aaPredicted RBP15.69■□□□□ 0.1
SDR39U1-218ENST00000556262 FAM25EA8MYX2 175 aa15.69■□□□□ 0.1
SDR39U1-218ENST00000556262 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.69■□□□□ 0.1
SDR39U1-218ENST00000556262 FXYD4P59646 89 aa15.69■□□□□ 0.1
SDR39U1-218ENST00000556262 HERPUD1Q15011 391 aa15.69■□□□□ 0.1
SDR39U1-218ENST00000556262 SMIM21Q3B7S5 101 aa15.69■□□□□ 0.1
SDR39U1-218ENST00000556262 ZCCHC24Q8N2G6 241 aaKnown RBP15.69■□□□□ 0.1
SDR39U1-218ENST00000556262 BVESQ8NE79 360 aa15.69■□□□□ 0.1
SDR39U1-218ENST00000556262 ARPC5LQ9BPX5 153 aa15.69■□□□□ 0.1
SDR39U1-218ENST00000556262 RIMS4Q9H426 269 aaPredicted RBP15.69■□□□□ 0.1
SDR39U1-218ENST00000556262 TREM2Q9NZC2 230 aa15.69■□□□□ 0.1
SDR39U1-218ENST00000556262 NDRG3Q9UGV2 375 aa15.69■□□□□ 0.1
SDR39U1-218ENST00000556262 METRNQ9UJH8 293 aa15.69■□□□□ 0.1
SDR39U1-218ENST00000556262 ABCA4P78363 2273 aa15.68■□□□□ 0.1
SDR39U1-218ENST00000556262 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.68■□□□□ 0.1
SDR39U1-218ENST00000556262 C5orf51A6NDU8 294 aa15.68■□□□□ 0.1
SDR39U1-218ENST00000556262 TRDCB7Z8K6 153 aa15.68■□□□□ 0.1
SDR39U1-218ENST00000556262 KNG1P01042 644 aa15.68■□□□□ 0.1
SDR39U1-218ENST00000556262 SERPINF1P36955 418 aa15.68■□□□□ 0.1
SDR39U1-218ENST00000556262 TNFAIP6P98066 277 aaPredicted RBP15.68■□□□□ 0.1
SDR39U1-218ENST00000556262 SRSF7Q16629 238 aaKnown RBP eCLIP15.68■□□□□ 0.12e-7■■□□□ 11.4
SDR39U1-218ENST00000556262 ZNF497Q6ZNH5 498 aa15.68■□□□□ 0.1
SDR39U1-218ENST00000556262 GCSAMQ8N6F7 178 aa15.68■□□□□ 0.1
SDR39U1-218ENST00000556262 GLS2Q9UI32 602 aa15.68■□□□□ 0.1
SDR39U1-218ENST00000556262 TRBV6-6A0A0A6YYG2 114 aa15.67■□□□□ 0.1
SDR39U1-218ENST00000556262 IGKV1-6A0A0C4DH72 117 aa15.67■□□□□ 0.1
SDR39U1-218ENST00000556262 SRRM5B3KS81 715 aa15.67■□□□□ 0.1
SDR39U1-218ENST00000556262 UQCRFS1P47985 274 aa15.67■□□□□ 0.1
SDR39U1-218ENST00000556262 SUPT4H1P63272 117 aaKnown RBP15.67■□□□□ 0.1
SDR39U1-218ENST00000556262 LRRC37A5PQ49AS3 106 aa15.67■□□□□ 0.1
SDR39U1-218ENST00000556262 KCNJ16Q9NPI9 418 aa15.67■□□□□ 0.1
SDR39U1-218ENST00000556262 DECR2Q9NUI1 292 aa15.67■□□□□ 0.1
SDR39U1-218ENST00000556262 PRR13Q9NZ81 148 aa15.67■□□□□ 0.1
SDR39U1-218ENST00000556262 MBD2Q9UBB5 411 aa15.67■□□□□ 0.1
SDR39U1-218ENST00000556262 IGHV3OR15-7A0A075B7D8 119 aa15.67■□□□□ 0.1
SDR39U1-218ENST00000556262 E7EQL1 145 aa15.67■□□□□ 0.1
SDR39U1-218ENST00000556262 LYL1P12980 280 aa15.67■□□□□ 0.1
SDR39U1-218ENST00000556262 AADACP22760 399 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms